Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18810 and PFLU_RS18815 are separated by 112 nucleotides PFLU_RS18815 and PFLU_RS18820 overlap by 1 nucleotides PFLU_RS18820 and PFLU_RS18825 are separated by 13 nucleotides
PFLU_RS18810: PFLU_RS18810 - AMP-binding protein, at 4,252,697 to 4,253,599
_RS18810
PFLU_RS18815: PFLU_RS18815 - LLM class flavin-dependent oxidoreductase, at 4,253,712 to 4,255,145
_RS18815
PFLU_RS18820: PFLU_RS18820 - acyl-CoA dehydrogenase, at 4,255,145 to 4,255,471
_RS18820
PFLU_RS18825: PFLU_RS18825 - SfnB family sulfur acquisition oxidoreductase, at 4,255,485 to 4,256,681
_RS18825
Position (kb) 4253
4254
4255
4256 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4252.767 kb on + strand at 4252.768 kb on - strand at 4252.768 kb on - strand at 4253.169 kb on - strand, within PFLU_RS18810 at 4253.169 kb on - strand, within PFLU_RS18810 at 4253.192 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.448 kb on + strand, within PFLU_RS18810 at 4253.449 kb on - strand, within PFLU_RS18810 at 4253.599 kb on + strand at 4253.599 kb on + strand at 4253.615 kb on - strand at 4253.652 kb on + strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.769 kb on + strand at 4253.769 kb on + strand at 4253.770 kb on - strand at 4253.784 kb on + strand at 4253.858 kb on + strand, within PFLU_RS18815 at 4253.859 kb on - strand, within PFLU_RS18815 at 4253.870 kb on - strand, within PFLU_RS18815 at 4253.881 kb on + strand, within PFLU_RS18815 at 4253.882 kb on - strand, within PFLU_RS18815 at 4253.882 kb on - strand, within PFLU_RS18815 at 4253.954 kb on - strand, within PFLU_RS18815 at 4254.233 kb on - strand, within PFLU_RS18815 at 4254.233 kb on - strand, within PFLU_RS18815 at 4254.233 kb on - strand, within PFLU_RS18815 at 4254.241 kb on + strand, within PFLU_RS18815 at 4254.242 kb on - strand, within PFLU_RS18815 at 4254.251 kb on - strand, within PFLU_RS18815 at 4254.251 kb on - strand, within PFLU_RS18815 at 4254.251 kb on - strand, within PFLU_RS18815 at 4254.640 kb on + strand, within PFLU_RS18815 at 4254.641 kb on - strand, within PFLU_RS18815 at 4254.655 kb on + strand, within PFLU_RS18815 at 4254.655 kb on + strand, within PFLU_RS18815 at 4254.668 kb on - strand, within PFLU_RS18815 at 4254.733 kb on + strand, within PFLU_RS18815 at 4254.949 kb on + strand, within PFLU_RS18815 at 4254.949 kb on + strand, within PFLU_RS18815 at 4254.949 kb on + strand, within PFLU_RS18815 at 4254.950 kb on - strand, within PFLU_RS18815 at 4254.950 kb on - strand, within PFLU_RS18815 at 4254.950 kb on - strand, within PFLU_RS18815 at 4254.950 kb on - strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.958 kb on + strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4254.959 kb on - strand, within PFLU_RS18815 at 4255.048 kb on + strand at 4255.048 kb on + strand at 4255.048 kb on + strand at 4255.049 kb on - strand at 4255.049 kb on - strand at 4255.049 kb on - strand at 4255.049 kb on - strand at 4255.049 kb on - strand at 4255.049 kb on - strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.167 kb on + strand at 4255.168 kb on - strand at 4255.168 kb on - strand at 4255.168 kb on - strand at 4255.168 kb on - strand at 4255.168 kb on - strand at 4255.168 kb on - strand at 4255.172 kb on - strand at 4255.185 kb on + strand, within PFLU_RS18820 at 4255.186 kb on - strand, within PFLU_RS18820 at 4255.398 kb on + strand, within PFLU_RS18820 at 4255.398 kb on + strand, within PFLU_RS18820 at 4255.398 kb on + strand, within PFLU_RS18820 at 4255.398 kb on + strand, within PFLU_RS18820 at 4255.399 kb on - strand, within PFLU_RS18820 at 4255.477 kb on - strand at 4255.546 kb on + strand at 4255.546 kb on + strand at 4255.546 kb on + strand at 4255.546 kb on + strand at 4255.610 kb on + strand, within PFLU_RS18825 at 4255.610 kb on + strand, within PFLU_RS18825 at 4255.610 kb on + strand, within PFLU_RS18825 at 4255.611 kb on - strand, within PFLU_RS18825
