Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28670

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
6,378,584	+		PFLU_RS28665	0.47	-0.6
6,378,584	+		PFLU_RS28665	0.47	-0.4
6,378,584	+		PFLU_RS28665	0.47	+0.1
6,378,584	+		PFLU_RS28665	0.47	+0.8
6,378,584	+		PFLU_RS28665	0.47	-0.2
6,378,584	+		PFLU_RS28665	0.47	+0.7
6,378,584	+		PFLU_RS28665	0.47	+0.5
6,378,584	+		PFLU_RS28665	0.47	+0.8
6,378,585	-		PFLU_RS28665	0.47	-0.0
6,378,585	-		PFLU_RS28665	0.47	+0.3
6,378,644	+		PFLU_RS28665	0.51	-0.1
6,378,644	+		PFLU_RS28665	0.51	+0.0
6,378,644	+		PFLU_RS28665	0.51	+0.1
6,378,644	+		PFLU_RS28665	0.51	+0.2
6,378,644	+		PFLU_RS28665	0.51	-0.1
6,378,644	+		PFLU_RS28665	0.51	-2.0
6,378,644	+		PFLU_RS28665	0.51	+0.8
6,378,644	+		PFLU_RS28665	0.51	-0.3
6,378,644	+		PFLU_RS28665	0.51	-0.4
6,378,644	+		PFLU_RS28665	0.51	+0.1
6,378,644	+		PFLU_RS28665	0.51	-1.9
6,378,644	+		PFLU_RS28665	0.51	-0.2
6,378,644	+		PFLU_RS28665	0.51	+1.4
6,378,644	+		PFLU_RS28665	0.51	-1.7
6,378,644	+		PFLU_RS28665	0.51	+0.0
6,378,644	+		PFLU_RS28665	0.51	-0.7
6,378,644	+		PFLU_RS28665	0.51	+0.1
6,378,644	+		PFLU_RS28665	0.51	+0.3
6,378,645	-		PFLU_RS28665	0.51	-2.5
6,378,645	-		PFLU_RS28665	0.51	-0.7
6,378,645	-		PFLU_RS28665	0.51	-1.7
6,378,645	-		PFLU_RS28665	0.51	+0.5
6,378,645	-		PFLU_RS28665	0.51	+0.1
6,378,645	-		PFLU_RS28665	0.51	+1.5
6,378,645	-		PFLU_RS28665	0.51	-0.6
6,378,645	-		PFLU_RS28665	0.51	-1.1
6,378,645	-		PFLU_RS28665	0.51	-0.7
6,378,645	-		PFLU_RS28665	0.51	-1.9
6,378,645	-		PFLU_RS28665	0.51	+0.1
6,378,645	-		PFLU_RS28665	0.51	-1.5
6,378,645	-		PFLU_RS28665	0.51	+0.4
6,378,645	-		PFLU_RS28665	0.51	-0.2
6,378,645	-		PFLU_RS28665	0.51	+1.3
6,378,666	+		PFLU_RS28665	0.52	+0.6
6,378,666	+		PFLU_RS28665	0.52	-0.5
6,378,666	+		PFLU_RS28665	0.52	+1.1
6,378,666	+		PFLU_RS28665	0.52	-0.3
6,378,666	+		PFLU_RS28665	0.52	+0.5
6,378,666	+		PFLU_RS28665	0.52	+0.6
6,378,667	-		PFLU_RS28665	0.52	-2.5
6,378,667	-		PFLU_RS28665	0.52	-0.2
6,378,667	-		PFLU_RS28665	0.52	+1.0
6,378,667	-		PFLU_RS28665	0.52	+0.4
6,378,667	-		PFLU_RS28665	0.52	-0.7
6,378,667	-		PFLU_RS28665	0.52	-0.3
6,378,667	-		PFLU_RS28665	0.52	-0.1
6,378,667	-		PFLU_RS28665	0.52	-0.3
6,378,812	+		PFLU_RS28665	0.62	-0.8
6,378,812	+		PFLU_RS28665	0.62	-0.9
6,378,812	+		PFLU_RS28665	0.62	-0.2
6,378,812	+		PFLU_RS28665	0.62	-0.6
6,378,812	+		PFLU_RS28665	0.62	+0.3
6,378,813	-		PFLU_RS28665	0.62	-0.8
6,378,813	-		PFLU_RS28665	0.62	-0.1
6,378,813	-		PFLU_RS28665	0.62	-1.2
6,378,821	+		PFLU_RS28665	0.63	-0.0
6,378,821	+		PFLU_RS28665	0.63	+0.8
6,378,821	+		PFLU_RS28665	0.63	+0.9
6,378,821	+		PFLU_RS28665	0.63	+0.9
6,378,821	+		PFLU_RS28665	0.63	-1.9
