Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13995 and ABID97_RS14000 are separated by 233 nucleotides ABID97_RS14000 and ABID97_RS14005 are separated by 88 nucleotides ABID97_RS14005 and ABID97_RS14010 are separated by 60 nucleotides ABID97_RS14010 and ABID97_RS14015 are separated by 1 nucleotides ABID97_RS14015 and ABID97_RS14020 are separated by 63 nucleotides
ABID97_RS13995: ABID97_RS13995 - excinuclease ABC subunit UvrB, at 2,907,057 to 2,909,174
_RS13995
ABID97_RS14000: ABID97_RS14000 - Fe-S cluster assembly transcriptional regulator IscR, at 2,909,408 to 2,909,944
_RS14000
ABID97_RS14005: ABID97_RS14005 - IscS subfamily cysteine desulfurase, at 2,910,033 to 2,911,253
_RS14005
ABID97_RS14010: ABID97_RS14010 - Fe-S cluster assembly scaffold IscU, at 2,911,314 to 2,911,730
_RS14010
ABID97_RS14015: ABID97_RS14015 - iron-sulfur cluster assembly protein IscA, at 2,911,732 to 2,912,055
_RS14015
ABID97_RS14020: ABID97_RS14020 - Fe-S protein assembly co-chaperone HscB, at 2,912,119 to 2,912,637
_RS14020
Position (kb)
2910
2911
2912 Strain fitness (log2 ratio)
-1
0
1 at 2909.172 kb on + strand at 2909.243 kb on + strand at 2909.244 kb on - strand at 2909.386 kb on + strand at 2909.998 kb on + strand at 2911.308 kb on + strand at 2911.308 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,909,172 + +0.1 2,909,243 + -0.9 2,909,244 - -0.3 2,909,386 + -0.8 2,909,998 + -0.3 2,911,308 + -0.5 2,911,308 + -0.4
Or see this region's nucleotide sequence