Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_12780 and OH686_12785 are separated by 6 nucleotides OH686_12785 and OH686_12790 are separated by 2 nucleotides
OH686_12780: OH686_12780 - T6SS component TssM (IcmF/VasK), at 2,686,285 to 2,689,806
_12780
OH686_12785: OH686_12785 - T6SS outer membrane component TssL (ImpK/VasF), at 2,689,813 to 2,690,679
_12785
OH686_12790: OH686_12790 - T6SS component TssK (ImpJ/VasE), at 2,690,682 to 2,692,013
_12790
Position (kb)
2689
2690
2691 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2689.013 kb on + strand, within OH686_12780 at 2689.013 kb on + strand, within OH686_12780 at 2689.013 kb on + strand, within OH686_12780 at 2689.013 kb on + strand, within OH686_12780 at 2689.014 kb on - strand, within OH686_12780 at 2689.106 kb on + strand, within OH686_12780 at 2689.106 kb on + strand, within OH686_12780 at 2689.106 kb on + strand, within OH686_12780 at 2689.107 kb on - strand, within OH686_12780 at 2689.107 kb on - strand, within OH686_12780 at 2689.107 kb on - strand, within OH686_12780 at 2689.107 kb on - strand, within OH686_12780 at 2689.107 kb on - strand, within OH686_12780 at 2689.107 kb on - strand, within OH686_12780 at 2689.274 kb on + strand, within OH686_12780 at 2689.274 kb on + strand, within OH686_12780 at 2689.274 kb on + strand, within OH686_12780 at 2689.274 kb on + strand, within OH686_12780 at 2689.275 kb on - strand, within OH686_12780 at 2689.275 kb on - strand, within OH686_12780 at 2689.275 kb on - strand, within OH686_12780 at 2689.406 kb on + strand, within OH686_12780 at 2689.406 kb on + strand, within OH686_12780 at 2689.406 kb on + strand, within OH686_12780 at 2689.406 kb on + strand, within OH686_12780 at 2689.406 kb on + strand, within OH686_12780 at 2689.406 kb on + strand, within OH686_12780 at 2689.407 kb on - strand, within OH686_12780 at 2689.862 kb on + strand at 2689.862 kb on + strand at 2689.862 kb on + strand at 2689.862 kb on + strand at 2689.862 kb on + strand at 2689.862 kb on + strand at 2689.863 kb on - strand at 2689.863 kb on - strand at 2689.863 kb on - strand at 2689.916 kb on + strand, within OH686_12785 at 2689.916 kb on + strand, within OH686_12785 at 2689.916 kb on + strand, within OH686_12785 at 2689.917 kb on - strand, within OH686_12785 at 2689.917 kb on - strand, within OH686_12785 at 2689.927 kb on + strand, within OH686_12785 at 2690.117 kb on + strand, within OH686_12785 at 2690.117 kb on + strand, within OH686_12785 at 2690.118 kb on - strand, within OH686_12785 at 2690.118 kb on - strand, within OH686_12785 at 2690.118 kb on - strand, within OH686_12785 at 2690.118 kb on - strand, within OH686_12785 at 2690.118 kb on - strand, within OH686_12785 at 2690.118 kb on - strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.150 kb on + strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.151 kb on - strand, within OH686_12785 at 2690.336 kb on + strand, within OH686_12785 at 2690.336 kb on + strand, within OH686_12785 at 2690.337 kb on - strand, within OH686_12785 at 2690.337 kb on - strand, within OH686_12785 at 2690.555 kb on + strand, within OH686_12785 at 2690.555 kb on + strand, within OH686_12785 at 2690.556 kb on - strand, within