Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07055 and ABID97_RS07060 are separated by 56 nucleotides ABID97_RS07060 and ABID97_RS07065 are separated by 4 nucleotides
ABID97_RS07055: ABID97_RS07055 - dipeptide ABC transporter ATP-binding protein, at 1,493,650 to 1,494,678
_RS07055
ABID97_RS07060: ABID97_RS07060 - 4,5-DOPA dioxygenase extradiol, at 1,494,735 to 1,495,667
_RS07060
ABID97_RS07065: ABID97_RS07065 - glucose-6-phosphate dehydrogenase, at 1,495,672 to 1,497,135
_RS07065
Position (kb)
1494
1495
1496 Strain fitness (log2 ratio)
-1
0
1 at 1493.893 kb on + strand, within ABID97_RS07055 at 1493.893 kb on + strand, within ABID97_RS07055 at 1494.008 kb on - strand, within ABID97_RS07055 at 1494.329 kb on - strand, within ABID97_RS07055 at 1494.329 kb on - strand, within ABID97_RS07055 at 1494.391 kb on + strand, within ABID97_RS07055 at 1494.391 kb on + strand, within ABID97_RS07055 at 1494.392 kb on - strand, within ABID97_RS07055 at 1494.392 kb on - strand, within ABID97_RS07055 at 1494.392 kb on - strand, within ABID97_RS07055 at 1494.454 kb on + strand, within ABID97_RS07055 at 1494.457 kb on - strand, within ABID97_RS07055 at 1494.676 kb on + strand at 1494.677 kb on - strand at 1495.284 kb on + strand, within ABID97_RS07060 at 1495.285 kb on - strand, within ABID97_RS07060 at 1495.507 kb on - strand, within ABID97_RS07060 at 1495.507 kb on - strand, within ABID97_RS07060 at 1495.554 kb on + strand, within ABID97_RS07060 at 1495.554 kb on + strand, within ABID97_RS07060 at 1495.558 kb on - strand, within ABID97_RS07060 at 1495.614 kb on + strand at 1495.615 kb on - strand at 1495.751 kb on + strand at 1495.752 kb on - strand at 1496.072 kb on + strand, within ABID97_RS07065 at 1496.150 kb on + strand, within ABID97_RS07065 at 1496.150 kb on + strand, within ABID97_RS07065 at 1496.151 kb on - strand, within ABID97_RS07065 at 1496.151 kb on - strand, within ABID97_RS07065 at 1496.151 kb on - strand, within ABID97_RS07065 at 1496.288 kb on + strand, within ABID97_RS07065 at 1496.288 kb on + strand, within ABID97_RS07065 at 1496.288 kb on + strand, within ABID97_RS07065 at 1496.288 kb on + strand, within ABID97_RS07065 at 1496.289 kb on - strand, within ABID97_RS07065 at 1496.474 kb on + strand, within ABID97_RS07065 at 1496.475 kb on - strand, within ABID97_RS07065 at 1496.619 kb on - strand, within ABID97_RS07065
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,493,893 + ABID97_RS07055 0.24 -0.6 1,493,893 + ABID97_RS07055 0.24 +1.1 1,494,008 - ABID97_RS07055 0.35 -0.2 1,494,329 - ABID97_RS07055 0.66 -0.4 1,494,329 - ABID97_RS07055 0.66 -0.8 1,494,391 + ABID97_RS07055 0.72 +0.6 1,494,391 + ABID97_RS07055 0.72 +0.6 1,494,392 - ABID97_RS07055 0.72 +0.4 1,494,392 - ABID97_RS07055 0.72 -1.0 1,494,392 - ABID97_RS07055 0.72 -0.2 1,494,454 + ABID97_RS07055 0.78 +1.4 1,494,457 - ABID97_RS07055 0.78 -0.1 1,494,676 + -0.1 1,494,677 - -0.3 1,495,284 + ABID97_RS07060 0.59 +0.5 1,495,285 - ABID97_RS07060 0.59 +0.1 1,495,507 - ABID97_RS07060 0.83 +0.4 1,495,507 - ABID97_RS07060 0.83 +0.8 1,495,554 + ABID97_RS07060 0.88 +0.2 1,495,554 + ABID97_RS07060 0.88 +0.2 1,495,558 - ABID97_RS07060 0.88 +0.1 1,495,614 + +0.3 1,495,615 - +1.1 1,495,751 + -0.8 1,495,752 - +0.9 1,496,072 + ABID97_RS07065 0.27 -0.3 1,496,150 + ABID97_RS07065 0.33 -0.4 1,496,150 + ABID97_RS07065 0.33 -1.4 1,496,151 - ABID97_RS07065 0.33 -0.4 1,496,151 - ABID97_RS07065 0.33 +0.0 1,496,151 - ABID97_RS07065 0.33 -0.1 1,496,288 + ABID97_RS07065 0.42 -0.1 1,496,288 + ABID97_RS07065 0.42 +0.5 1,496,288 + ABID97_RS07065 0.42 +0.9 1,496,288 + ABID97_RS07065 0.42 -0.2 1,496,289 - ABID97_RS07065 0.42 -0.3 1,496,474 + ABID97_RS07065 0.55 -0.4 1,496,475 - ABID97_RS07065 0.55 -0.0 1,496,619 - ABID97_RS07065 0.65 -0.4
Or see this region's nucleotide sequence