6,378,822	-		PFLU_RS28665	0.63	+0.3
6,378,822	-		PFLU_RS28665	0.63	+1.1
6,378,822	-		PFLU_RS28665	0.63	-1.5
6,378,863	-		PFLU_RS28665	0.65	+0.8
6,378,962	+		PFLU_RS28665	0.72	+1.3
6,378,962	+		PFLU_RS28665	0.72	-1.0
6,378,962	+		PFLU_RS28665	0.72	-0.5
6,378,962	+		PFLU_RS28665	0.72	-0.6
6,378,962	+		PFLU_RS28665	0.72	-1.1
6,378,963	-		PFLU_RS28665	0.72	-1.1
6,378,963	-		PFLU_RS28665	0.72	+1.6
6,378,963	-		PFLU_RS28665	0.72	+0.6
6,378,963	-		PFLU_RS28665	0.72	-0.4
6,378,963	-		PFLU_RS28665	0.72	+0.0
6,378,968	+		PFLU_RS28665	0.72	-1.4
6,378,968	+		PFLU_RS28665	0.72	-0.6
6,378,969	-		PFLU_RS28665	0.72	+0.2
6,378,998	+		PFLU_RS28665	0.74	-0.2
6,378,999	-		PFLU_RS28665	0.74	-0.6
6,379,218	+		PFLU_RS28665	0.89	+0.3
6,379,219	-		PFLU_RS28665	0.89	-0.2
6,379,220	+		PFLU_RS28665	0.89	-0.8
6,379,220	+		PFLU_RS28665	0.89	+0.8
6,379,220	+		PFLU_RS28665	0.89	-2.0
6,379,220	+		PFLU_RS28665	0.89	+0.3
6,379,220	+		PFLU_RS28665	0.89	+1.3
6,379,221	-		PFLU_RS28665	0.89	-0.6
6,379,221	-		PFLU_RS28665	0.89	-1.1
6,379,221	-		PFLU_RS28665	0.89	+0.2
6,379,221	-		PFLU_RS28665	0.89	-1.1
6,379,221	-		PFLU_RS28665	0.89	-2.3
6,379,344	-				-0.4
6,379,373	+				+0.9
6,379,373	+				-1.0
6,379,373	+				+2.1
6,379,373	+				+0.4
6,379,373	+				-0.2
6,379,373	+				+0.1
6,379,373	+				-0.8
6,379,373	+				+0.6
6,379,373	+				+0.3
6,379,373	+				+1.4
6,379,373	+				-1.1
6,379,373	+				+0.2
6,379,373	+				-0.1
6,379,373	+				-1.1
6,379,373	+				-0.1
6,379,373	+				-0.9
6,379,374	-				-0.2
6,379,374	-				+1.0
6,379,374	-				-2.6
6,379,374	-				-1.3
6,379,374	-				-0.9
6,379,374	-				-1.8
6,379,374	-				+0.6
6,379,374	-				-0.9
6,379,374	-				-0.8
6,379,374	-				+0.1
6,379,374	-				-0.7
6,379,374	-				+0.9
6,379,374	-				-0.6
6,379,429	-				+0.7
6,379,429	-				+0.6
6,379,479	+				-0.7
6,379,479	+				-1.3
6,379,479	+				-2.1
6,379,480	-				+0.2
6,379,481	+				+0.8
6,379,481	+				-0.5
6,379,481	+				-0.6
6,379,481	+				+0.1
6,379,481	+				-0.5
6,379,481	+				-2.0
6,379,482	-				+0.2
6,379,482	-				-0.6
6,379,497	+				+0.0
6,379,497	+				+1.2
6,379,497	+				+0.5
6,379,498	-				+0.4
6,380,206	+				-0.6
6,380,207	-				+0.7
6,380,207	-				-0.3
6,380,247	+				+0.4
6,380,247	+				+0.3
6,380,247	+				-0.1
6,380,247	+				+0.1
6,380,247	+				+0.2
6,380,247	+				-0.1
6,380,247	+				+0.1
6,380,247	+				+0.3
6,380,247	+				+1.2
6,380,248	-				+0.1
6,380,248	-				-0.7
6,380,274	+				+0.7
6,380,274	+				-1.8
6,380,274	+				-0.4
6,380,274	+				+0.3
6,380,274	+				+0.4
6,380,275	-				-0.1
6,380,275	-				+0.0
6,380,275	-				+0.0
6,380,275	-				-0.4
6,380,275	-				-0.1
6,380,383	+		PFLU_RS28675	0.18	-1.2
6,380,399	+		PFLU_RS28675	0.19	+0.1
