Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14260

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,194,396	+		PFLU_RS14255	0.46	-1.3
3,194,397	-		PFLU_RS14255	0.46	+0.2
3,194,643	+		PFLU_RS14255	0.63	+0.4
3,194,643	+		PFLU_RS14255	0.63	+0.4
3,194,685	+		PFLU_RS14255	0.66	-0.4
3,194,685	+		PFLU_RS14255	0.66	+0.7
3,194,685	+		PFLU_RS14255	0.66	+0.2
3,195,224	+				-0.4
3,195,225	-				+0.1
3,195,225	-				-0.4
3,195,238	+				+0.2
3,195,238	+				+0.6
3,195,242	+				-0.8
3,195,242	+				-0.3
3,195,242	+				+0.2
3,195,242	+				-1.5
3,195,243	+				+0.4
3,195,243	-				+0.0
3,195,243	-				+0.9
3,195,243	-				-0.8
3,195,243	-				+0.2
3,195,462	+				-0.6
3,195,498	+		PFLU_RS14260	0.11	+2.2
3,195,498	+		PFLU_RS14260	0.11	-1.7
3,195,499	-		PFLU_RS14260	0.11	+0.0
3,195,499	-		PFLU_RS14260	0.11	-1.8
3,195,523	+		PFLU_RS14260	0.11	-0.4
3,195,641	+		PFLU_RS14260	0.15	-1.5
3,195,673	+		PFLU_RS14260	0.16	+0.7
3,195,673	+		PFLU_RS14260	0.16	-1.0
3,195,674	-		PFLU_RS14260	0.16	-1.8
3,195,674	-		PFLU_RS14260	0.16	+1.5
3,195,725	+		PFLU_RS14260	0.18	-1.1
3,195,725	+		PFLU_RS14260	0.18	+0.4
3,195,746	+		PFLU_RS14260	0.18	+0.0
3,195,746	+		PFLU_RS14260	0.18	+0.7
3,195,747	-		PFLU_RS14260	0.18	-0.8
3,195,747	-		PFLU_RS14260	0.18	-0.0
3,195,815	+		PFLU_RS14260	0.21	-2.2
3,195,815	+		PFLU_RS14260	0.21	-0.6
3,195,815	+		PFLU_RS14260	0.21	-1.8
3,195,816	-		PFLU_RS14260	0.21	+0.3
3,195,863	+		PFLU_RS14260	0.22	+0.9
3,195,863	+		PFLU_RS14260	0.22	+1.2
3,195,863	+		PFLU_RS14260	0.22	+0.2
3,195,864	-		PFLU_RS14260	0.22	+2.0
3,195,864	-		PFLU_RS14260	0.22	-0.7
3,195,864	-		PFLU_RS14260	0.22	-0.1
3,195,907	-		PFLU_RS14260	0.23	+1.2
3,195,907	-		PFLU_RS14260	0.23	+0.8
3,196,014	-		PFLU_RS14260	0.27	+1.3
3,196,014	-		PFLU_RS14260	0.27	-0.4
3,196,014	-		PFLU_RS14260	0.27	+1.0
3,196,046	+		PFLU_RS14260	0.28	+0.5
3,196,046	+		PFLU_RS14260	0.28	+0.3
3,196,046	+		PFLU_RS14260	0.28	-1.2
3,196,046	+		PFLU_RS14260	0.28	+0.4
3,196,046	+		PFLU_RS14260	0.28	+0.8
3,196,047	-		PFLU_RS14260	0.28	+1.2
3,196,047	-		PFLU_RS14260	0.28	+2.1
3,196,047	-		PFLU_RS14260	0.28	-2.0
3,196,047	-		PFLU_RS14260	0.28	+0.9
3,196,061	+		PFLU_RS14260	0.28	+1.3
3,196,062	-		PFLU_RS14260	0.28	+2.2
3,196,062	-		PFLU_RS14260	0.28	+2.0
3,196,062	-		PFLU_RS14260	0.28	-1.7
3,196,062	-		PFLU_RS14260	0.28	-3.2
3,196,062	-		PFLU_RS14260	0.28	+0.0
3,196,160	+		PFLU_RS14260	0.31	-0.6
3,196,160	+		PFLU_RS14260	0.31	-1.1
3,196,160	+		PFLU_RS14260	0.31	-2.5
3,196,160	+		PFLU_RS14260	0.31	-0.6
3,196,161	-		PFLU_RS14260	0.31	-0.2
3,196,161	-		PFLU_RS14260	0.31	+0.4
3,196,229	+		PFLU_RS14260	0.34	-1.2
3,196,230	-		PFLU_RS14260	0.34	-0.4
3,196,230	-		PFLU_RS14260	0.34	+0.8
3,196,331	+		PFLU_RS14260	0.37	-0.3
3,196,331	+		PFLU_RS14260	0.37	-0.6
3,196,331	+		PFLU_RS14260	0.37	+0.3
3,196,331	+		PFLU_RS14260	0.37	-1.4
3,196,331	+		PFLU_RS14260	0.37	+0.2
