Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_13920 and OH686_13925 are separated by 185 nucleotides OH686_13925 and OH686_13930 are separated by 64 nucleotides OH686_13930 and OH686_13935 are separated by 116 nucleotides
OH686_13920: OH686_13920 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 2,913,545 to 2,914,036
_13920
OH686_13925: OH686_13925 - Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD, at 2,914,222 to 2,914,698
_13925
OH686_13930: OH686_13930 - hypothetical protein, at 2,914,763 to 2,915,401
_13930
OH686_13935: OH686_13935 - Alginate regulatory protein AlgP, positive transcriptional regulator of AlgD, at 2,915,518 to 2,916,696
_13935
Position (kb)
2914
2915
2916 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2914.091 kb on + strand at 2914.092 kb on - strand at 2914.092 kb on - strand at 2914.092 kb on - strand at 2914.103 kb on - strand at 2914.165 kb on + strand at 2914.165 kb on + strand at 2914.165 kb on + strand at 2914.166 kb on - strand at 2914.186 kb on + strand at 2914.186 kb on + strand at 2914.186 kb on + strand at 2914.186 kb on + strand at 2914.186 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.265 kb on + strand at 2914.266 kb on - strand at 2914.266 kb on - strand at 2914.266 kb on - strand at 2914.266 kb on - strand at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.399 kb on + strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.400 kb on - strand, within OH686_13925 at 2914.426 kb on + strand, within OH686_13925 at 2914.426 kb on + strand, within OH686_13925 at 2914.426 kb on + strand, within OH686_13925 at 2914.426 kb on + strand, within OH686_13925 at 2914.426 kb on + strand, within OH686_13925 at 2914.427 kb on - strand, within OH686_13925 at 2914.427 kb on - strand, within OH686_13925 at 2914.427 kb on - strand, within OH686_13925 at 2914.495 kb on + strand, within OH686_13925 at 2914.495 kb on + strand, within OH686_13925 at 2914.495 kb on + strand, within OH686_13925 at 2914.496 kb on - strand, within OH686_13925 at 2914.496 kb on - strand, within OH686_13925 at 2914.496 kb on - strand, within OH686_13925 at 2914.845 kb on + strand, within OH686_13930 at 2914.845 kb on + strand, within OH686_13930 at 2914.845 kb on + strand, within OH686_13930 at 2914.845 kb on + strand, within OH686_13930 at 2914.845 kb on + strand, within OH686_13930 at 2914.846 kb on - strand, within OH686_13930 at 2914.846 kb on - strand, within OH686_13930 at 2914.846 kb on - strand, within OH686_13930 at 2914.846 kb on - strand, within OH686_13930 at 2914.846 kb on - strand, within OH686_13930 at 2914.998 kb on + strand, within OH686_13930 at 2914.999 kb on - strand, within OH686_13930 at 2914.999 kb on - strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.051 kb on + strand, within OH686_13930 at 2915.052 kb on - strand, within OH686_13930 at 2915.052 kb on - strand, within OH686_13930 at 2915.052 kb on - strand, within OH686_13930 at 2915.052 kb on - strand, within OH686_13930 at 2915.052 kb on - strand, within OH686_13930 at 2915.052 kb on - strand, within