Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS19105

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
4,319,333	-		PFLU_RS19100	0.17	+1.0
4,319,371	+		PFLU_RS19100	0.20	+0.4
4,319,436	+		PFLU_RS19100	0.26	+0.5
4,319,437	-		PFLU_RS19100	0.26	+0.1
4,319,590	+		PFLU_RS19100	0.40	-0.7
4,319,626	+		PFLU_RS19100	0.43	+0.5
4,319,627	-		PFLU_RS19100	0.43	+0.2
4,319,746	+		PFLU_RS19100	0.54	+1.0
4,319,747	-		PFLU_RS19100	0.54	+0.6
4,319,818	+		PFLU_RS19100	0.60	-0.5
4,319,819	-		PFLU_RS19100	0.60	+0.6
4,319,933	-		PFLU_RS19100	0.70	+1.3
4,319,998	-		PFLU_RS19100	0.76	+0.5
4,319,998	-		PFLU_RS19100	0.76	+1.4
4,320,258	+				+0.1
4,320,369	+				-0.0
4,320,426	+		PFLU_RS19105	0.15	-0.1
4,320,426	+		PFLU_RS19105	0.15	+1.8
4,320,427	-		PFLU_RS19105	0.16	+0.9
4,320,427	-		PFLU_RS19105	0.16	+0.0
4,320,427	-		PFLU_RS19105	0.16	+0.3
4,320,427	-		PFLU_RS19105	0.16	-0.2
4,320,427	-		PFLU_RS19105	0.16	+0.0
4,320,594	+		PFLU_RS19105	0.32	-0.5
4,320,594	+		PFLU_RS19105	0.32	-2.3
4,320,595	-		PFLU_RS19105	0.32	-0.7
4,320,595	-		PFLU_RS19105	0.32	+1.1
4,320,660	+		PFLU_RS19105	0.38	-0.6
4,320,661	-		PFLU_RS19105	0.38	+0.3
4,320,661	-		PFLU_RS19105	0.38	+1.0
4,320,661	-		PFLU_RS19105	0.38	-1.7
4,320,661	-		PFLU_RS19105	0.38	-1.3
4,320,675	+		PFLU_RS19105	0.40	+0.9
4,320,675	+		PFLU_RS19105	0.40	-0.3
4,320,675	+		PFLU_RS19105	0.40	-2.2
4,320,675	+		PFLU_RS19105	0.40	-1.5
4,320,676	-		PFLU_RS19105	0.40	-1.7
4,320,676	-		PFLU_RS19105	0.40	-0.6
4,320,676	-		PFLU_RS19105	0.40	+0.2
4,320,676	-		PFLU_RS19105	0.40	+2.2
4,320,684	+		PFLU_RS19105	0.41	+1.3
4,320,685	-		PFLU_RS19105	0.41	-0.4
4,320,799	-		PFLU_RS19105	0.52	+0.4
4,320,799	-		PFLU_RS19105	0.52	+0.3
4,320,810	+		PFLU_RS19105	0.53	-0.2
4,320,810	+		PFLU_RS19105	0.53	-0.5
4,320,810	+		PFLU_RS19105	0.53	+1.1
4,320,810	+		PFLU_RS19105	0.53	-0.3
4,320,811	-		PFLU_RS19105	0.53	+1.8
4,320,811	-		PFLU_RS19105	0.53	+0.3
4,320,811	-		PFLU_RS19105	0.53	-1.5
4,320,811	-		PFLU_RS19105	0.53	-0.2
4,320,811	-		PFLU_RS19105	0.53	-0.6
4,320,811	-		PFLU_RS19105	0.53	-0.9
4,320,811	-		PFLU_RS19105	0.53	+0.5
4,320,811	-		PFLU_RS19105	0.53	-0.0
4,320,925	+		PFLU_RS19105	0.64	-0.1
4,320,925	+		PFLU_RS19105	0.64	-1.4
4,321,152	+		PFLU_RS19105	0.86	-0.3
4,321,152	+		PFLU_RS19105	0.86	-0.1
4,321,152	+		PFLU_RS19105	0.86	+1.0
4,321,152	+		PFLU_RS19105	0.86	+1.0
4,321,152	+		PFLU_RS19105	0.86	+0.6
4,321,152	+		PFLU_RS19105	0.86	-2.4
4,321,153	-		PFLU_RS19105	0.86	-2.3
4,321,153	-		PFLU_RS19105	0.86	-0.4
4,321,153	-		PFLU_RS19105	0.86	-0.1
4,321,153	-		PFLU_RS19105	0.86	-0.8
4,321,153	-		PFLU_RS19105	0.86	-1.8
4,321,153	-		PFLU_RS19105	0.86	-1.1
4,321,153	-		PFLU_RS19105	0.86	+0.3
4,321,192	-		PFLU_RS19105	0.90	+0.9
4,321,192	-		PFLU_RS19105	0.90	-1.2
4,321,192	-		PFLU_RS19105	0.90	-1.3
4,321,305	+				-0.1
4,321,305	+				-1.1
4,321,305	+				+0.0
4,321,305	+				+1.9
4,321,305	+				+1.3
4,321,306	-				-0.2
4,321,381	-				+0.4
4,321,381	-				+0.7
4,321,428	-				-2.8
4,321,448	+				+1.3
4,321,448	+				+1.2
4,321,449	-				+0.8
4,321,449	-				-2.0
4,321,449	-				+1.2
4,321,449	-				-0.9