OH686_12785 at 2690.556 kb on - strand, within OH686_12785 at 2690.803 kb on + strand at 2690.803 kb on + strand at 2690.803 kb on + strand at 2690.803 kb on + strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2690.804 kb on - strand at 2691.265 kb on + strand, within OH686_12790 at 2691.265 kb on + strand, within OH686_12790 at 2691.265 kb on + strand, within OH686_12790 at 2691.265 kb on + strand, within OH686_12790 at 2691.266 kb on - strand, within OH686_12790 at 2691.266 kb on - strand, within OH686_12790 at 2691.266 kb on - strand, within OH686_12790 at 2691.266 kb on - strand, within OH686_12790 at 2691.266 kb on - strand, within OH686_12790 at 2691.266 kb on - strand, within OH686_12790 at 2691.286 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.308 kb on + strand, within OH686_12790 at 2691.309 kb on - strand, within OH686_12790 at 2691.309 kb on - strand, within OH686_12790 at 2691.309 kb on - strand, within OH686_12790 at 2691.309 kb on - strand, within OH686_12790 at 2691.309 kb on - strand, within OH686_12790 at 2691.309 kb on - strand, within OH686_12790 at 2691.424 kb on + strand, within OH686_12790 at 2691.424 kb on + strand, within OH686_12790 at 2691.424 kb on + strand, within OH686_12790 at 2691.424 kb on + strand, within OH686_12790 at 2691.424 kb on + strand, within OH686_12790 at 2691.425 kb on - strand, within OH686_12790 at 2691.425 kb on - strand, within OH686_12790 at 2691.425 kb on - strand, within OH686_12790 at 2691.425 kb on - strand, within OH686_12790
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,689,013 + OH686_12780 0.77 -0.1 2,689,013 + OH686_12780 0.77 -0.2 2,689,013 + OH686_12780 0.77 -0.1 2,689,013 + OH686_12780 0.77 -0.6 2,689,014 - OH686_12780 0.77 -0.1 2,689,106 + OH686_12780 0.80 +1.0 2,689,106 + OH686_12780 0.80 -1.6 2,689,106 + OH686_12780 0.80 +0.0 2,689,107 - OH686_12780 0.80 +1.1 2,689,107 - OH686_12780 0.80 +0.1 2,689,107 - OH686_12780 0.80 +0.1 2,689,107 - OH686_12780 0.80 -0.3 2,689,107 - OH686_12780 0.80 +1.3 2,689,107 - OH686_12780 0.80 +0.6 2,689,274 + OH686_12780 0.85 -0.3 2,689,274 + OH686_12780 0.85 +0.8 2,689,274 + OH686_12780 0.85 -0.1 2,689,274 + OH686_12780 0.85 +2.1 2,689,275 - OH686_12780 0.85 +0.7 2,689,275 - OH686_12780 0.85 +0.0 2,689,275 - OH686_12780 0.85 +0.1 2,689,406 + OH686_12780 0.89 +0.0 2,689,406 + OH686_12780 0.89 -0.6 2,689,406 + OH686_12780 0.89 -0.0 2,689,406 + OH686_12780 0.89 -1.3 2,689,406 + OH686_12780 0.89 -0.5 2,689,406 + OH686_12780 0.89 +0.1 2,689,407 - OH686_12780 0.89 -0.6 2,689,862 + -1.1 2,689,862 + -0.4 2,689,862 + +0.8 2,689,862 + +0.2 2,689,862 + +0.3 2,689,862 + +0.1 2,689,863 - -0.5 2,689,863 - -0.7 2,689,863 - -0.4 2,689,916 + OH686_12785 0.12 -0.6 2,689,916 + OH686_12785 0.12 +0.3 2,689,916 + OH686_12785 0.12 -0.2 2,689,917 - OH686_12785 0.12 +0.6 2,689,917 - OH686_12785 0.12 +0.2 2,689,927 + OH686_12785 0.13 +0.7 2,690,117 + OH686_12785 0.35 +0.2 2,690,117 + OH686_12785 0.35 -0.0 2,690,118 - OH686_12785 0.35 +0.6 2,690,118 - OH686_12785 0.35 -0.1 2,690,118 - OH686_12785 0.35 -2.1 2,690,118 - OH686_12785 0.35 +0.4 2,690,118 - OH686_12785 0.35 +0.6 2,690,118 - OH686_12785 0.35 +1.0 2,690,150 + OH686_12785 0.39 -0.8 2,690,150 + OH686_12785 