Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS13415

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,613,862	-		ABIE40_RS13410	0.73	-2.8
2,613,862	-		ABIE40_RS13410	0.73	-2.4
2,613,862	-		ABIE40_RS13410	0.73	-2.0
2,613,894	+		ABIE40_RS13410	0.74	-1.9
2,613,894	+		ABIE40_RS13410	0.74	-1.9
2,614,015	-		ABIE40_RS13410	0.80	-1.6
2,614,015	-		ABIE40_RS13410	0.80	-4.0
2,614,210	-		ABIE40_RS13410	0.88	-1.6
2,614,288	-				-2.0
2,614,456	-				-2.0
2,614,462	+				-3.0
2,614,462	+				+1.4
2,614,463	-				-2.5
2,614,463	-				-1.9
2,614,502	+				+0.4
2,614,503	-				-1.4
2,614,503	-				-0.9
2,614,607	+				-1.9
2,614,607	+				-2.3
2,614,607	+				-2.9
2,614,608	-				-1.1
2,614,608	-				-1.8
2,614,608	-				+0.8
2,614,608	-				-1.0
2,614,608	-				-1.2
2,614,633	-				-2.6
2,614,712	+				-1.5
2,614,713	-				-0.7
2,614,715	+				-0.1
2,614,715	+				+0.0
2,614,715	+				-0.4
2,614,715	+				+0.8
2,614,741	+				-0.6
2,614,742	-				+0.4
2,614,742	-				+0.8
2,614,742	-				-1.0
2,614,780	-				+0.5
2,614,791	-				+1.6
2,614,793	+				+0.4
2,614,794	-				+0.2
2,614,911	+				+0.4
2,614,911	+				-2.2
2,614,911	+				+0.3
2,614,911	+				+0.4
2,614,912	-				+1.1
2,614,912	-				-0.2
2,614,912	-				-0.4
2,614,912	-				-1.4
2,614,912	-				-0.9
2,614,912	-				-0.4
2,614,912	-				+0.0
2,615,075	+		ABIE40_RS13415	0.17	+1.0
2,615,076	-		ABIE40_RS13415	0.17	+1.4
2,615,076	-		ABIE40_RS13415	0.17	-0.4
2,615,117	+		ABIE40_RS13415	0.19	+0.2
2,615,138	+		ABIE40_RS13415	0.20	-0.5
2,615,138	+		ABIE40_RS13415	0.20	-1.2
2,615,139	-		ABIE40_RS13415	0.20	-0.4
2,615,139	-		ABIE40_RS13415	0.20	-0.3
2,615,150	+		ABIE40_RS13415	0.20	+1.0
2,615,151	-		ABIE40_RS13415	0.21	-0.4
2,615,174	+		ABIE40_RS13415	0.22	-0.5
2,615,174	+		ABIE40_RS13415	0.22	-1.0
2,615,174	+		ABIE40_RS13415	0.22	-0.0
2,615,175	-		ABIE40_RS13415	0.22	+1.4
2,615,175	-		ABIE40_RS13415	0.22	+0.4
2,615,175	-		ABIE40_RS13415	0.22	+0.4
2,615,175	-		ABIE40_RS13415	0.22	-0.5
2,615,198	+		ABIE40_RS13415	0.23	+0.9
2,615,198	+		ABIE40_RS13415	0.23	+1.4
2,615,198	+		ABIE40_RS13415	0.23	-0.4
2,615,198	+		ABIE40_RS13415	0.23	-0.7
2,615,199	-		ABIE40_RS13415	0.23	+0.6
2,615,199	-		ABIE40_RS13415	0.23	+0.2
2,615,199	-		ABIE40_RS13415	0.23	-0.9
2,615,199	-		ABIE40_RS13415	0.23	+0.7
2,615,199	-		ABIE40_RS13415	0.23	+0.7
2,615,199	-		ABIE40_RS13415	0.23	+1.4
2,615,199	-		ABIE40_RS13415	0.23	-0.1
2,615,201	+		ABIE40_RS13415	0.23	-0.0
2,615,201	+		ABIE40_RS13415	0.23	-1.1
2,615,201	+		ABIE40_RS13415	0.23	+0.9
2,615,201	+		ABIE40_RS13415	0.23	-0.3
2,615,202	-		ABIE40_RS13415	0.23	-0.1
2,615,202	-		ABIE40_RS13415	0.23	+1.4
2,615,202	-		ABIE40_RS13415	0.23	+0.4
2,615,202	-		ABIE40_RS13415	0.23	+0.2
2,615,202	-		ABIE40_RS13415	0.23	+1.1
2,615,202	-		ABIE40_RS13415	0.23	-0.7
2,615,204	+		ABIE40_RS13415	0.23	+1.6
2,615,204	+		ABIE40_RS13415	0.23	+0.2
2,615,205	-		ABIE40_RS13415	0.23	-0.1
