Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07375

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,639,800	+		PFLU_RS07370	0.41	+2.2
1,639,800	+		PFLU_RS07370	0.41	+0.1
1,639,800	+		PFLU_RS07370	0.41	+1.5
1,639,801	-		PFLU_RS07370	0.41	-0.4
1,639,801	-		PFLU_RS07370	0.41	-0.4
1,639,801	-		PFLU_RS07370	0.41	-0.8
1,639,801	-		PFLU_RS07370	0.41	+0.8
1,639,887	+		PFLU_RS07370	0.48	+0.7
1,639,888	-		PFLU_RS07370	0.48	+0.8
1,639,888	-		PFLU_RS07370	0.48	+0.1
1,639,888	-		PFLU_RS07370	0.48	-0.8
1,640,037	+		PFLU_RS07370	0.59	-1.1
1,640,037	+		PFLU_RS07370	0.59	-0.0
1,640,037	+		PFLU_RS07370	0.59	-2.1
1,640,037	+		PFLU_RS07370	0.59	+0.2
1,640,037	+		PFLU_RS07370	0.59	+1.7
1,640,037	+		PFLU_RS07370	0.59	+1.1
1,640,037	+		PFLU_RS07370	0.59	+1.3
1,640,037	+		PFLU_RS07370	0.59	-0.3
1,640,037	+		PFLU_RS07370	0.59	-0.2
1,640,037	+		PFLU_RS07370	0.59	-0.9
1,640,037	+		PFLU_RS07370	0.59	+1.8
1,640,037	+		PFLU_RS07370	0.59	+1.9
1,640,037	+		PFLU_RS07370	0.59	+0.4
1,640,037	+		PFLU_RS07370	0.59	+0.3
1,640,037	+		PFLU_RS07370	0.59	+0.3
1,640,037	+		PFLU_RS07370	0.59	-0.7
1,640,038	-		PFLU_RS07370	0.59	-0.2
1,640,038	-		PFLU_RS07370	0.59	+0.4
1,640,038	-		PFLU_RS07370	0.59	+0.6
1,640,038	-		PFLU_RS07370	0.59	-2.7
1,640,038	-		PFLU_RS07370	0.59	+0.3
1,640,038	-		PFLU_RS07370	0.59	-1.1
1,640,038	-		PFLU_RS07370	0.59	+0.3
1,640,038	-		PFLU_RS07370	0.59	-0.8
1,640,038	-		PFLU_RS07370	0.59	+1.1
1,640,038	-		PFLU_RS07370	0.59	-0.4
1,640,038	-		PFLU_RS07370	0.59	-1.1
1,640,038	-		PFLU_RS07370	0.59	+0.2
1,640,038	-		PFLU_RS07370	0.59	-0.9
1,640,038	-		PFLU_RS07370	0.59	-0.8
1,640,067	+		PFLU_RS07370	0.61	+1.1
1,640,067	+		PFLU_RS07370	0.61	-2.6
1,640,068	-		PFLU_RS07370	0.62	+0.5
1,640,068	-		PFLU_RS07370	0.62	-0.4
1,640,068	-		PFLU_RS07370	0.62	-3.3
1,640,073	+		PFLU_RS07370	0.62	-0.1
1,640,073	+		PFLU_RS07370	0.62	-0.0
1,640,073	+		PFLU_RS07370	0.62	-0.3
1,640,073	+		PFLU_RS07370	0.62	-1.2
1,640,074	-		PFLU_RS07370	0.62	-2.1
1,640,074	-		PFLU_RS07370	0.62	+1.4
1,640,241	+		PFLU_RS07370	0.75	-0.3
1,640,241	+		PFLU_RS07370	0.75	-0.2
1,640,242	-		PFLU_RS07370	0.75	-0.6
1,640,242	-		PFLU_RS07370	0.75	+0.8
1,640,242	-		PFLU_RS07370	0.75	+1.4
1,640,253	-		PFLU_RS07370	0.76	+1.5
