Strain Fitness in Pseudomonas sp. S08-1 around OH686_13520

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_13510 and OH686_13515 are separated by 93 nucleotidesOH686_13515 and OH686_13520 overlap by 4 nucleotidesOH686_13520 and OH686_13525 are separated by 3 nucleotides OH686_13510: OH686_13510 - Hydrogen peroxide-inducible genes activator, at 2,838,002 to 2,838,934 _13510 OH686_13515: OH686_13515 - hypothetical protein, at 2,839,028 to 2,839,741 _13515 OH686_13520: OH686_13520 - TonB system transport protein ExbD, at 2,839,738 to 2,840,163 _13520 OH686_13525: OH686_13525 - tonB-system energizer ExbB, at 2,840,167 to 2,841,213 _13525 Position (kb) 2839 2840 2841Strain fitness (log2 ratio) -2 -1 0 1 2at 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.908 kb on + strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.909 kb on - strandat 2838.912 kb on + strandat 2838.912 kb on + strandat 2838.912 kb on + strandat 2838.912 kb on + strandat 2838.912 kb on + strandat 2838.912 kb on + strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.913 kb on - strandat 2838.934 kb on + strandat 2838.934 kb on + strandat 2838.974 kb on + strandat 2838.975 kb on - strandat 2839.003 kb on - strandat 2839.829 kb on + strand, within OH686_13520

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,838,908 + -0.2
2,838,908 + +1.8
2,838,908 + +1.5
2,838,908 + +1.8
2,838,908 + +1.5
2,838,908 + -1.0
2,838,908 + +2.0
2,838,908 + +0.8
2,838,908 + +0.5
2,838,908 + +0.0
2,838,908 + -0.4
2,838,908 + -0.3
2,838,908 + +1.1
2,838,908 + -0.4
2,838,908 + -0.9
2,838,908 + +0.6
2,838,908 + +0.2
2,838,908 + +0.8
2,838,908 + +0.1
2,838,908 + -0.5
2,838,908 + +0.5
2,838,908 + -0.2
2,838,908 + -1.2
2,838,909 - +0.8
2,838,909 - +0.7
2,838,909 - -0.4
2,838,909 - +1.5
2,838,909 - -1.4
2,838,909 - -0.1
2,838,909 - +1.4
2,838,909 - -0.1
2,838,909 - +2.0
2,838,909 - +1.2
2,838,909 - -0.6
2,838,909 - -0.2
2,838,909 - +1.5
2,838,909 - -0.2
2,838,909 - +0.6
2,838,909 - -0.5
2,838,909 - +1.5
2,838,909 - +0.8
2,838,909 - +0.2
2,838,909 - +0.0
2,838,909 - +0.8
2,838,909 - +1.1
2,838,909 - -1.9
2,838,909 - +0.8
2,838,912 + +0.1
2,838,912 + +1.6
2,838,912 + -0.8
2,838,912 + +0.0
2,838,912 + -0.8
2,838,912 + +1.6
2,838,913 - -0.8
2,838,913 - +0.2
2,838,913 - +1.6
2,838,913 - -0.3
2,838,913 - -0.5
2,838,913 - -0.2
2,838,913 - +0.4
2,838,913 - -0.6
2,838,913 - +0.2
2,838,913 - -0.6
2,838,913 - +0.2
2,838,913 - +0.2
2,838,913 - +0.6
2,838,934 + +0.3
2,838,934 + +0.9
2,838,974 + +0.1
2,838,975 - -0.2
2,839,003 - -1.4
2,839,829 + OH686_13520 0.21 +0.8

Or see this region's nucleotide sequence