Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23800 and ABID97_RS23805 overlap by 4 nucleotides ABID97_RS23805 and ABID97_RS23810 are separated by 69 nucleotides
ABID97_RS23800: ABID97_RS23800 - ABC transporter substrate-binding protein, at 4,926,381 to 4,927,868
_RS23800
ABID97_RS23805: ABID97_RS23805 - amidase, at 4,927,865 to 4,929,280
_RS23805
ABID97_RS23810: ABID97_RS23810 - LysR substrate-binding domain-containing protein, at 4,929,350 to 4,930,219
_RS23810
Position (kb) 4927
4928
4929
4930 Strain fitness (log2 ratio) -1
0
1
2 at 4926.937 kb on - strand, within ABID97_RS23800 at 4926.937 kb on - strand, within ABID97_RS23800 at 4927.314 kb on + strand, within ABID97_RS23800 at 4927.314 kb on + strand, within ABID97_RS23800 at 4927.315 kb on - strand, within ABID97_RS23800 at 4927.315 kb on - strand, within ABID97_RS23800 at 4927.335 kb on + strand, within ABID97_RS23800 at 4927.335 kb on + strand, within ABID97_RS23800 at 4927.335 kb on + strand, within ABID97_RS23800 at 4927.449 kb on + strand, within ABID97_RS23800 at 4927.449 kb on + strand, within ABID97_RS23800 at 4927.450 kb on - strand, within ABID97_RS23800 at 4927.551 kb on + strand, within ABID97_RS23800 at 4927.551 kb on + strand, within ABID97_RS23800 at 4927.566 kb on + strand, within ABID97_RS23800 at 4927.567 kb on - strand, within ABID97_RS23800 at 4927.614 kb on + strand, within ABID97_RS23800 at 4927.629 kb on + strand, within ABID97_RS23800 at 4927.629 kb on + strand, within ABID97_RS23800 at 4927.629 kb on + strand, within ABID97_RS23800 at 4927.630 kb on - strand, within ABID97_RS23800 at 4927.632 kb on + strand, within ABID97_RS23800 at 4927.632 kb on + strand, within ABID97_RS23800 at 4927.632 kb on + strand, within ABID97_RS23800 at 4927.632 kb on + strand, within ABID97_RS23800 at 4927.642 kb on - strand, within ABID97_RS23800 at 4927.768 kb on - strand at 4927.768 kb on - strand at 4927.928 kb on + strand at 4928.265 kb on - strand, within ABID97_RS23805 at 4928.496 kb on - strand, within ABID97_RS23805 at 4928.496 kb on - strand, within ABID97_RS23805 at 4928.886 kb on - strand, within ABID97_RS23805 at 4929.003 kb on - strand, within ABID97_RS23805 at 4929.278 kb on + strand at 4929.278 kb on + strand at 4929.278 kb on + strand at 4929.278 kb on + strand at 4929.279 kb on - strand at 4929.351 kb on + strand at 4929.351 kb on + strand at 4929.351 kb on + strand at 4929.582 kb on + strand, within ABID97_RS23810 at 4929.772 kb on + strand, within ABID97_RS23810 at 4929.810 kb on + strand, within ABID97_RS23810 at 4929.811 kb on - strand, within ABID97_RS23810 at 4929.919 kb on - strand, within ABID97_RS23810 at 4930.011 kb on + strand, within ABID97_RS23810
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,926,937 - ABID97_RS23800 0.37 +0.5 4,926,937 - ABID97_RS23800 0.37 -1.0 4,927,314 + ABID97_RS23800 0.63 -0.3 4,927,314 + ABID97_RS23800 0.63 +0.4 4,927,315 - ABID97_RS23800 0.63 -0.7 4,927,315 - ABID97_RS23800 0.63 +1.4 4,927,335 + ABID97_RS23800 0.64 +0.9 4,927,335 + ABID97_RS23800 0.64 -0.9 4,927,335 + ABID97_RS23800 0.64 -0.4 4,927,449 + ABID97_RS23800 0.72 +1.3 4,927,449 + ABID97_RS23800 0.72 -0.6 4,927,450 - ABID97_RS23800 0.72 -0.7 4,927,551 + ABID97_RS23800 0.79 +1.2 4,927,551 + ABID97_RS23800 0.79 -0.9 4,927,566 + ABID97_RS23800 0.80 -0.6 4,927,567 - ABID97_RS23800 0.80 -0.8 4,927,614 + ABID97_RS23800 0.83 -1.5 4,927,629 + ABID97_RS23800 0.84 -1.0 4,927,629 + ABID97_RS23800 0.84 -0.8 4,927,629 + ABID97_RS23800 0.84 -0.7 4,927,630 - ABID97_RS23800 0.84 -0.7 4,927,632 + ABID97_RS23800 0.84 -0.4 4,927,632 + ABID97_RS23800 0.84 -0.8 4,927,632 + ABID97_RS23800 0.84 -0.5 4,927,632 + ABID97_RS23800 0.84 +0.4 4,927,642 - ABID97_RS23800 0.85 -0.7 4,927,768 - +0.1 4,927,768 - -0.7 4,927,928 + +0.2 4,928,265 - ABID97_RS23805 0.28 +0.2 4,928,496 - ABID97_RS23805 0.45 +0.4 4,928,496 - ABID97_RS23805 0.45 +0.8 4,928,886 - ABID97_RS23805 0.72 +1.9 4,929,003 - ABID97_RS23805 0.80 +0.1 4,929,278 + +0.1 4,929,278 + +0.1 4,929,278 + -0.5 4,929,278 + +0.1 4,929,279 - +0.1 4,929,351 + +0.1 4,929,351 + +0.1 4,929,351 + -0.4 4,929,582 + ABID97_RS23810 0.27 +0.2 4,929,772 + ABID97_RS23810 0.49 +0.2 4,929,810 + ABID97_RS23810 0.53 +0.2 4,929,811 - ABID97_RS23810 0.53 -0.0 4,929,919 - ABID97_RS23810 0.65 -0.3 4,930,011 + ABID97_RS23810 0.76 +0.7
Or see this region's nucleotide sequence