1,640,319	+		PFLU_RS07370	0.80	+0.6
1,640,319	+		PFLU_RS07370	0.80	+0.7
1,640,319	+		PFLU_RS07370	0.80	-2.9
1,640,319	+		PFLU_RS07370	0.80	-1.4
1,640,320	-		PFLU_RS07370	0.81	-0.4
1,640,320	-		PFLU_RS07370	0.81	+0.6
1,640,320	-		PFLU_RS07370	0.81	-1.9
1,640,322	+		PFLU_RS07370	0.81	+0.1
1,640,322	+		PFLU_RS07370	0.81	-1.8
1,640,323	-		PFLU_RS07370	0.81	-1.8
1,640,323	-		PFLU_RS07370	0.81	+2.6
1,640,472	+				+0.3
1,640,473	-				+0.8
1,640,473	-				-3.1
1,640,473	-				-1.3
1,640,574	+				+0.8
1,640,574	+				+0.3
1,640,574	+				-0.7
1,640,575	-				+0.7
1,640,575	-				-0.1
1,640,575	-				-0.9
1,640,716	+				+0.4
1,640,717	-				+2.1
1,640,717	-				-0.0
1,640,717	-				-0.8
1,640,717	-				-0.0
1,640,800	+		PFLU_RS07375	0.13	-0.1
1,640,801	-		PFLU_RS07375	0.13	+1.0
1,640,833	+		PFLU_RS07375	0.15	+0.3
1,640,833	+		PFLU_RS07375	0.15	+2.9
1,640,833	+		PFLU_RS07375	0.15	-1.1
1,640,833	+		PFLU_RS07375	0.15	+0.2
1,640,833	+		PFLU_RS07375	0.15	-1.5
1,640,833	+		PFLU_RS07375	0.15	+0.4
1,640,833	+		PFLU_RS07375	0.15	-2.3
1,640,833	+		PFLU_RS07375	0.15	-2.7
1,640,833	+		PFLU_RS07375	0.15	-0.1
1,640,834	-		PFLU_RS07375	0.15	-0.3
1,640,834	-		PFLU_RS07375	0.15	-0.7
1,640,834	-		PFLU_RS07375	0.15	-0.1
1,640,834	-		PFLU_RS07375	0.15	-0.0
1,640,834	-		PFLU_RS07375	0.15	+1.1
1,640,834	-		PFLU_RS07375	0.15	+0.8
1,640,834	-		PFLU_RS07375	0.15	-0.2
1,640,965	+		PFLU_RS07375	0.25	-1.3
1,640,965	+		PFLU_RS07375	0.25	-0.4
1,640,965	+		PFLU_RS07375	0.25	+0.1
1,640,965	+		PFLU_RS07375	0.25	-0.1
1,640,965	+		PFLU_RS07375	0.25	+0.6
1,640,965	+		PFLU_RS07375	0.25	+1.3
1,640,965	+		PFLU_RS07375	0.25	+1.6
1,640,966	-		PFLU_RS07375	0.25	-0.8
1,640,966	-		PFLU_RS07375	0.25	-0.3
1,640,966	-		PFLU_RS07375	0.25	+0.6
1,640,966	-		PFLU_RS07375	0.25	+0.5
1,640,966	-		PFLU_RS07375	0.25	-0.8
1,641,026	-		PFLU_RS07375	0.30	-2.1
1,641,026	-		PFLU_RS07375	0.30	+0.5
1,641,026	-		PFLU_RS07375	0.30	+1.7
1,641,034	+		PFLU_RS07375	0.30	-1.3
1,641,035	-		PFLU_RS07375	0.30	+1.3
1,641,073	+		PFLU_RS07375	0.33	-0.7
1,641,074	-		PFLU_RS07375	0.33	+0.3
1,641,388	+		PFLU_RS07375	0.57	-1.0
1,641,388	+		PFLU_RS07375	0.57	+0.0
1,641,388	+		PFLU_RS07375	0.57	+0.8
1,641,389	-		PFLU_RS07375	0.57	-0.9
1,641,389	-		PFLU_RS07375	0.57	-1.1
