Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20700 and ABID97_RS20705 are separated by 121 nucleotides ABID97_RS20705 and ABID97_RS20710 are separated by 18 nucleotides ABID97_RS20710 and ABID97_RS20715 are separated by 61 nucleotides
ABID97_RS20700: ABID97_RS20700 - ribosome biogenesis factor YjgA, at 4,274,741 to 4,275,397
_RS20700
ABID97_RS20705: ABID97_RS20705 - molybdopterin adenylyltransferase, at 4,275,519 to 4,276,109
_RS20705
ABID97_RS20710: ABID97_RS20710 - cation:proton antiporter, at 4,276,128 to 4,277,399
_RS20710
ABID97_RS20715: ABID97_RS20715 - heavy metal translocating P-type ATPase, at 4,277,461 to 4,279,734
_RS20715
Position (kb) 4276
4277
4278 Strain fitness (log2 ratio) -2
-1
0
1 at 4275.297 kb on - strand, within ABID97_RS20700 at 4275.585 kb on + strand, within ABID97_RS20705 at 4275.585 kb on + strand, within ABID97_RS20705 at 4275.585 kb on + strand, within ABID97_RS20705 at 4275.586 kb on - strand, within ABID97_RS20705 at 4275.586 kb on - strand, within ABID97_RS20705 at 4275.586 kb on - strand, within ABID97_RS20705 at 4275.586 kb on - strand, within ABID97_RS20705 at 4275.586 kb on - strand, within ABID97_RS20705 at 4275.586 kb on - strand, within ABID97_RS20705 at 4277.098 kb on + strand, within ABID97_RS20710 at 4277.446 kb on - strand at 4277.822 kb on + strand, within ABID97_RS20715 at 4277.823 kb on - strand, within ABID97_RS20715 at 4278.159 kb on - strand, within ABID97_RS20715 at 4278.159 kb on - strand, within ABID97_RS20715 at 4278.342 kb on + strand, within ABID97_RS20715 at 4278.343 kb on - strand, within ABID97_RS20715 at 4278.343 kb on - strand, within ABID97_RS20715
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,275,297 - ABID97_RS20700 0.85 +0.1 4,275,585 + ABID97_RS20705 0.11 -1.1 4,275,585 + ABID97_RS20705 0.11 -2.0 4,275,585 + ABID97_RS20705 0.11 -1.8 4,275,586 - ABID97_RS20705 0.11 -2.2 4,275,586 - ABID97_RS20705 0.11 -2.2 4,275,586 - ABID97_RS20705 0.11 -2.0 4,275,586 - ABID97_RS20705 0.11 -1.8 4,275,586 - ABID97_RS20705 0.11 -2.2 4,275,586 - ABID97_RS20705 0.11 -1.1 4,277,098 + ABID97_RS20710 0.76 -0.4 4,277,446 - -1.2 4,277,822 + ABID97_RS20715 0.16 -0.3 4,277,823 - ABID97_RS20715 0.16 -0.5 4,278,159 - ABID97_RS20715 0.31 -0.1 4,278,159 - ABID97_RS20715 0.31 +0.3 4,278,342 + ABID97_RS20715 0.39 -0.4 4,278,343 - ABID97_RS20715 0.39 -1.0 4,278,343 - ABID97_RS20715 0.39 +1.7
Or see this region's nucleotide sequence