Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22595

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,086,568	-		PFLU_RS22585	0.90	-0.1
5,086,717	+				-0.9
5,086,717	+				+0.6
5,086,717	+				+0.1
5,086,717	+				-0.4
5,086,717	+				-0.5
5,086,718	-				+0.6
5,086,718	-				-0.2
5,086,718	-				+0.6
5,086,718	-				+0.1
5,086,718	-				+0.4
5,086,747	+				+0.1
5,086,748	-				+0.3
5,086,748	-				+0.8
5,086,748	-				+0.0
5,086,748	-				+0.7
5,086,748	-				+0.4
5,086,786	+				-0.3
5,086,787	-				-0.1
5,086,964	+		PFLU_RS22590	0.27	+0.2
5,086,965	-		PFLU_RS22590	0.27	-0.3
5,086,965	-		PFLU_RS22590	0.27	-1.4
5,086,965	-		PFLU_RS22590	0.27	+0.6
5,086,986	+		PFLU_RS22590	0.30	-1.3
5,086,987	-		PFLU_RS22590	0.30	+0.4
5,087,111	+		PFLU_RS22590	0.47	-0.9
5,087,262	+		PFLU_RS22590	0.67	-1.5
5,087,262	+		PFLU_RS22590	0.67	+0.2
5,087,262	+		PFLU_RS22590	0.67	+0.2
5,087,262	+		PFLU_RS22590	0.67	-0.6
5,087,262	+		PFLU_RS22590	0.67	+0.4
5,087,262	+		PFLU_RS22590	0.67	+1.0
5,087,262	+		PFLU_RS22590	0.67	-1.5
5,087,262	+		PFLU_RS22590	0.67	+1.0
5,087,262	+		PFLU_RS22590	0.67	+0.2
5,087,262	+		PFLU_RS22590	0.67	+0.2
5,087,262	+		PFLU_RS22590	0.67	+0.2
5,087,262	+		PFLU_RS22590	0.67	+0.5
5,087,262	+		PFLU_RS22590	0.67	+1.3
5,087,263	-		PFLU_RS22590	0.67	-2.3
5,087,263	-		PFLU_RS22590	0.67	+0.7
5,087,263	-		PFLU_RS22590	0.67	+0.0
5,087,263	-		PFLU_RS22590	0.67	-0.2
5,087,263	-		PFLU_RS22590	0.67	-0.7
5,087,263	-		PFLU_RS22590	0.67	+1.4
5,087,263	-		PFLU_RS22590	0.67	-0.4
5,087,263	-		PFLU_RS22590	0.67	-1.1
5,087,263	-		PFLU_RS22590	0.67	+0.3
5,087,263	-		PFLU_RS22590	0.67	+0.5
5,087,263	-		PFLU_RS22590	0.67	-1.8
5,087,263	-		PFLU_RS22590	0.67	-1.2
5,087,272	+		PFLU_RS22590	0.68	+0.4
5,087,328	-		PFLU_RS22590	0.76	-0.2
5,087,400	+		PFLU_RS22590	0.85	+0.6
5,087,400	+		PFLU_RS22590	0.85	+0.0
5,087,400	+		PFLU_RS22590	0.85	-0.5
5,087,400	+		PFLU_RS22590	0.85	-0.8
5,087,400	+		PFLU_RS22590	0.85	-2.1
5,087,400	+		PFLU_RS22590	0.85	+0.2
5,087,401	-		PFLU_RS22590	0.86	-1.1
5,087,401	-		PFLU_RS22590	0.86	+2.2
5,087,401	-		PFLU_RS22590	0.86	+0.3
5,087,401	-		PFLU_RS22590	0.86	+0.6
5,087,401	-		PFLU_RS22590	0.86	+0.5
5,087,401	-		PFLU_RS22590	0.86	-0.7
5,087,401	-		PFLU_RS22590	0.86	+0.2
5,087,401	-		PFLU_RS22590	0.86	+0.6
5,087,401	-		PFLU_RS22590	0.86	+0.6
5,087,481	+				+0.8
5,087,482	-				+0.0
5,087,482	-				+0.2
5,087,555	+				-0.1
5,087,565	+				-1.1
5,087,565	+				-1.2
5,087,565	+				-1.7
5,087,565	+				-1.3
5,087,566	-				-1.3
5,087,566	-				-0.6
5,087,566	-				-2.0
5,087,566	-				+1.0
5,087,569	+				-0.8
5,087,569	+				-0.6
5,087,569	+				-0.3
5,087,569	+				-1.4
5,087,570	-				-2.3
