Strain Fitness in Escherichia coli BW25113 around b2153

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyeiB and folE are separated by 16 nucleotidesfolE and yeiG are separated by 257 nucleotides b2152: yeiB - conserved inner membrane protein (NCBI), at 2,239,832 to 2,240,989 yeiB b2153: folE - GTP cyclohydrolase I (NCBI), at 2,241,006 to 2,241,674 folE b2154: yeiG - predicted esterase (NCBI), at 2,241,932 to 2,242,768 yeiG Position (kb) 2241 2242Strain fitness (log2 ratio) -1 0 1at 2240.119 kb on - strand, within yeiBat 2240.217 kb on + strand, within yeiBat 2240.262 kb on - strand, within yeiBat 2240.313 kb on - strand, within yeiBat 2240.566 kb on + strand, within yeiBat 2240.566 kb on + strand, within yeiBat 2240.778 kb on + strand, within yeiBat 2240.781 kb on + strand, within yeiBat 2240.781 kb on + strand, within yeiBat 2240.825 kb on - strand, within yeiBat 2240.882 kb on - strandat 2240.889 kb on + strandat 2240.889 kb on + strandat 2240.891 kb on - strandat 2241.735 kb on + strandat 2241.778 kb on - strandat 2241.778 kb on - strandat 2241.884 kb on - strandat 2241.884 kb on - strandat 2242.006 kb on - strandat 2242.045 kb on + strand, within yeiGat 2242.062 kb on - strand, within yeiGat 2242.062 kb on - strand, within yeiGat 2242.149 kb on + strand, within yeiGat 2242.453 kb on + strand, within yeiGat 2242.453 kb on + strand, within yeiGat 2242.456 kb on - strand, within yeiGat 2242.504 kb on + strand, within yeiGat 2242.626 kb on - strand, within yeiG

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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2,240,119 - yeiB b2152 0.25 +0.5
2,240,217 + yeiB b2152 0.33 +0.0
2,240,262 - yeiB b2152 0.37 -0.5
2,240,313 - yeiB b2152 0.42 -0.1
2,240,566 + yeiB b2152 0.63 -0.3
2,240,566 + yeiB b2152 0.63 -1.6
2,240,778 + yeiB b2152 0.82 +0.6
2,240,781 + yeiB b2152 0.82 -0.7
2,240,781 + yeiB b2152 0.82 -0.1
2,240,825 - yeiB b2152 0.86 +0.4
2,240,882 - +0.8
2,240,889 + +0.3
2,240,889 + -1.3
2,240,891 - +0.6
2,241,735 + -0.1
2,241,778 - -0.6
2,241,778 - +0.1
2,241,884 - +0.4
2,241,884 - +0.5
2,242,006 - +0.6
2,242,045 + yeiG b2154 0.14 +0.5
2,242,062 - yeiG b2154 0.16 +0.2
2,242,062 - yeiG b2154 0.16 +0.5
2,242,149 + yeiG b2154 0.26 +0.1
2,242,453 + yeiG b2154 0.62 -0.1
2,242,453 + yeiG b2154 0.62 +1.6
2,242,456 - yeiG b2154 0.63 +0.9
2,242,504 + yeiG b2154 0.68 -0.1
2,242,626 - yeiG b2154 0.83 +0.5

Or see this region's nucleotide sequence