Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30510

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,821,706	-		PFLU_RS08155	0.15	+0.7
1,821,770	+		PFLU_RS08155	0.21	-2.0
1,821,828	+		PFLU_RS08155	0.26	+0.7
1,821,834	+		PFLU_RS08155	0.26	+0.7
1,821,835	-		PFLU_RS08155	0.26	+0.7
1,821,840	+		PFLU_RS08155	0.27	-1.9
1,821,840	+		PFLU_RS08155	0.27	+1.2
1,821,841	-		PFLU_RS08155	0.27	-2.5
1,821,841	-		PFLU_RS08155	0.27	-2.1
1,821,979	-		PFLU_RS08155	0.39	+0.7
1,822,002	-		PFLU_RS08155	0.41	-0.3
1,822,050	+		PFLU_RS08155	0.45	+0.4
1,822,051	-		PFLU_RS08155	0.45	-1.3
1,822,124	+		PFLU_RS08155	0.52	-0.3
1,822,339	+		PFLU_RS08155	0.71	+0.7
1,822,340	-		PFLU_RS08155	0.71	-1.3
1,822,341	+		PFLU_RS08155	0.71	-0.3
1,822,344	+		PFLU_RS08155	0.71	-0.6
1,822,344	+		PFLU_RS08155	0.71	-0.3
1,822,373	+		PFLU_RS08155	0.74	-1.0
1,822,386	+		PFLU_RS08155	0.75	-0.9
1,822,479	+		PFLU_RS08155	0.83	-0.3
1,822,520	+		PFLU_RS08155	0.87	-0.3
1,822,585	-				-0.9
1,822,624	-				-0.3
1,822,877	+		PFLU_RS30510	0.17	-0.9
1,822,888	+		PFLU_RS30510	0.18	-0.6
1,822,904	+		PFLU_RS30510	0.19	-1.1
1,822,993	+		PFLU_RS30510	0.26	-0.8
1,822,995	+		PFLU_RS30510	0.26	-0.4
1,822,996	-		PFLU_RS30510	0.26	-0.8
1,823,084	+		PFLU_RS30510	0.34	-0.9
1,823,085	-		PFLU_RS30510	0.34	-1.9
1,823,168	-		PFLU_RS30510	0.41	+0.7
1,823,170	-		PFLU_RS30510	0.41	-0.9
1,823,264	+		PFLU_RS30510	0.48	-1.4
1,823,303	+		PFLU_RS30510	0.52	+0.1
1,823,303	+		PFLU_RS30510	0.52	-1.7
1,823,333	+		PFLU_RS30510	0.54	+1.2
1,823,380	+		PFLU_RS30510	0.58	-1.0
1,823,635	-		PFLU_RS30510	0.79	+0.1
1,823,636	+		PFLU_RS30510	0.79	-1.6
1,823,636	+		PFLU_RS30510	0.79	-0.6
1,823,636	+		PFLU_RS30510	0.79	-0.6
1,823,744	-		PFLU_RS30510	0.88	-0.3
1,823,744	-		PFLU_RS30510	0.88	+0.7
1,823,919	-				-0.4
1,823,920	+				+0.7
1,824,115	-				+0.4
1,824,115	-				-1.3
1,824,173	-		PFLU_RS08160	0.15	-1.7
1,824,280	-		PFLU_RS08160	0.31	-1.1
1,824,331	+		PFLU_RS08160	0.39	-0.9
1,824,332	-		PFLU_RS08160	0.40	-1.9
1,824,340	+		PFLU_RS08160	0.41	-0.3
1,824,340	+		PFLU_RS08160	0.41	+0.7
1,824,340	+		PFLU_RS08160	0.41	-1.7
1,824,340	+		PFLU_RS08160	0.41	-0.9
1,824,340	+		PFLU_RS08160	0.41	-1.1
1,824,340	+		PFLU_RS08160	0.41	-1.4
1,824,340	+		PFLU_RS08160	0.41	-0.3
1,824,340	+		PFLU_RS08160	0.41	-0.6
1,824,340	+		PFLU_RS08160	0.41	-1.3
1,824,341	-		PFLU_RS08160	0.41	-1.9
1,824,341	-		PFLU_RS08160	0.41	+0.3
1,824,341	-		PFLU_RS08160	0.41	+0.7