5,087,570	-				-0.2
5,087,598	+				-0.6
5,087,598	+				-1.6
5,087,668	-		PFLU_RS22595	0.10	-1.1
5,087,668	-		PFLU_RS22595	0.10	-0.6
5,087,718	-		PFLU_RS22595	0.15	-0.8
5,087,755	+		PFLU_RS22595	0.19	-0.3
5,087,756	-		PFLU_RS22595	0.19	-3.0
5,087,756	-		PFLU_RS22595	0.19	-1.8
5,087,756	-		PFLU_RS22595	0.19	-1.4
5,087,756	-		PFLU_RS22595	0.19	-1.6
5,087,756	-		PFLU_RS22595	0.19	+1.7
5,087,756	-		PFLU_RS22595	0.19	-1.6
5,087,770	-		PFLU_RS22595	0.21	-2.1
5,087,796	+		PFLU_RS22595	0.23	+0.7
5,087,796	+		PFLU_RS22595	0.23	-0.8
5,087,797	-		PFLU_RS22595	0.23	-0.6
5,087,797	-		PFLU_RS22595	0.23	-1.4
5,087,797	-		PFLU_RS22595	0.23	-1.8
5,087,797	-		PFLU_RS22595	0.23	-1.3
5,087,797	-		PFLU_RS22595	0.23	+0.2
5,087,797	-		PFLU_RS22595	0.23	-1.6
5,087,797	-		PFLU_RS22595	0.23	-1.4
5,087,797	-		PFLU_RS22595	0.23	-0.3
5,087,797	-		PFLU_RS22595	0.23	-1.6
5,087,797	-		PFLU_RS22595	0.23	-2.0
5,087,797	-		PFLU_RS22595	0.23	-1.8
5,087,797	-		PFLU_RS22595	0.23	-1.7
5,087,804	+		PFLU_RS22595	0.24	-0.3
5,087,804	+		PFLU_RS22595	0.24	-1.1
5,087,804	+		PFLU_RS22595	0.24	+1.7
5,087,805	-		PFLU_RS22595	0.24	-2.2
5,087,805	-		PFLU_RS22595	0.24	-0.6
5,087,805	-		PFLU_RS22595	0.24	-3.0
5,087,805	-		PFLU_RS22595	0.24	-1.4
5,087,852	-		PFLU_RS22595	0.29	-1.6
5,087,859	-		PFLU_RS22595	0.30	-2.1
5,087,864	+		PFLU_RS22595	0.30	-0.3
5,087,864	+		PFLU_RS22595	0.30	+0.2
5,087,865	-		PFLU_RS22595	0.30	-2.0
5,087,891	+		PFLU_RS22595	0.33	-1.6
5,087,891	+		PFLU_RS22595	0.33	-1.4
5,087,891	+		PFLU_RS22595	0.33	+1.7
5,087,891	+		PFLU_RS22595	0.33	+0.2
5,087,892	-		PFLU_RS22595	0.33	-0.6
5,087,892	-		PFLU_RS22595	0.33	-1.1
5,088,035	-		PFLU_RS22595	0.48	-0.6
5,088,088	+		PFLU_RS22595	0.53	+1.7
5,088,106	+		PFLU_RS22595	0.55	+0.7
5,088,106	+		PFLU_RS22595	0.55	-0.6
5,088,106	+		PFLU_RS22595	0.55	+0.2
5,088,106	+		PFLU_RS22595	0.55	+0.7
5,088,106	+		PFLU_RS22595	0.55	+1.7
5,088,107	-		PFLU_RS22595	0.55	+0.2
5,088,107	-		PFLU_RS22595	0.55	+1.7
5,088,107	-		PFLU_RS22595	0.55	+0.7
5,088,109	+		PFLU_RS22595	0.55	+1.7
5,088,109	+		PFLU_RS22595	0.55	+1.7
5,088,109	+		PFLU_RS22595	0.55	+0.2
5,088,109	+		PFLU_RS22595	0.55	+0.2
5,088,109	+		PFLU_RS22595	0.55	+1.7
5,088,110	-		PFLU_RS22595	0.55	+0.2
5,088,110	-		PFLU_RS22595	0.55	+0.7
5,088,110	-		PFLU_RS22595	0.55	+1.7
5,088,110	-		PFLU_RS22595	0.55	-0.3
5,088,110	-		PFLU_RS22595	0.55	-0.3
5,088,110	-		PFLU_RS22595	0.55	-0.3
5,088,110	-		PFLU_RS22595	0.55	+0.7
5,088,110	-		PFLU_RS22595	0.55	+1.7
5,088,110	-		PFLU_RS22595	0.55	+1.7
5,088,110	-		PFLU_RS22595	0.55	-0.3
5,088,110	-		PFLU_RS22595	0.55	+1.7
5,088,141	-		PFLU_RS22595	0.58	-0.6
5,088,183	-		PFLU_RS22595	0.63	+0.7