1,641,408	+		PFLU_RS07375	0.59	+1.2
1,641,409	-		PFLU_RS07375	0.59	+0.4
1,641,409	-		PFLU_RS07375	0.59	+1.9
1,641,409	-		PFLU_RS07375	0.59	-0.7
1,641,409	-		PFLU_RS07375	0.59	+1.7
1,641,409	-		PFLU_RS07375	0.59	+0.7
1,641,412	+		PFLU_RS07375	0.59	+0.5
1,641,412	+		PFLU_RS07375	0.59	+0.6
1,641,412	+		PFLU_RS07375	0.59	-1.0
1,641,412	+		PFLU_RS07375	0.59	+0.3
1,641,412	+		PFLU_RS07375	0.59	+0.5
1,641,412	+		PFLU_RS07375	0.59	+0.4
1,641,412	+		PFLU_RS07375	0.59	-0.2
1,641,413	-		PFLU_RS07375	0.59	-2.2
1,641,413	-		PFLU_RS07375	0.59	+0.5
1,641,413	-		PFLU_RS07375	0.59	+0.8
1,641,413	-		PFLU_RS07375	0.59	-0.2
1,641,413	-		PFLU_RS07375	0.59	+0.7
1,641,413	-		PFLU_RS07375	0.59	+0.6
1,641,451	+		PFLU_RS07375	0.62	-0.7
1,641,524	+		PFLU_RS07375	0.67	+0.6
1,641,524	+		PFLU_RS07375	0.67	-0.2
1,641,525	-		PFLU_RS07375	0.67	-2.1
1,641,725	+		PFLU_RS07375	0.82	-0.7
1,641,725	+		PFLU_RS07375	0.82	-1.2
1,641,726	-		PFLU_RS07375	0.83	-1.0
1,641,726	-		PFLU_RS07375	0.83	-1.9
1,641,955	+				-1.3
1,641,955	+				-3.0
1,641,955	+				+0.4
1,641,955	+				-0.2
1,641,956	-				-1.5
1,641,956	-				-0.7
1,641,956	-				-0.3
1,641,956	-				-1.2
1,642,068	+		PFLU_RS31450	0.63	-0.3
1,642,068	+		PFLU_RS31450	0.63	+0.7
1,642,121	+		PFLU_RS31450	0.85	-1.6
1,642,121	+		PFLU_RS31450	0.85	+0.8
1,642,121	+		PFLU_RS31450	0.85	+0.1
1,642,121	+		PFLU_RS31450	0.85	+0.1
1,642,121	+		PFLU_RS31450	0.85	-0.0
1,642,121	+		PFLU_RS31450	0.85	-0.5
1,642,121	+		PFLU_RS31450	0.85	-2.1
1,642,122	-		PFLU_RS31450	0.85	-0.2
1,642,122	-		PFLU_RS31450	0.85	+0.5
1,642,122	-		PFLU_RS31450	0.85	-1.0
1,642,122	-		PFLU_RS31450	0.85	-0.8
1,642,122	-		PFLU_RS31450	0.85	-0.5
1,642,122	-		PFLU_RS31450	0.85	-0.1
1,642,123	+		PFLU_RS31450	0.86	-0.6
1,642,124	-		PFLU_RS31450	0.86	-1.0
1,642,158	-				+0.9
1,642,181	-				-0.1
1,642,234	+				+0.5
1,642,234	+				-0.0
1,642,234	+				+0.2
1,642,234	+				+0.7
1,642,630	-		PFLU_RS07380	0.45	-3.2
1,642,789	-		PFLU_RS07380	0.62	-0.5
1,642,789	-		PFLU_RS07380	0.62	+0.3
1,642,789	-		PFLU_RS07380	0.62	-2.8
1,642,789	-		PFLU_RS07380	0.62	-2.3
1,642,902	+		PFLU_RS07380	0.74	+0.3
1,642,903	-		PFLU_RS07380	0.74	-0.2
1,642,903	-		PFLU_RS07380	0.74	+0.3
1,642,903	-		PFLU_RS07380	0.74	-1.9
1,642,903	-		PFLU_RS07380	0.74	-1.3