6,380,400	-		PFLU_RS28675	0.19	-0.1
6,380,448	+		PFLU_RS28675	0.25	-0.3
6,380,448	+		PFLU_RS28675	0.25	+1.3
6,380,449	-		PFLU_RS28675	0.25	+0.6
6,380,449	-		PFLU_RS28675	0.25	-1.2
6,380,449	-		PFLU_RS28675	0.25	+0.8
6,380,449	-		PFLU_RS28675	0.25	+0.3
6,380,471	+		PFLU_RS28675	0.27	+0.4
6,380,471	+		PFLU_RS28675	0.27	+0.6
6,380,471	+		PFLU_RS28675	0.27	+0.2
6,380,471	+		PFLU_RS28675	0.27	+1.0
6,380,471	+		PFLU_RS28675	0.27	-0.2
6,380,471	+		PFLU_RS28675	0.27	-1.3
6,380,471	+		PFLU_RS28675	0.27	-0.2
6,380,471	+		PFLU_RS28675	0.27	-1.0
6,380,471	+		PFLU_RS28675	0.27	+0.3
6,380,472	-		PFLU_RS28675	0.27	-0.5
6,380,472	-		PFLU_RS28675	0.27	+1.3
6,380,472	-		PFLU_RS28675	0.27	-2.4
6,380,472	-		PFLU_RS28675	0.27	+1.2
6,380,472	-		PFLU_RS28675	0.27	+0.4
6,380,472	-		PFLU_RS28675	0.27	-1.0
6,380,472	-		PFLU_RS28675	0.27	-0.1
6,380,472	-		PFLU_RS28675	0.27	-0.4
6,380,520	+		PFLU_RS28675	0.33	-1.6
6,380,562	+		PFLU_RS28675	0.37	-0.5
6,380,563	-		PFLU_RS28675	0.37	+1.1
6,380,563	-		PFLU_RS28675	0.37	-0.8
6,380,563	-		PFLU_RS28675	0.37	+0.8
6,380,563	-		PFLU_RS28675	0.37	-1.0
6,380,563	-		PFLU_RS28675	0.37	+0.1
6,380,620	-		PFLU_RS28675	0.43	+0.9
6,380,760	+		PFLU_RS28675	0.59	+0.1
6,380,760	+		PFLU_RS28675	0.59	+0.3
6,380,760	+		PFLU_RS28675	0.59	-2.1
6,380,760	+		PFLU_RS28675	0.59	+1.0
6,380,760	+		PFLU_RS28675	0.59	-0.4
6,380,760	+		PFLU_RS28675	0.59	-0.1
6,380,760	+		PFLU_RS28675	0.59	-3.1
6,380,760	+		PFLU_RS28675	0.59	+2.8
6,380,760	+		PFLU_RS28675	0.59	-0.3
6,380,760	+		PFLU_RS28675	0.59	+0.1
6,380,760	+		PFLU_RS28675	0.59	+0.8
6,380,760	+		PFLU_RS28675	0.59	-0.5
6,380,760	+		PFLU_RS28675	0.59	-1.0
6,380,760	+		PFLU_RS28675	0.59	-1.1
6,380,760	+		PFLU_RS28675	0.59	+2.2
6,380,761	-		PFLU_RS28675	0.59	-1.3
6,380,761	-		PFLU_RS28675	0.59	-0.4
6,380,761	-		PFLU_RS28675	0.59	+0.6
6,380,761	-		PFLU_RS28675	0.59	-1.0
6,380,761	-		PFLU_RS28675	0.59	+1.7
6,380,761	-		PFLU_RS28675	0.59	-0.6
6,380,761	-		PFLU_RS28675	0.59	+0.5
6,380,761	-		PFLU_RS28675	0.59	-0.2
6,380,761	-		PFLU_RS28675	0.59	+0.2
6,380,761	-		PFLU_RS28675	0.59	+2.5
6,380,761	-		PFLU_RS28675	0.59	+0.4
6,380,761	-		PFLU_RS28675	0.59	+1.4
6,380,761	-		PFLU_RS28675	0.59	-0.6
6,380,761	-		PFLU_RS28675	0.59	+0.3
6,380,776	+		PFLU_RS28675	0.61	+1.6
6,380,818	+		PFLU_RS28675	0.65	+0.7
6,380,819	-		PFLU_RS28675	0.65	-0.2
6,380,870	-		PFLU_RS28675	0.71	+0.0
6,380,881	+		PFLU_RS28675	0.72	-0.0
6,380,881	+		PFLU_RS28675	0.72	+0.5
6,380,907	+		PFLU_RS28675	0.75	-0.9
6,380,907	+		PFLU_RS28675	0.75	+1.0
6,380,907	+		PFLU_RS28675	0.75	-0.4
6,380,908	-		PFLU_RS28675	0.75	+0.2
6,381,100	+				-0.3
6,381,101	-				-1.0
6,381,172	-				+1.8
6,381,190	+				+0.9