Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19135 and ABID97_RS19140 are separated by 7 nucleotides ABID97_RS19140 and ABID97_RS19145 are separated by 8 nucleotides ABID97_RS19145 and ABID97_RS19150 are separated by 2 nucleotides
ABID97_RS19135: ABID97_RS19135 - hypothetical protein, at 3,949,389 to 3,950,717
_RS19135
ABID97_RS19140: ABID97_RS19140 - glycosyltransferase, at 3,950,725 to 3,951,837
_RS19140
ABID97_RS19145: ABID97_RS19145 - hypothetical protein, at 3,951,846 to 3,952,805
_RS19145
ABID97_RS19150: ABID97_RS19150 - hypothetical protein, at 3,952,808 to 3,953,740
_RS19150
Position (kb)
3950
3951
3952 Strain fitness (log2 ratio)
-1
0
1 at 3950.218 kb on - strand, within ABID97_RS19135 at 3950.541 kb on + strand, within ABID97_RS19135 at 3950.541 kb on + strand, within ABID97_RS19135 at 3950.572 kb on - strand, within ABID97_RS19135 at 3950.698 kb on - strand at 3950.729 kb on - strand at 3950.734 kb on + strand at 3950.923 kb on + strand, within ABID97_RS19140 at 3950.924 kb on - strand, within ABID97_RS19140 at 3950.924 kb on - strand, within ABID97_RS19140 at 3950.986 kb on + strand, within ABID97_RS19140 at 3951.061 kb on + strand, within ABID97_RS19140 at 3951.331 kb on + strand, within ABID97_RS19140 at 3951.527 kb on - strand, within ABID97_RS19140 at 3951.943 kb on - strand, within ABID97_RS19145 at 3952.189 kb on - strand, within ABID97_RS19145 at 3952.360 kb on - strand, within ABID97_RS19145
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 3,950,218 - ABID97_RS19135 0.62 +0.1 3,950,541 + ABID97_RS19135 0.87 -1.5 3,950,541 + ABID97_RS19135 0.87 -1.3 3,950,572 - ABID97_RS19135 0.89 +0.1 3,950,698 - +0.9 3,950,729 - -0.3 3,950,734 + +0.4 3,950,923 + ABID97_RS19140 0.18 +0.3 3,950,924 - ABID97_RS19140 0.18 +0.1 3,950,924 - ABID97_RS19140 0.18 +0.7 3,950,986 + ABID97_RS19140 0.23 +0.4 3,951,061 + ABID97_RS19140 0.30 -0.4 3,951,331 + ABID97_RS19140 0.54 +0.2 3,951,527 - ABID97_RS19140 0.72 -0.0 3,951,943 - ABID97_RS19145 0.10 +0.7 3,952,189 - ABID97_RS19145 0.36 +0.9 3,952,360 - ABID97_RS19145 0.54 +0.8
Or see this region's nucleotide sequence