0.39 +0.1 2,690,150 + OH686_12785 0.39 +0.7 2,690,150 + OH686_12785 0.39 -0.3 2,690,150 + OH686_12785 0.39 -0.5 2,690,150 + OH686_12785 0.39 +0.5 2,690,150 + OH686_12785 0.39 -0.8 2,690,150 + OH686_12785 0.39 -1.2 2,690,150 + OH686_12785 0.39 -0.5 2,690,150 + OH686_12785 0.39 +0.1 2,690,150 + OH686_12785 0.39 -1.2 2,690,150 + OH686_12785 0.39 +0.2 2,690,150 + OH686_12785 0.39 -0.3 2,690,150 + OH686_12785 0.39 -1.1 2,690,150 + OH686_12785 0.39 +0.1 2,690,150 + OH686_12785 0.39 +0.3 2,690,150 + OH686_12785 0.39 +1.2 2,690,150 + OH686_12785 0.39 +0.3 2,690,150 + OH686_12785 0.39 +0.1 2,690,150 + OH686_12785 0.39 +0.3 2,690,150 + OH686_12785 0.39 -0.0 2,690,150 + OH686_12785 0.39 -0.1 2,690,150 + OH686_12785 0.39 +0.0 2,690,150 + OH686_12785 0.39 -0.2 2,690,151 - OH686_12785 0.39 -0.3 2,690,151 - OH686_12785 0.39 +0.6 2,690,151 - OH686_12785 0.39 -0.0 2,690,151 - OH686_12785 0.39 -0.6 2,690,151 - OH686_12785 0.39 +0.7 2,690,151 - OH686_12785 0.39 +1.2 2,690,151 - OH686_12785 0.39 +0.6 2,690,151 - OH686_12785 0.39 +0.0 2,690,151 - OH686_12785 0.39 -2.1 2,690,151 - OH686_12785 0.39 -1.8 2,690,151 - OH686_12785 0.39 +0.5 2,690,151 - OH686_12785 0.39 +0.2 2,690,151 - OH686_12785 0.39 -0.3 2,690,151 - OH686_12785 0.39 -0.6 2,690,151 - OH686_12785 0.39 -0.3 2,690,151 - OH686_12785 0.39 +0.2 2,690,151 - OH686_12785 0.39 -0.1 2,690,151 - OH686_12785 0.39 -0.4 2,690,151 - OH686_12785 0.39 -0.5 2,690,336 + OH686_12785 0.60 +0.1 2,690,336 + OH686_12785 0.60 +0.3 2,690,337 - OH686_12785 0.60 -0.7 2,690,337 - OH686_12785 0.60 +0.8 2,690,555 + OH686_12785 0.86 +0.7 2,690,555 + OH686_12785 0.86 -0.2 2,690,556 - OH686_12785 0.86 -0.3 2,690,556 - OH686_12785 0.86 -0.5 2,690,803 + -0.4 2,690,803 + +0.7 2,690,803 + -0.2 2,690,803 + -0.4 2,690,804 - -1.8 2,690,804 - -0.3 2,690,804 - -0.2 2,690,804 - +0.2 2,690,804 - -0.3 2,690,804 - +0.0 2,690,804 - +0.5 2,690,804 - -1.2 2,690,804 - +1.1 2,690,804 - +0.5 2,691,265 + OH686_12790 0.44 -0.5 2,691,265 + OH686_12790 0.44 -2.2 2,691,265 + OH686_12790 0.44 +0.1 2,691,265 + OH686_12790 0.44 -0.7 2,691,266 - OH686_12790 0.44 -0.7 2,691,266 - OH686_12790 0.44 -0.1 2,691,266 - OH686_12790 0.44 +0.8 2,691,266 - OH686_12790 0.44 -0.3 2,691,266 - OH686_12790 0.44 -0.0 2,691,266 - OH686_12790 0.44 +0.2 2,691,286 + OH686_12790 0.45 +0.4 2,691,308 + OH686_12790 0.47 -0.2 2,691,308 + OH686_12790 0.47 -0.5 2,691,308 + OH686_12790 0.47 -0.3 2,691,308 + OH686_12790 0.47 +0.1 2,691,308 + OH686_12790 0.47 -0.7 2,691,308 + OH686_12790 0.47 -0.6 2,691,308 + OH686_12790 0.47 -0.1 2,691,308 + OH686_12790 0.47 +0.3 2,691,308 + OH686_12790 0.47 +0.2 2,691,308 + OH686_12790 0.47 -0.4 2,691,308 + OH686_12790 0.47 -0.1 2,691,309 - OH686_12790 0.47 -0.2 2,691,309 - OH686_12790 0.47 -0.5 2,691,309 - OH686_12790 0.47 +0.6 2,691,309 - OH686_12790 0.47 +0.8 2,691,309 - OH686_12790 0.47 -0.0 2,691,309 - OH686_12790 0.47 -0.5 2,691,424 + OH686_12790 0.56 +0.3 2,691,424 + OH686_12790 0.56 -0.6 2,691,424 + OH686_12790 0.56 -0.3 2,691,424 + OH686_12790 0.56 +0.5 2,691,424 + OH686_12790 0.56 -0.1 2,691,425 - OH686_12790 0.56 -0.0 2,691,425 - OH686_12790 0.56 -0.0 2,691,425 - OH686_12790 0.56 -1.3 2,691,425 - OH686_12790 0.56 -0.0
Or see this region's nucleotide sequence