OH686_13930 at 2915.066 kb on + strand, within OH686_13930 at 2915.066 kb on + strand, within OH686_13930 at 2915.066 kb on + strand, within OH686_13930 at 2915.067 kb on - strand, within OH686_13930 at 2915.067 kb on - strand, within OH686_13930 at 2915.067 kb on - strand, within OH686_13930 at 2915.067 kb on - strand, within OH686_13930 at 2915.067 kb on - strand, within OH686_13930 at 2915.270 kb on + strand, within OH686_13930 at 2915.270 kb on + strand, within OH686_13930 at 2915.271 kb on - strand, within OH686_13930 at 2915.271 kb on - strand, within OH686_13930 at 2915.271 kb on - strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.322 kb on + strand, within OH686_13930 at 2915.323 kb on - strand, within OH686_13930 at 2915.323 kb on - strand, within OH686_13930 at 2915.433 kb on + strand at 2915.433 kb on + strand at 2915.434 kb on - strand at 2915.434 kb on - strand at 2915.480 kb on + strand at 2915.480 kb on + strand at 2915.480 kb on + strand at 2915.480 kb on + strand at 2915.481 kb on - strand at 2915.481 kb on - strand at 2915.481 kb on - strand at 2915.481 kb on - strand at 2915.481 kb on - strand at 2915.481 kb on - strand at 2915.483 kb on + strand at 2915.484 kb on - strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.532 kb on + strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.533 kb on - strand at 2915.745 kb on + strand, within OH686_13935 at 2915.821 kb on + strand, within OH686_13935 at 2915.821 kb on + strand, within OH686_13935 at 2915.821 kb on + strand, within OH686_13935 at 2915.821 kb on + strand, within OH686_13935 at 2915.821 kb on + strand, within OH686_13935 at 2915.821 kb on + strand, within OH686_13935 at 2915.822 kb on - strand, within OH686_13935 at 2915.822 kb on - strand, within OH686_13935 at 2915.822 kb on - strand, within OH686_13935 at 2915.822 kb on - strand, within OH686_13935 at 2915.822 kb on - strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.885 kb on + strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2915.886 kb on - strand, within OH686_13935 at 2916.021 kb on + strand, within OH686_13935 at 2916.021 kb on + strand, within OH686_13935 at 2916.022 kb on - strand, within OH686_13935 at 2916.022 kb on - strand, within OH686_13935 at 2916.022 kb on - strand, within OH686_13935 at 2916.022 kb on - strand, within OH686_13935 at 2916.039 kb on + strand, within OH686_13935 at 2916.192 kb on + strand, within OH686_13935 at 2916.193 kb on - strand, within OH686_13935 at 2916.300 kb on + strand, within OH686_13935 at 2916.300 kb on + strand, within OH686_13935
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,914,091 + -0.9 2,914,092 - +0.7 2,914,092 - +0.3 2,914,092 - -0.3 2,914,103 - +0.4 2,914,165 + -0.5 2,914,165 + +0.8 2,914,165 + -1.0 2,914,166 - -0.2 2,914,186 + -0.2 2,914,186 + -1.8 2,914,186 + -0.5 2,914,186 + +0.5 2,914,186 + -0.3 2,914,265 + -0.6 2,914,265 + +0.8 2,914,265 + +0.6 2,914,265 + +0.2 2,914,265 + +0.7 2,914,265 + +0.8 2,914,265 + +0.1 2,914,265 + +0.7 2,914,265 + +0.6 2,914,265 + +0.4 2,914,265 + +0.5 