2,615,251	+		ABIE40_RS13415	0.25	-0.1
2,615,253	+		ABIE40_RS13415	0.25	+0.2
2,615,255	+		ABIE40_RS13415	0.25	-0.2
2,615,255	+		ABIE40_RS13415	0.25	-0.0
2,615,255	+		ABIE40_RS13415	0.25	-3.0
2,615,255	+		ABIE40_RS13415	0.25	+0.7
2,615,255	+		ABIE40_RS13415	0.25	-1.4
2,615,256	-		ABIE40_RS13415	0.25	-0.4
2,615,256	-		ABIE40_RS13415	0.25	+0.6
2,615,256	-		ABIE40_RS13415	0.25	-1.8
2,615,256	-		ABIE40_RS13415	0.25	-1.2
2,615,280	+		ABIE40_RS13415	0.27	+1.2
2,615,280	+		ABIE40_RS13415	0.27	-0.5
2,615,281	-		ABIE40_RS13415	0.27	-0.1
2,615,281	-		ABIE40_RS13415	0.27	-0.7
2,615,333	+		ABIE40_RS13415	0.29	-1.7
2,615,333	+		ABIE40_RS13415	0.29	-1.0
2,615,333	+		ABIE40_RS13415	0.29	-0.0
2,615,334	-		ABIE40_RS13415	0.29	-0.1
2,615,334	-		ABIE40_RS13415	0.29	+1.4
2,615,385	+		ABIE40_RS13415	0.32	-0.2
2,615,385	+		ABIE40_RS13415	0.32	+1.4
2,615,386	-		ABIE40_RS13415	0.32	-1.8
2,615,387	+		ABIE40_RS13415	0.32	-1.4
2,615,387	+		ABIE40_RS13415	0.32	-0.8
2,615,387	+		ABIE40_RS13415	0.32	+1.2
2,615,387	+		ABIE40_RS13415	0.32	+1.2
2,615,387	+		ABIE40_RS13415	0.32	-1.2
2,615,462	+		ABIE40_RS13415	0.35	+0.4
2,615,462	+		ABIE40_RS13415	0.35	+2.4
2,615,578	-		ABIE40_RS13415	0.41	-0.5
2,615,597	+		ABIE40_RS13415	0.41	+0.2
2,615,597	+		ABIE40_RS13415	0.41	-0.6
2,615,597	+		ABIE40_RS13415	0.41	-0.4
2,615,597	+		ABIE40_RS13415	0.41	-0.8
2,615,597	+		ABIE40_RS13415	0.41	+0.9
2,615,597	+		ABIE40_RS13415	0.41	+0.2
2,615,597	+		ABIE40_RS13415	0.41	+0.4
2,615,598	-		ABIE40_RS13415	0.42	-0.0
2,615,598	-		ABIE40_RS13415	0.42	-0.9
2,615,601	+		ABIE40_RS13415	0.42	-1.9
2,615,601	+		ABIE40_RS13415	0.42	-0.6
2,615,601	+		ABIE40_RS13415	0.42	-0.7
2,615,602	-		ABIE40_RS13415	0.42	-0.8
2,615,602	-		ABIE40_RS13415	0.42	-0.9
2,615,602	-		ABIE40_RS13415	0.42	+0.1
2,615,602	-		ABIE40_RS13415	0.42	+0.5
2,615,676	+		ABIE40_RS13415	0.45	+2.4
2,615,676	+		ABIE40_RS13415	0.45	+0.5
2,615,677	-		ABIE40_RS13415	0.45	-0.1
2,615,677	-		ABIE40_RS13415	0.45	+0.4
2,615,677	-		ABIE40_RS13415	0.45	+0.1
2,615,677	-		ABIE40_RS13415	0.45	+0.2
2,615,677	-		ABIE40_RS13415	0.45	-1.3
2,615,719	-		ABIE40_RS13415	0.47	+1.4
2,615,719	-		ABIE40_RS13415	0.47	+1.0
2,615,732	+		ABIE40_RS13415	0.48	-0.3
2,615,732	+		ABIE40_RS13415	0.48	+0.6
2,615,732	+		ABIE40_RS13415	0.48	-0.9
2,615,732	+		ABIE40_RS13415	0.48	-1.3
2,615,732	+		ABIE40_RS13415	0.48	+0.3
2,615,733	-		ABIE40_RS13415	0.48	+0.7
2,615,733	-		ABIE40_RS13415	0.48	-1.0
2,615,733	-		ABIE40_RS13415	0.48	+0.8
2,615,733	-		ABIE40_RS13415	0.48	-0.5
2,615,733	-		ABIE40_RS13415	0.48	+0.1
2,615,741	+		ABIE40_RS13415	0.48	-0.4
2,615,741	+		ABIE40_RS13415	0.48	-0.5
2,615,741	+		ABIE40_RS13415	0.48	+0.2
2,615,742	-		ABIE40_RS13415	0.48	-0.0
2,615,755	-		ABIE40_RS13415	0.49	-0.4
2,615,775	+		ABIE40_RS13415	0.50	+1.4
2,615,776	-		ABIE40_RS13415	0.50	-1.4
2,615,776	-		ABIE40_RS13415	0.50	+0.0
2,615,776	-		ABIE40_RS13415	0.50	-0.3