3,196,332	-		PFLU_RS14260	0.37	-2.0
3,196,332	-		PFLU_RS14260	0.37	+0.7
3,196,332	-		PFLU_RS14260	0.37	-1.1
3,196,332	-		PFLU_RS14260	0.37	-1.6
3,196,332	-		PFLU_RS14260	0.37	+0.3
3,196,352	+		PFLU_RS14260	0.37	-1.7
3,196,352	+		PFLU_RS14260	0.37	+0.5
3,196,352	+		PFLU_RS14260	0.37	+1.1
3,196,353	-		PFLU_RS14260	0.37	+0.3
3,196,405	-		PFLU_RS14260	0.39	+1.8
3,196,604	+		PFLU_RS14260	0.45	-1.0
3,196,604	+		PFLU_RS14260	0.45	+0.9
3,196,604	+		PFLU_RS14260	0.45	-1.9
3,196,604	+		PFLU_RS14260	0.45	-0.5
3,196,683	-		PFLU_RS14260	0.48	-1.2
3,196,724	-		PFLU_RS14260	0.49	+1.3
3,196,737	-		PFLU_RS14260	0.49	-2.5
3,196,737	-		PFLU_RS14260	0.49	-1.0
3,196,936	-		PFLU_RS14260	0.56	-1.0
3,196,937	+		PFLU_RS14260	0.56	+0.6
3,196,937	+		PFLU_RS14260	0.56	+1.3
3,196,937	+		PFLU_RS14260	0.56	-0.9
3,196,937	+		PFLU_RS14260	0.56	-0.2
3,196,938	-		PFLU_RS14260	0.56	+0.8
3,196,938	-		PFLU_RS14260	0.56	+1.5
3,196,938	-		PFLU_RS14260	0.56	+2.1
3,197,137	+		PFLU_RS14260	0.62	-2.2
3,197,199	+		PFLU_RS14260	0.64	-0.4
3,197,272	+		PFLU_RS14260	0.66	+0.2
3,197,273	-		PFLU_RS14260	0.66	-3.5
3,197,354	+		PFLU_RS14260	0.69	+1.1
3,197,366	+		PFLU_RS14260	0.69	-1.2
3,197,366	+		PFLU_RS14260	0.69	+0.2
3,197,367	-		PFLU_RS14260	0.69	-2.0
3,197,790	-		PFLU_RS14260	0.83	-1.4
3,197,868	-		PFLU_RS14260	0.85	+1.2
3,197,868	-		PFLU_RS14260	0.85	-0.9
3,197,879	+		PFLU_RS14260	0.85	+0.7
3,197,879	+		PFLU_RS14260	0.85	+0.3
3,197,879	+		PFLU_RS14260	0.85	+0.0
3,197,879	+		PFLU_RS14260	0.85	+0.5
3,197,879	+		PFLU_RS14260	0.85	-3.0
3,197,880	-		PFLU_RS14260	0.85	+1.1
3,197,958	+		PFLU_RS14260	0.88	-1.5
3,198,107	+				-0.8
3,198,107	+				+1.2
3,198,107	+				-2.5
3,198,107	+				-0.1
3,198,107	+				-2.5
3,198,107	+				-1.4
3,198,107	+				+0.1
3,198,107	+				+1.8
3,198,107	+				-1.8
3,198,107	+				+0.4
3,198,108	-				+1.0
3,198,108	-				+1.4
3,198,108	-				+0.7
3,198,108	-				-0.3
3,198,108	-				+0.3
3,198,108	-				-0.8
3,198,108	-				+0.2
3,198,108	-				+1.1
3,198,108	-				+0.5
3,198,108	-				+0.2
3,198,108	-				-0.1
3,198,108	-				+1.0
3,198,108	-				+1.0
3,198,108	-				+0.5
3,198,108	-				-1.9
3,198,108	-				+1.1
3,198,108	-				-0.1
3,198,352	+				-0.3
3,198,710	+		PFLU_RS14265	0.28	-0.9
3,198,711	-		PFLU_RS14265	0.28	+2.6
3,198,744	-		PFLU_RS14265	0.31	+0.5
3,198,758	+		PFLU_RS14265	0.32	+1.1
3,198,758	+		PFLU_RS14265	0.32	-0.2
3,198,758	+		PFLU_RS14265	0.32	+0.1
3,198,758	+		PFLU_RS14265	0.32	+1.1
3,198,759	-		PFLU_RS14265	0.32	-0.6
3,198,759	-		PFLU_RS14265	0.32	+1.1
3,198,759	-		PFLU_RS14265	0.32	-2.5
3,198,759	-		PFLU_RS14265	0.32	+0.7
3,198,932	+		PFLU_RS14265	0.46	+1.4
3,198,932	+		PFLU_RS14265	0.46	+1.0
3,198,965	+		PFLU_RS14265	0.49	-1.3
3,198,965	+		PFLU_RS14265	0.49	-0.0
3,198,965	+		PFLU_RS14265	0.49	-1.5
3,198,966	-		PFLU_RS14265	0.49	-0.9
3,198,966	-		PFLU_RS14265	0.49	-2.4
3,198,971	+		PFLU_RS14265	0.49	-1.4