Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06490

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,450,525	-		PFLU_RS06485	0.40	-0.1
1,450,557	-		PFLU_RS06485	0.42	-2.0
1,450,557	-		PFLU_RS06485	0.42	-0.1
1,450,557	-		PFLU_RS06485	0.42	-0.7
1,450,932	+		PFLU_RS06485	0.65	-0.4
1,450,932	+		PFLU_RS06485	0.65	-0.0
1,450,932	+		PFLU_RS06485	0.65	+1.2
1,450,932	+		PFLU_RS06485	0.65	-0.3
1,450,933	-		PFLU_RS06485	0.65	-0.7
1,450,945	+		PFLU_RS06485	0.66	+1.1
1,450,946	-		PFLU_RS06485	0.66	+0.6
1,451,217	+		PFLU_RS06485	0.83	+0.8
1,451,217	+		PFLU_RS06485	0.83	-0.9
1,451,217	+		PFLU_RS06485	0.83	-0.5
1,451,217	+		PFLU_RS06485	0.83	-3.9
1,451,217	+		PFLU_RS06485	0.83	-0.4
1,451,218	-		PFLU_RS06485	0.83	+0.5
1,451,274	+		PFLU_RS06485	0.86	-2.7
1,451,274	+		PFLU_RS06485	0.86	-1.4
1,451,275	-		PFLU_RS06485	0.86	-0.8
1,451,275	-		PFLU_RS06485	0.86	+2.3
1,451,275	-		PFLU_RS06485	0.86	+0.4
1,451,275	-		PFLU_RS06485	0.86	-0.7
1,451,275	-		PFLU_RS06485	0.86	+1.9
1,451,380	-				-0.5
1,451,380	-				-0.9
1,451,421	+				-1.2
1,451,421	+				+1.3
1,451,478	+				-0.3
1,451,478	+				+0.6
1,451,479	-				-0.6
1,451,479	-				-0.9
1,451,528	+				-2.2
1,451,584	+				+0.7
1,451,821	+		PFLU_RS06490	0.32	+0.4
1,451,856	-		PFLU_RS06490	0.36	-0.1
1,451,873	+		PFLU_RS06490	0.37	+1.3
1,451,873	+		PFLU_RS06490	0.37	-0.4
1,451,873	+		PFLU_RS06490	0.37	+0.0
1,451,873	+		PFLU_RS06490	0.37	+0.3
1,451,873	+		PFLU_RS06490	0.37	-1.5
1,451,873	+		PFLU_RS06490	0.37	+0.4
1,451,873	+		PFLU_RS06490	0.37	-0.3
1,451,873	+		PFLU_RS06490	0.37	+0.4
1,451,873	+		PFLU_RS06490	0.37	-0.2
1,451,873	+		PFLU_RS06490	0.37	+0.1
1,451,873	+		PFLU_RS06490	0.37	+1.6
1,451,873	+		PFLU_RS06490	0.37	+0.8
1,451,873	+		PFLU_RS06490	0.37	+0.8
1,451,873	+		PFLU_RS06490	0.37	+0.7
1,451,873	+		PFLU_RS06490	0.37	-2.8
1,451,873	+		PFLU_RS06490	0.37	-0.6
1,451,873	+		PFLU_RS06490	0.37	-0.1
1,451,873	+		PFLU_RS06490	0.37	+0.4
1,451,873	+		PFLU_RS06490	0.37	+0.7
1,451,873	+		PFLU_RS06490	0.37	+0.1
1,451,874	-		PFLU_RS06490	0.38	+0.6
1,451,874	-		PFLU_RS06490	0.38	+0.4
1,451,874	-		PFLU_RS06490	0.38	-3.1
1,451,874	-		PFLU_RS06490	0.38	+0.2
1,451,874	-		PFLU_RS06490	0.38	-2.5
1,451,874	-		PFLU_RS06490	0.38	+2.0
1,451,874	-		PFLU_RS06490	0.38	-0.6
1,451,874	-		PFLU_RS06490	0.38	-2.8
1,451,874	-		PFLU_RS06490	0.38	-1.4
1,451,874	-		PFLU_RS06490	0.38	-1.0
1,451,874	-		PFLU_RS06490	0.38	-2.1
1,451,874	-		PFLU_RS06490	0.38	+1.3
1,451,874	-		PFLU_RS06490	0.38	+0.5
1,451,874	-		PFLU_RS06490	0.38	+0.3
1,451,874	-		PFLU_RS06490	0.38	+1.3
1,451,874	-		PFLU_RS06490	0.38	-1.4
1,451,874	-		PFLU_RS06490	0.38	-1.0
1,451,874	-		PFLU_RS06490	0.38	+0.1
1,451,874	-		PFLU_RS06490	0.38	-0.5
1,451,892	-		PFLU_RS06490	0.39	+1.1
1,451,952	+		PFLU_RS06490	0.45	+0.4
1,451,953	-		PFLU_RS06490	0.45	-0.7
1,451,988	-		PFLU_RS06490	0.49	+0.7
