Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24735 and ABID97_RS24740 are separated by 181 nucleotides ABID97_RS24740 and ABID97_RS24745 are separated by 13 nucleotides ABID97_RS24745 and ABID97_RS24750 are separated by 10 nucleotides
ABID97_RS24735: ABID97_RS24735 - tRNA dihydrouridine synthase DusB, at 5,127,322 to 5,128,380
_RS24735
ABID97_RS24740: ABID97_RS24740 - YqaA family protein, at 5,128,562 to 5,129,032
_RS24740
ABID97_RS24745: ABID97_RS24745 - glutathione S-transferase, at 5,129,046 to 5,129,720
_RS24745
ABID97_RS24750: ABID97_RS24750 - redox-regulated ATPase YchF, at 5,129,731 to 5,130,822
_RS24750
Position (kb) 5129
5130 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5128.121 kb on + strand, within ABID97_RS24735 at 5128.121 kb on + strand, within ABID97_RS24735 at 5128.121 kb on + strand, within ABID97_RS24735 at 5128.122 kb on - strand, within ABID97_RS24735 at 5128.122 kb on - strand, within ABID97_RS24735 at 5128.122 kb on - strand, within ABID97_RS24735 at 5128.431 kb on - strand at 5128.431 kb on - strand at 5128.431 kb on - strand at 5128.431 kb on - strand at 5128.536 kb on + strand at 5128.536 kb on + strand at 5128.537 kb on - strand at 5128.537 kb on - strand at 5128.537 kb on - strand at 5128.538 kb on + strand at 5128.538 kb on + strand at 5128.539 kb on - strand at 5128.539 kb on - strand at 5128.562 kb on - strand at 5128.562 kb on - strand at 5128.610 kb on + strand, within ABID97_RS24740 at 5128.611 kb on - strand, within ABID97_RS24740 at 5128.612 kb on - strand, within ABID97_RS24740 at 5128.779 kb on + strand, within ABID97_RS24740 at 5128.780 kb on - strand, within ABID97_RS24740 at 5128.840 kb on - strand, within ABID97_RS24740 at 5128.962 kb on - strand, within ABID97_RS24740 at 5128.962 kb on - strand, within ABID97_RS24740 at 5128.962 kb on - strand, within ABID97_RS24740 at 5128.988 kb on + strand at 5128.988 kb on + strand at 5128.988 kb on + strand at 5128.989 kb on - strand at 5129.015 kb on + strand at 5129.016 kb on - strand at 5129.092 kb on + strand at 5129.092 kb on + strand at 5129.093 kb on - strand at 5129.093 kb on - strand at 5129.630 kb on - strand, within ABID97_RS24745 at 5129.777 kb on + strand at 5129.777 kb on + strand at 5129.777 kb on + strand at 5129.778 kb on - strand at 5129.778 kb on - strand at 5129.778 kb on - strand at 5129.835 kb on - strand at 5129.843 kb on + strand, within ABID97_RS24750 at 5129.843 kb on + strand, within ABID97_RS24750 at 5129.843 kb on + strand, within ABID97_RS24750 at 5129.844 kb on - strand, within ABID97_RS24750 at 5129.844 kb on - strand, within ABID97_RS24750 at 5129.844 kb on - strand, within ABID97_RS24750 at 5129.877 kb on - strand, within ABID97_RS24750 at 5129.877 kb on - strand, within ABID97_RS24750 at 5129.978 kb on + strand, within