2,914,265 + +0.0 2,914,265 + +0.8 2,914,266 - +0.6 2,914,266 - +0.5 2,914,266 - +0.2 2,914,266 - -0.1 2,914,399 + OH686_13925 0.37 +1.1 2,914,399 + OH686_13925 0.37 +0.4 2,914,399 + OH686_13925 0.37 -0.2 2,914,399 + OH686_13925 0.37 -0.0 2,914,399 + OH686_13925 0.37 -0.1 2,914,399 + OH686_13925 0.37 +1.5 2,914,399 + OH686_13925 0.37 +0.5 2,914,399 + OH686_13925 0.37 +0.8 2,914,399 + OH686_13925 0.37 +0.1 2,914,399 + OH686_13925 0.37 +0.3 2,914,399 + OH686_13925 0.37 +0.6 2,914,399 + OH686_13925 0.37 +0.2 2,914,399 + OH686_13925 0.37 +0.8 2,914,399 + OH686_13925 0.37 +0.9 2,914,399 + OH686_13925 0.37 +0.1 2,914,399 + OH686_13925 0.37 -0.3 2,914,399 + OH686_13925 0.37 -0.2 2,914,399 + OH686_13925 0.37 +0.2 2,914,399 + OH686_13925 0.37 +1.5 2,914,400 - OH686_13925 0.37 +0.7 2,914,400 - OH686_13925 0.37 -0.0 2,914,400 - OH686_13925 0.37 +0.7 2,914,400 - OH686_13925 0.37 +0.2 2,914,400 - OH686_13925 0.37 +0.1 2,914,400 - OH686_13925 0.37 +0.9 2,914,400 - OH686_13925 0.37 +0.6 2,914,400 - OH686_13925 0.37 -0.6 2,914,400 - OH686_13925 0.37 -0.3 2,914,400 - OH686_13925 0.37 +0.6 2,914,400 - OH686_13925 0.37 -0.2 2,914,400 - OH686_13925 0.37 +1.5 2,914,400 - OH686_13925 0.37 -0.0 2,914,400 - OH686_13925 0.37 +1.1 2,914,400 - OH686_13925 0.37 +1.7 2,914,400 - OH686_13925 0.37 +0.2 2,914,400 - OH686_13925 0.37 +0.9 2,914,400 - OH686_13925 0.37 +1.2 2,914,400 - OH686_13925 0.37 +0.3 2,914,426 + OH686_13925 0.43 -0.1 2,914,426 + OH686_13925 0.43 +0.3 2,914,426 + OH686_13925 0.43 +0.7 2,914,426 + OH686_13925 0.43 -0.4 2,914,426 + OH686_13925 0.43 +0.2 2,914,427 - OH686_13925 0.43 +0.6 2,914,427 - OH686_13925 0.43 +0.7 2,914,427 - OH686_13925 0.43 +0.3 2,914,495 + OH686_13925 0.57 +0.6 2,914,495 + OH686_13925 0.57 -0.6 2,914,495 + OH686_13925 0.57 +0.4 2,914,496 - OH686_13925 0.57 -0.2 2,914,496 - OH686_13925 0.57 +0.4 2,914,496 - OH686_13925 0.57 +0.7 2,914,845 + OH686_13930 0.13 -0.9 2,914,845 + OH686_13930 0.13 +0.5 2,914,845 + OH686_13930 0.13 +0.5 2,914,845 + OH686_13930 0.13 -0.8 2,914,845 + OH686_13930 0.13 -0.1 2,914,846 - OH686_13930 0.13 +0.0 2,914,846 - OH686_13930 0.13 -1.0 2,914,846 - OH686_13930 0.13 -0.5 2,914,846 - OH686_13930 0.13 +0.8 2,914,846 - OH686_13930 0.13 -0.2 2,914,998 + OH686_13930 0.37 -0.8 2,914,999 - OH686_13930 0.37 -0.6 2,914,999 - OH686_13930 0.37 +0.2 2,915,051 + OH686_13930 0.45 -0.8 2,915,051 + OH686_13930 0.45 +0.1 2,915,051 + OH686_13930 0.45 -0.2 2,915,051 + OH686_13930 0.45 -0.9 2,915,051 + OH686_13930 0.45 +0.2 2,915,051 + OH686_13930 0.45 +1.0 2,915,051 + OH686_13930 0.45 +0.2 2,915,051 + OH686_13930 0.45 -0.3 2,915,051 + OH686_13930 0.45 +0.8 2,915,051 + OH686_13930 0.45 +0.6 2,915,051 + OH686_13930 0.45 -2.3 2,915,051 + OH686_13930 0.45 -0.6 2,915,051 + OH686_13930 0.45 -0.3 2,915,052 - OH686_13930 0.45 +0.0 2,915,052 - OH686_13930 0.45 -0.1 2,915,052 - OH686_13930 0.45 +1.5 2,915,052 - OH686_13930 0.45 +0.1 2,915,052 - OH686_13930 0.45 +0.6 2,915,052 - OH686_13930 0.45 -0.8 2,915,066 + OH686_13930 0.47 -0.2 2,915,066 + OH686_13930 0.47 -0.4 2,915,066 + OH686_13930 0.47 +0.4 