1,451,988	-		PFLU_RS06490	0.49	+0.2
1,451,988	-		PFLU_RS06490	0.49	+0.4
1,452,080	+		PFLU_RS06490	0.58	-0.7
1,452,080	+		PFLU_RS06490	0.58	+0.5
1,452,080	+		PFLU_RS06490	0.58	+0.8
1,452,080	+		PFLU_RS06490	0.58	+0.0
1,452,080	+		PFLU_RS06490	0.58	+0.2
1,452,081	-		PFLU_RS06490	0.58	-1.1
1,452,081	-		PFLU_RS06490	0.58	+0.8
1,452,112	-		PFLU_RS06490	0.61	+0.9
1,452,151	-		PFLU_RS06490	0.65	-0.4
1,452,170	+		PFLU_RS06490	0.67	+0.7
1,452,170	+		PFLU_RS06490	0.67	-0.1
1,452,170	+		PFLU_RS06490	0.67	+0.8
1,452,171	-		PFLU_RS06490	0.67	-3.0
1,452,204	-		PFLU_RS06490	0.70	+0.0
1,452,256	+		PFLU_RS06490	0.76	+0.6
1,452,256	+		PFLU_RS06490	0.76	+0.3
1,452,257	-		PFLU_RS06490	0.76	+0.4
1,452,257	-		PFLU_RS06490	0.76	-1.3
1,452,274	+		PFLU_RS06490	0.77	+0.1
1,452,274	+		PFLU_RS06490	0.77	+0.2
1,452,274	+		PFLU_RS06490	0.77	-1.1
1,452,274	+		PFLU_RS06490	0.77	+1.5
1,452,275	-		PFLU_RS06490	0.77	-2.0
1,452,275	-		PFLU_RS06490	0.77	-0.1
1,452,275	-		PFLU_RS06490	0.77	+2.1
1,452,275	-		PFLU_RS06490	0.77	+0.9
1,452,275	-		PFLU_RS06490	0.77	-0.6
1,452,275	-		PFLU_RS06490	0.77	-0.9
1,452,290	+		PFLU_RS06490	0.79	+0.6
1,452,365	+		PFLU_RS06490	0.86	-1.2
1,452,365	+		PFLU_RS06490	0.86	-0.0
1,452,366	-		PFLU_RS06490	0.86	-1.0
1,452,366	-		PFLU_RS06490	0.86	-0.9
1,452,366	-		PFLU_RS06490	0.86	+0.5
1,452,366	-		PFLU_RS06490	0.86	+0.7
1,452,446	+				-1.0
1,452,447	-				-0.4
1,452,447	-				-1.0
1,452,447	-				+0.0
1,452,447	-				-1.0
1,452,525	+				+0.3
1,452,526	-				+0.8
1,452,532	+				+1.7
1,452,532	+				+0.9
1,452,533	-				-0.8
1,452,533	-				+1.2
1,452,533	-				-1.5
1,452,533	-				+0.5
1,452,533	-				+0.4
1,452,533	-				+1.4
1,452,533	-				+0.4
1,452,564	-				-0.6
1,452,567	+				+0.2
1,452,567	+				-1.4
1,452,567	+				+0.5
1,452,567	+				-0.4
1,452,567	+				+0.6
1,452,567	+				-0.4
1,452,567	+				+1.0
1,452,567	+				-2.1
1,452,568	-				-0.2
1,452,568	-				-2.8
1,452,568	-				-2.0
1,452,568	-				-0.4
1,452,568	-				+0.6
1,452,669	+				-0.5
1,452,669	+				+0.9
1,452,669	+				+0.0
1,452,670	-				+0.2
1,452,751	-				-2.3
1,452,751	-				+1.1
1,452,754	+				+0.3
1,452,786	+				+0.8
1,452,786	+				-0.3
1,452,787	-				+0.3
1,452,787	-				-2.5
1,452,828	+				+0.3
1,452,828	+				-1.7
1,452,828	+				+0.6
1,452,828	+				-0.4
1,452,828	+				+0.5
1,452,829	-				-0.5
1,452,864	+				+0.3
1,452,864	+				-1.2
1,452,864	+				+0.5
1,452,864	+				+0.9
1,452,864	+				+1.2
1,452,864	+				+0.0
1,452,864	+				+0.3
1,452,864	+				+1.6
1,452,864	+				+0.2
1,452,864	+				-0.1
1,452,865	-				-1.3
1,452,865	-				+1.3
1,452,865	-				-0.1
1,452,865	-				-1.3
1,452,865	-				+1.2
1,452,865	-				+0.3
1,452,865	-				+0.6
1,452,865	-				-1.8
1,452,865	-				+0.5
1,452,993	+				+0.8
1,452,994	-		PFLU_RS06495	0.10	-0.6
1,453,261	-		PFLU_RS06495	0.21	-1.4
1,453,366	-		PFLU_RS06495	0.25	-0.1