ABID97_RS24750 at 5129.978 kb on + strand, within ABID97_RS24750 at 5129.978 kb on + strand, within ABID97_RS24750 at 5129.978 kb on + strand, within ABID97_RS24750 at 5129.978 kb on + strand, within ABID97_RS24750 at 5129.979 kb on - strand, within ABID97_RS24750 at 5130.002 kb on + strand, within ABID97_RS24750 at 5130.002 kb on + strand, within ABID97_RS24750 at 5130.002 kb on + strand, within ABID97_RS24750 at 5130.002 kb on + strand, within ABID97_RS24750 at 5130.149 kb on + strand, within ABID97_RS24750 at 5130.149 kb on + strand, within ABID97_RS24750 at 5130.149 kb on + strand, within ABID97_RS24750 at 5130.150 kb on - strand, within ABID97_RS24750 at 5130.150 kb on - strand, within ABID97_RS24750
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,128,121 + ABID97_RS24735 0.75 +0.1 5,128,121 + ABID97_RS24735 0.75 -0.8 5,128,121 + ABID97_RS24735 0.75 -2.8 5,128,122 - ABID97_RS24735 0.76 -1.1 5,128,122 - ABID97_RS24735 0.76 -0.5 5,128,122 - ABID97_RS24735 0.76 +0.9 5,128,431 - -1.1 5,128,431 - -1.6 5,128,431 - -0.8 5,128,431 - -1.6 5,128,536 + -0.6 5,128,536 + -0.3 5,128,537 - -1.2 5,128,537 - -0.3 5,128,537 - -0.4 5,128,538 + -0.4 5,128,538 + -0.3 5,128,539 - -0.5 5,128,539 - -0.7 5,128,562 - -0.5 5,128,562 - -1.2 5,128,610 + ABID97_RS24740 0.10 -0.1 5,128,611 - ABID97_RS24740 0.10 -0.4 5,128,612 - ABID97_RS24740 0.11 -0.9 5,128,779 + ABID97_RS24740 0.46 -0.4 5,128,780 - ABID97_RS24740 0.46 +0.9 5,128,840 - ABID97_RS24740 0.59 -0.6 5,128,962 - ABID97_RS24740 0.85 -0.3 5,128,962 - ABID97_RS24740 0.85 +0.1 5,128,962 - ABID97_RS24740 0.85 -0.1 5,128,988 + -0.6 5,128,988 + +0.2 5,128,988 + -0.1 5,128,989 - -0.9 5,129,015 + -0.2 5,129,016 - -0.1 5,129,092 + +0.7 5,129,092 + +0.4 5,129,093 - -0.0 5,129,093 - -0.1 5,129,630 - ABID97_RS24745 0.87 +0.8 5,129,777 + -0.1 5,129,777 + +1.2 5,129,777 + +0.7 5,129,778 - -0.5 5,129,778 - -0.8 5,129,778 - -1.8 5,129,835 - -0.5 5,129,843 + ABID97_RS24750 0.10 +0.1 5,129,843 + ABID97_RS24750 0.10 +0.4 5,129,843 + ABID97_RS24750 0.10 -0.5 5,129,844 - ABID97_RS24750 0.10 -0.3 5,129,844 - ABID97_RS24750 0.10 +0.4 5,129,844 - ABID97_RS24750 0.10 -1.0 5,129,877 - ABID97_RS24750 0.13 -0.8 5,129,877 - ABID97_RS24750 0.13 -1.4 5,129,978 + ABID97_RS24750 0.23 -1.1 5,129,978 + ABID97_RS24750 0.23 +1.5 5,129,978 + ABID97_RS24750 0.23 -0.5 5,129,978 + ABID97_RS24750 0.23 -0.4 5,129,978 + ABID97_RS24750 0.23 +1.3 5,129,979 - ABID97_RS24750 0.23 -0.8 5,130,002 + ABID97_RS24750 0.25 -0.8 5,130,002 + ABID97_RS24750 0.25 -1.2 5,130,002 + ABID97_RS24750 0.25 -0.5 5,130,002 + ABID97_RS24750 0.25 -0.6 5,130,149 + ABID97_RS24750 0.38 -1.0 5,130,149 + ABID97_RS24750 0.38 +0.9 5,130,149 + ABID97_RS24750 0.38 +0.1 5,130,150 - ABID97_RS24750 0.38 +0.9 5,130,150 - ABID97_RS24750 0.38 +0.9
Or see this region's nucleotide sequence