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,252,767 + -0.9 4,252,768 - +1.5 4,252,768 - +1.6 4,253,169 - PFLU_RS18810 0.52 +1.1 4,253,169 - PFLU_RS18810 0.52 +0.5 4,253,192 + PFLU_RS18810 0.55 +0.5 4,253,214 + PFLU_RS18810 0.57 -0.7 4,253,214 + PFLU_RS18810 0.57 +0.0 4,253,214 + PFLU_RS18810 0.57 -0.5 4,253,214 + PFLU_RS18810 0.57 -0.4 4,253,215 - PFLU_RS18810 0.57 +0.3 4,253,215 - PFLU_RS18810 0.57 -0.4 4,253,215 - PFLU_RS18810 0.57 -0.8 4,253,215 - PFLU_RS18810 0.57 +2.3 4,253,215 - PFLU_RS18810 0.57 -1.3 4,253,448 + PFLU_RS18810 0.83 +0.4 4,253,449 - PFLU_RS18810 0.83 +0.3 4,253,599 + -1.9 4,253,599 + -0.1 4,253,615 - -1.7 4,253,652 + +0.0 4,253,673 - -1.2 4,253,673 - +0.1 4,253,673 - -0.0 4,253,673 - +0.4 4,253,673 - +1.1 4,253,673 - +0.2 4,253,769 + -0.1 4,253,769 + +0.3 4,253,770 - +1.3 4,253,784 + -0.9 4,253,858 + PFLU_RS18815 0.10 -0.1 4,253,859 - PFLU_RS18815 0.10 -0.1 4,253,870 - PFLU_RS18815 0.11 -0.0 4,253,881 + PFLU_RS18815 0.12 +0.8 4,253,882 - PFLU_RS18815 0.12 +0.8 4,253,882 - PFLU_RS18815 0.12 -1.6 4,253,954 - PFLU_RS18815 0.17 -0.7 4,254,233 - PFLU_RS18815 0.36 +0.2 4,254,233 - PFLU_RS18815 0.36 -0.6 4,254,233 - PFLU_RS18815 0.36 +1.1 4,254,241 + PFLU_RS18815 0.37 -0.5 4,254,242 - PFLU_RS18815 0.37 -0.3 4,254,251 - PFLU_RS18815 0.38 +1.5 4,254,251 - PFLU_RS18815 0.38 -1.1 4,254,251 - PFLU_RS18815 0.38 -0.1 4,254,640 + PFLU_RS18815 0.65 +1.2 4,254,641 - PFLU_RS18815 0.65 -0.6 4,254,655 + PFLU_RS18815 0.66 -0.6 4,254,655 + PFLU_RS18815 0.66 +0.3 4,254,668 - PFLU_RS18815 0.67 +0.5 4,254,733 + PFLU_RS18815 0.71 +0.4 4,254,949 + PFLU_RS18815 0.86 +1.3 4,254,949 + PFLU_RS18815 0.86 -1.7 4,254,949 + PFLU_RS18815 0.86 -0.1 4,254,950 - PFLU_RS18815 0.86 -1.1 4,254,950 - PFLU_RS18815 0.86 -0.5 4,254,950 - PFLU_RS18815 0.86 +1.7 4,254,950 - PFLU_RS18815 0.86 -0.4 4,254,958 + PFLU_RS18815 0.87 -1.5 4,254,958 + PFLU_RS18815 0.87 -0.7 4,254,958 + PFLU_RS18815 0.87 -0.4 4,254,958 + PFLU_RS18815 0.87 +0.6 4,254,958 + PFLU_RS18815 0.87 +1.2 4,254,958 + PFLU_RS18815 0.87 -1.0 4,254,958 + PFLU_RS18815 0.87 +0.7 4,254,958 + PFLU_RS18815 0.87 +0.7 4,254,958 + PFLU_RS18815 0.87 -3.1 4,254,958 + PFLU_RS18815 0.87 -1.0 4,254,958 + PFLU_RS18815 0.87 +0.0 4,254,958 + PFLU_RS18815 0.87 -2.2 4,254,958 + PFLU_RS18815 0.87 +1.3 4,254,958 + PFLU_RS18815 0.87 -0.8 4,254,958 + PFLU_RS18815 0.87 +1.8 4,254,959 - PFLU_RS18815 0.87 +0.5 4,254,959 - PFLU_RS18815 0.87 +1.3 4,254,959 - PFLU_RS18815 0.87 -1.9 4,254,959 - PFLU_RS18815 0.87 -0.8 4,254,959 - PFLU_RS18815 0.87 +0.1 4,254,959 - PFLU_RS18815 0.87 +0.3 4,254,959 - PFLU_RS18815 0.87 -0.9 4,254,959 - PFLU_RS18815 0.87 -0.2 4,254,959 - PFLU_RS18815 0.87 -2.4 4,254,959 - PFLU_RS18815 0.87 -3.0 4,255,048 + -1.0 4,255,048 + +0.7 4,255,048 + -0.1 4,255,049 - -0.6 4,255,049 - -0.5 4,255,049 - +0.3 4,255,049 - -1.3 4,255,049 - +1.6 4,255,049 - +0.3 4,255,167 + +0.3 4,255,167 + +0.8 4,255,167 + +1.1 4,255,167 + -0.3 4,255,167 + +0.4 4,255,167 + +0.2 4,255,167 + +0.1 4,255,167 + -1.7 4,255,167 + -0.4 4,255,167 + -2.3 4,255,167 + -1.3 4,255,167 + +1.1 4,255,168 - -1.0 4,255,168 - -0.2 4,255,168 - +0.2 4,255,168 - +0.5 4,255,168 - +0.4 4,255,168 - -3.3 4,255,172 - +1.0 4,255,185 + PFLU_RS18820 0.12 -0.1 4,255,186 - PFLU_RS18820 0.13 -0.3 4,255,398 + PFLU_RS18820 0.77 -2.3 4,255,398 + PFLU_RS18820 0.77 +0.0 4,255,398 + PFLU_RS18820 0.77 +0.3 4,255,398 + PFLU_RS18820 0.77 -1.3 4,255,399 - PFLU_RS18820 0.78 -1.9 4,255,477 - +1.3 4,255,546 + -0.9 4,255,546 + +0.0 4,255,546 + -0.3 4,255,546 + +1.9 4,255,610 + PFLU_RS18825 0.10 -2.1 4,255,610 + PFLU_RS18825 0.10 +1.3 4,255,610 + PFLU_RS18825 0.10 -1.1 4,255,611 - PFLU_RS18825 0.11 -0.8
Or see this region's nucleotide sequence