1,824,341	-		PFLU_RS08160	0.41	-2.4
1,824,341	-		PFLU_RS08160	0.41	-2.2
1,824,341	-		PFLU_RS08160	0.41	-0.6
1,824,341	-		PFLU_RS08160	0.41	-2.4
1,824,341	-		PFLU_RS08160	0.41	+0.9
1,824,341	-		PFLU_RS08160	0.41	-0.6
1,824,341	-		PFLU_RS08160	0.41	-0.9
1,824,341	-		PFLU_RS08160	0.41	+0.1
1,824,341	-		PFLU_RS08160	0.41	-0.9
1,824,341	-		PFLU_RS08160	0.41	-1.7
1,824,341	-		PFLU_RS08160	0.41	-1.1
1,824,341	-		PFLU_RS08160	0.41	-1.7
1,824,341	-		PFLU_RS08160	0.41	+0.1
1,824,346	+		PFLU_RS08160	0.42	-0.6
1,824,346	+		PFLU_RS08160	0.42	-1.3
1,824,346	+		PFLU_RS08160	0.42	-0.9
1,824,347	-		PFLU_RS08160	0.42	-1.1
1,824,347	-		PFLU_RS08160	0.42	+0.1
1,824,347	-		PFLU_RS08160	0.42	+0.1
1,824,347	-		PFLU_RS08160	0.42	-1.1
1,824,349	+		PFLU_RS08160	0.42	-0.6
1,824,349	+		PFLU_RS08160	0.42	-1.6
1,824,349	+		PFLU_RS08160	0.42	-1.9
1,824,349	+		PFLU_RS08160	0.42	-1.1
1,824,349	+		PFLU_RS08160	0.42	-1.1
1,824,349	+		PFLU_RS08160	0.42	+0.1
1,824,349	+		PFLU_RS08160	0.42	-0.3
1,824,350	-		PFLU_RS08160	0.42	-1.1
1,824,350	-		PFLU_RS08160	0.42	-0.3
1,824,350	-		PFLU_RS08160	0.42	+1.3
1,824,350	-		PFLU_RS08160	0.42	+0.7
1,824,350	-		PFLU_RS08160	0.42	-0.6
1,824,350	-		PFLU_RS08160	0.42	-2.3
1,824,350	-		PFLU_RS08160	0.42	+1.7
1,824,350	-		PFLU_RS08160	0.42	-0.6
1,824,350	-		PFLU_RS08160	0.42	+0.7
1,824,350	-		PFLU_RS08160	0.42	-0.3
1,824,350	-		PFLU_RS08160	0.42	-1.9
1,824,432	-		PFLU_RS08160	0.55	-2.6
1,824,444	-		PFLU_RS08160	0.57	-1.3
1,824,514	+		PFLU_RS08160	0.68	+0.7
1,824,514	+		PFLU_RS08160	0.68	-1.4
1,824,515	-		PFLU_RS08160	0.68	-0.9
1,824,551	-		PFLU_RS08160	0.73	-0.3
1,824,551	-		PFLU_RS08160	0.73	-0.9
1,824,551	-		PFLU_RS08160	0.73	-2.9
1,824,557	+		PFLU_RS08160	0.74	-1.6
1,824,574	+		PFLU_RS08160	0.77	+0.7
1,824,582	+		PFLU_RS08160	0.78	-0.9
1,824,588	+		PFLU_RS08160	0.79	-0.9
1,824,589	-		PFLU_RS08160	0.79	+1.7
1,824,589	-		PFLU_RS08160	0.79	+1.7
1,824,594	+		PFLU_RS08160	0.80	-0.3
1,824,634	+		PFLU_RS08160	0.86	+0.1
1,824,634	+		PFLU_RS08160	0.86	-1.4
1,824,635	-		PFLU_RS08160	0.87	-2.4
1,824,699	+				+0.1
1,824,700	-				+2.5
1,824,774	+		PFLU_RS08165	0.26	-2.0
1,824,775	-		PFLU_RS08165	0.26	+0.7
1,824,784	-		PFLU_RS08165	0.30	+0.7
1,824,786	-		PFLU_RS08165	0.31	+1.7
1,824,836	+		PFLU_RS08165	0.56	-2.6
1,824,837	-		PFLU_RS08165	0.56	+1.7
1,824,839	+		PFLU_RS08165	0.57	-2.4
1,824,839	+		PFLU_RS08165	0.57	-0.3
1,824,839	+		PFLU_RS08165	0.57	-2.2
1,824,840	-		PFLU_RS08165	0.57	-0.3