2,915,067 - OH686_13930 0.48 +0.2 2,915,067 - OH686_13930 0.48 -1.5 2,915,067 - OH686_13930 0.48 -0.2 2,915,067 - OH686_13930 0.48 -0.8 2,915,067 - OH686_13930 0.48 -0.3 2,915,270 + OH686_13930 0.79 -0.4 2,915,270 + OH686_13930 0.79 +0.5 2,915,271 - OH686_13930 0.79 -0.5 2,915,271 - OH686_13930 0.79 -0.4 2,915,271 - OH686_13930 0.79 +0.1 2,915,322 + OH686_13930 0.87 +0.1 2,915,322 + OH686_13930 0.87 +0.2 2,915,322 + OH686_13930 0.87 +0.2 2,915,322 + OH686_13930 0.87 +1.2 2,915,322 + OH686_13930 0.87 +0.7 2,915,322 + OH686_13930 0.87 -0.2 2,915,322 + OH686_13930 0.87 +0.4 2,915,323 - OH686_13930 0.88 -0.3 2,915,323 - OH686_13930 0.88 +0.2 2,915,433 + +0.2 2,915,433 + +1.0 2,915,434 - -0.4 2,915,434 - -1.5 2,915,480 + +0.4 2,915,480 + -2.9 2,915,480 + -1.8 2,915,480 + +0.8 2,915,481 - +0.8 2,915,481 - +0.4 2,915,481 - +0.4 2,915,481 - -0.3 2,915,481 - +0.0 2,915,481 - +0.1 2,915,483 + +0.5 2,915,484 - -0.8 2,915,532 + +0.3 2,915,532 + +0.8 2,915,532 + -0.1 2,915,532 + +0.6 2,915,532 + -1.5 2,915,532 + +0.2 2,915,532 + +0.5 2,915,532 + +0.5 2,915,532 + -0.9 2,915,533 - +0.4 2,915,533 - +2.1 2,915,533 - +0.2 2,915,533 - +0.2 2,915,533 - +0.2 2,915,533 - -0.1 2,915,533 - +0.4 2,915,533 - -0.6 2,915,533 - -0.2 2,915,533 - +0.8 2,915,533 - +0.2 2,915,533 - +0.3 2,915,533 - +0.2 2,915,533 - +0.3 2,915,533 - -0.2 2,915,745 + OH686_13935 0.19 -0.8 2,915,821 + OH686_13935 0.26 -0.4 2,915,821 + OH686_13935 0.26 +0.1 2,915,821 + OH686_13935 0.26 +0.5 2,915,821 + OH686_13935 0.26 +0.8 2,915,821 + OH686_13935 0.26 -0.8 2,915,821 + OH686_13935 0.26 -0.8 2,915,822 - OH686_13935 0.26 +0.2 2,915,822 - OH686_13935 0.26 -1.3 2,915,822 - OH686_13935 0.26 -0.9 2,915,822 - OH686_13935 0.26 -0.8 2,915,822 - OH686_13935 0.26 +0.1 2,915,885 + OH686_13935 0.31 -0.4 2,915,885 + OH686_13935 0.31 -0.4 2,915,885 + OH686_13935 0.31 -0.5 2,915,885 + OH686_13935 0.31 +0.4 2,915,885 + OH686_13935 0.31 -1.6 2,915,885 + OH686_13935 0.31 +0.4 2,915,885 + OH686_13935 0.31 -0.6 2,915,885 + OH686_13935 0.31 +0.8 2,915,885 + OH686_13935 0.31 -0.3 2,915,885 + OH686_13935 0.31 -0.7 2,915,885 + OH686_13935 0.31 -0.0 2,915,886 - OH686_13935 0.31 -0.1 2,915,886 - OH686_13935 0.31 -0.8 2,915,886 - OH686_13935 0.31 -1.5 2,915,886 - OH686_13935 0.31 +0.6 2,915,886 - OH686_13935 0.31 -0.8 2,915,886 - OH686_13935 0.31 +1.0 2,915,886 - OH686_13935 0.31 -0.1 2,915,886 - OH686_13935 0.31 +0.3 2,915,886 - OH686_13935 0.31 -0.2 2,915,886 - OH686_13935 0.31 +0.7 2,915,886 - OH686_13935 0.31 +0.1 2,915,886 - OH686_13935 0.31 -1.5 2,915,886 - OH686_13935 0.31 -1.0 2,915,886 - OH686_13935 0.31 +0.8 2,915,886 - OH686_13935 0.31 +0.1 2,915,886 - OH686_13935 0.31 +0.4 2,916,021 + OH686_13935 0.43 +0.3 2,916,021 + OH686_13935 0.43 -0.3 2,916,022 - OH686_13935 0.43 +0.7 2,916,022 - OH686_13935 0.43 +0.1 2,916,022 - OH686_13935 0.43 +0.4 2,916,022 - OH686_13935 0.43 +0.4 2,916,039 + OH686_13935 0.44 -0.1 2,916,192 + OH686_13935 0.57 +0.2 2,916,193 - OH686_13935 0.57 +0.1 2,916,300 + OH686_13935 0.66 -0.4 2,916,300 + OH686_13935 0.66 +0.3
Or see this region's nucleotide sequence