4,321,505	+				+0.4
4,321,505	+				-0.4
4,321,511	+				+0.5
4,321,512	-				+0.3
4,321,512	-				-0.4
4,321,530	+				-1.7
4,321,530	+				-0.8
4,321,530	+				+0.8
4,321,531	-				+1.2
4,321,531	-				-1.9
4,321,531	-				+0.5
4,321,531	-				-0.6
4,321,531	-				+0.3
4,321,531	-				-0.9
4,321,531	-				+0.7
4,321,531	-				-2.5
4,321,531	-				-0.5
4,321,552	+				-0.0
4,321,553	-				-1.3
4,321,598	+				-0.4
4,321,646	-				+0.6
4,321,664	+				-1.6
4,321,710	+				-1.0
4,321,710	+				-2.8
4,321,711	-				-1.2
4,321,711	-				+0.3
4,321,824	-		PFLU_RS19110	0.19	-2.2
4,321,845	+		PFLU_RS19110	0.21	+0.3
4,322,010	+		PFLU_RS19110	0.38	-1.6
4,322,010	+		PFLU_RS19110	0.38	-0.2
4,322,010	+		PFLU_RS19110	0.38	-0.4
4,322,010	+		PFLU_RS19110	0.38	+0.6
4,322,010	+		PFLU_RS19110	0.38	-0.9
4,322,010	+		PFLU_RS19110	0.38	-2.5
4,322,011	-		PFLU_RS19110	0.38	-0.3
4,322,063	+		PFLU_RS19110	0.43	+0.8
4,322,070	+		PFLU_RS19110	0.44	+1.0
4,322,070	+		PFLU_RS19110	0.44	+2.0
4,322,070	+		PFLU_RS19110	0.44	+0.6
4,322,070	+		PFLU_RS19110	0.44	+1.1
4,322,070	+		PFLU_RS19110	0.44	+0.7
4,322,070	+		PFLU_RS19110	0.44	-1.0
4,322,070	+		PFLU_RS19110	0.44	-1.4
4,322,070	+		PFLU_RS19110	0.44	+0.4
4,322,071	-		PFLU_RS19110	0.44	+1.2
4,322,071	-		PFLU_RS19110	0.44	-2.3
4,322,071	-		PFLU_RS19110	0.44	+0.8
4,322,071	-		PFLU_RS19110	0.44	-0.5
4,322,071	-		PFLU_RS19110	0.44	-1.7
4,322,071	-		PFLU_RS19110	0.44	+0.7
4,322,071	-		PFLU_RS19110	0.44	+0.2
4,322,071	-		PFLU_RS19110	0.44	+1.0
4,322,071	-		PFLU_RS19110	0.44	-0.8
4,322,094	+		PFLU_RS19110	0.46	+2.3
4,322,094	+		PFLU_RS19110	0.46	+0.3
4,322,095	-		PFLU_RS19110	0.46	+0.2
4,322,095	-		PFLU_RS19110	0.46	+1.0
4,322,097	+		PFLU_RS19110	0.47	-0.2
4,322,097	+		PFLU_RS19110	0.47	+0.0
4,322,098	-		PFLU_RS19110	0.47	-0.5
4,322,123	+		PFLU_RS19110	0.49	-1.9
4,322,123	+		PFLU_RS19110	0.49	-0.5
4,322,123	+		PFLU_RS19110	0.49	+0.8
4,322,124	-		PFLU_RS19110	0.49	+0.6
4,322,124	-		PFLU_RS19110	0.49	+1.9
4,322,124	-		PFLU_RS19110	0.49	+0.9
4,322,124	-		PFLU_RS19110	0.49	+0.8
4,322,124	-		PFLU_RS19110	0.49	-1.5
4,322,124	-		PFLU_RS19110	0.49	-0.2
4,322,124	-		PFLU_RS19110	0.49	-0.2
4,322,124	-		PFLU_RS19110	0.49	+0.6
4,322,168	+		PFLU_RS19110	0.54	+0.2
4,322,168	+		PFLU_RS19110	0.54	+1.4
4,322,168	+		PFLU_RS19110	0.54	-0.9
4,322,168	+		PFLU_RS19110	0.54	-0.3
4,322,168	+		PFLU_RS19110	0.54	-0.9
4,322,168	+		PFLU_RS19110	0.54	-0.9
4,322,168	+		PFLU_RS19110	0.54	+0.2
4,322,168	+		PFLU_RS19110	0.54	+0.1
4,322,168	+		PFLU_RS19110	0.54	-3.3
4,322,169	-		PFLU_RS19110	0.54	-1.6
4,322,169	-		PFLU_RS19110	0.54	+0.3
4,322,169	-		PFLU_RS19110	0.54	+2.3
4,322,169	-		PFLU_RS19110	0.54	-0.1
4,322,169	-		PFLU_RS19110	0.54	+0.6
4,322,169	-		PFLU_RS19110	0.54	-0.2
4,322,169	-		PFLU_RS19110	0.54	-0.3
4,322,169	-		PFLU_RS19110	0.54	-0.1
4,322,169	-		PFLU_RS19110	0.54	+0.1
4,322,172	+		PFLU_RS19110	0.54	+1.3
4,322,172	+		PFLU_RS19110	0.54	+0.8
4,322,172	+		PFLU_RS19110	0.54	+2.2
4,322,172	+		PFLU_RS19110	0.54	+0.7
4,322,173	-		PFLU_RS19110	0.54	+0.6
4,322,173	-		PFLU_RS19110	0.54	+0.0
4,322,173	-		PFLU_RS19110	0.54	-1.3