2,615,776	-		ABIE40_RS13415	0.50	+0.0
2,615,776	-		ABIE40_RS13415	0.50	-0.3
2,615,804	+		ABIE40_RS13415	0.51	-0.7
2,615,810	+		ABIE40_RS13415	0.51	-0.7
2,615,821	+		ABIE40_RS13415	0.52	-1.1
2,615,827	-		ABIE40_RS13415	0.52	-0.3
2,615,872	-		ABIE40_RS13415	0.54	-1.1
2,615,880	-		ABIE40_RS13415	0.55	+0.3
2,615,933	+		ABIE40_RS13415	0.57	+0.2
2,615,933	+		ABIE40_RS13415	0.57	-0.1
2,615,934	-		ABIE40_RS13415	0.57	-0.5
2,615,937	+		ABIE40_RS13415	0.57	+0.7
2,615,937	+		ABIE40_RS13415	0.57	-1.5
2,615,938	-		ABIE40_RS13415	0.57	-0.4
2,615,949	+		ABIE40_RS13415	0.58	-0.9
2,616,008	+		ABIE40_RS13415	0.61	-0.7
2,616,009	-		ABIE40_RS13415	0.61	-0.4
2,616,009	-		ABIE40_RS13415	0.61	+1.2
2,616,044	+		ABIE40_RS13415	0.62	+0.4
2,616,045	-		ABIE40_RS13415	0.62	-0.3
2,616,257	+		ABIE40_RS13415	0.72	+0.1
2,616,258	-		ABIE40_RS13415	0.72	-0.5
2,616,360	-		ABIE40_RS13415	0.77	+1.4
2,616,402	+		ABIE40_RS13415	0.79	-0.8
2,616,402	+		ABIE40_RS13415	0.79	+1.4
2,616,402	+		ABIE40_RS13415	0.79	+0.3
2,616,402	+		ABIE40_RS13415	0.79	-1.2
2,616,403	-		ABIE40_RS13415	0.79	-0.7
2,616,403	-		ABIE40_RS13415	0.79	-0.3
2,616,403	-		ABIE40_RS13415	0.79	-0.8
2,616,403	-		ABIE40_RS13415	0.79	+0.4
2,616,403	-		ABIE40_RS13415	0.79	+0.3
2,616,404	+		ABIE40_RS13415	0.79	+0.4
2,616,404	+		ABIE40_RS13415	0.79	-0.4
2,616,404	+		ABIE40_RS13415	0.79	-0.3
2,616,404	+		ABIE40_RS13415	0.79	+0.4
2,616,404	+		ABIE40_RS13415	0.79	+2.4
2,616,404	+		ABIE40_RS13415	0.79	-0.2
2,616,404	+		ABIE40_RS13415	0.79	+0.6
2,616,404	+		ABIE40_RS13415	0.79	+1.6
2,616,404	+		ABIE40_RS13415	0.79	+0.6
2,616,405	-		ABIE40_RS13415	0.79	+0.3
2,616,405	-		ABIE40_RS13415	0.79	+1.3
2,616,405	-		ABIE40_RS13415	0.79	-0.4
2,616,405	-		ABIE40_RS13415	0.79	+1.4
2,616,440	+		ABIE40_RS13415	0.81	+0.5
2,616,449	+		ABIE40_RS13415	0.81	-0.9
2,616,450	-		ABIE40_RS13415	0.82	+0.3
2,616,450	-		ABIE40_RS13415	0.82	+1.6
2,616,450	-		ABIE40_RS13415	0.82	+0.4
2,616,450	-		ABIE40_RS13415	0.82	-2.2
2,616,568	-		ABIE40_RS13415	0.87	+2.2
2,616,627	+		ABIE40_RS13415	0.90	+0.2
2,616,648	+				+0.1
2,616,843	+				-0.1
2,616,843	+				-0.8
2,616,843	+				-0.5
2,616,843	+				+0.2
2,616,843	+				-0.1
2,616,844	-				+0.6
2,616,844	-				-1.2
2,616,844	-				-0.8
2,616,857	+				-1.9
2,616,857	+				+0.3
2,616,857	+				-0.3
2,616,858	-				+0.4
2,616,858	-				-0.3
2,616,870	+				+1.4
2,616,982	+				+0.5
2,616,994	+				-0.2
2,617,168	+				+1.2
2,617,169	-				+1.4
2,617,169	-				+1.4
2,617,742	+		ABIE40_RS13420	0.67	-0.5
2,617,742	+		ABIE40_RS13420	0.67	-1.6
2,617,742	+		ABIE40_RS13420	0.67	-0.7
2,617,742	+		ABIE40_RS13420	0.67	-1.4
2,617,743	-		ABIE40_RS13420	0.68	+0.3
2,617,743	-		ABIE40_RS13420	0.68	-0.2
2,617,743	-		ABIE40_RS13420	0.68	-0.4
2,617,744	+		ABIE40_RS13420	0.68	-0.8
2,617,744	+		ABIE40_RS13420	0.68	+1.2
2,617,810	-		ABIE40_RS13420	0.75	-0.4
2,617,810	-		ABIE40_RS13420	0.75	-0.6
2,617,810	-		ABIE40_RS13420	0.75	-0.1