5,088,210	+		PFLU_RS22595	0.65	+1.7
5,088,210	+		PFLU_RS22595	0.65	+0.7
5,088,210	+		PFLU_RS22595	0.65	+0.2
5,088,210	+		PFLU_RS22595	0.65	+1.7
5,088,211	-		PFLU_RS22595	0.66	+1.7
5,088,211	-		PFLU_RS22595	0.66	+0.2
5,088,211	-		PFLU_RS22595	0.66	+0.7
5,088,211	-		PFLU_RS22595	0.66	+0.7
5,088,211	-		PFLU_RS22595	0.66	-0.3
5,088,211	-		PFLU_RS22595	0.66	+0.7
5,088,211	-		PFLU_RS22595	0.66	+1.7
5,088,211	-		PFLU_RS22595	0.66	+0.7
5,088,211	-		PFLU_RS22595	0.66	+0.2
5,088,211	-		PFLU_RS22595	0.66	+1.7
5,088,211	-		PFLU_RS22595	0.66	+1.7
5,088,211	-		PFLU_RS22595	0.66	+1.7
5,088,211	-		PFLU_RS22595	0.66	-0.3
5,088,211	-		PFLU_RS22595	0.66	+0.2
5,088,214	+		PFLU_RS22595	0.66	-0.6
5,088,214	+		PFLU_RS22595	0.66	+1.7
5,088,214	+		PFLU_RS22595	0.66	+1.7
5,088,215	-		PFLU_RS22595	0.66	+1.7
5,088,215	-		PFLU_RS22595	0.66	-0.6
5,088,215	-		PFLU_RS22595	0.66	+0.2
5,088,231	+		PFLU_RS22595	0.68	+0.7
5,088,254	-		PFLU_RS22595	0.70	+0.2
5,088,302	+		PFLU_RS22595	0.75	+0.7
5,088,303	-		PFLU_RS22595	0.75	+0.7
5,088,373	+		PFLU_RS22595	0.82	+0.2
5,088,373	+		PFLU_RS22595	0.82	+0.7
5,088,374	-		PFLU_RS22595	0.82	+1.7
5,088,374	-		PFLU_RS22595	0.82	+1.7
5,088,374	-		PFLU_RS22595	0.82	-0.3
5,088,430	+		PFLU_RS22595	0.88	+0.7
5,088,430	+		PFLU_RS22595	0.88	+1.7
5,088,431	-		PFLU_RS22595	0.88	+0.2
5,088,431	-		PFLU_RS22595	0.88	+0.2
5,088,431	-		PFLU_RS22595	0.88	+1.7
5,088,431	-		PFLU_RS22595	0.88	+0.2
5,088,443	-		PFLU_RS22595	0.89	-1.4
5,088,443	-		PFLU_RS22595	0.89	-0.8
5,088,506	+				+1.7
5,088,507	-				+0.7
5,088,507	-				+1.7
5,088,553	+				+1.7
5,088,554	-				+0.2
5,088,574	+				+0.2
5,088,574	+				-1.1
5,088,574	+				+0.2
5,088,575	-				+0.2
5,088,575	-				+0.2
5,088,575	-				+0.7
5,088,575	-				+0.2
5,088,575	-				+0.2
5,088,630	+				-2.0
5,088,630	+				+0.7
5,088,631	-				-1.1
5,088,631	-				-2.2
5,088,631	-				+0.2
5,088,636	+				-0.3
5,088,636	+				-0.5
5,088,636	+				-0.1
5,088,636	+				+0.4
5,088,637	-				-0.2
5,088,637	-				-1.6
5,088,637	-				-1.6
5,088,637	-				-2.3
5,088,637	-				-0.7
5,088,643	+				-1.7
5,088,644	-				+1.2
5,088,644	-				-0.6
5,088,644	-				+1.9
5,088,657	+				-2.0
5,088,657	+				-2.0
5,088,689	+				+1.7
5,088,689	+				+0.7
5,088,690	-				+0.2
5,088,690	-				+0.9
5,088,690	-				-0.8
5,088,690	-				+0.2
5,088,789	-		PFLU_RS22600	0.23	-0.6
5,088,822	+		PFLU_RS22600	0.28	+2.5
5,088,822	+		PFLU_RS22600	0.28	-0.3
5,088,823	-		PFLU_RS22600	0.28	+2.3
5,088,823	-		PFLU_RS22600	0.28	+0.4
5,088,823	-		PFLU_RS22600	0.28	+0.7
5,088,966	+		PFLU_RS22600	0.52	+0.7
5,088,966	+		PFLU_RS22600	0.52	+0.7
5,088,967	-		PFLU_RS22600	0.53	-0.3
5,088,967	-		PFLU_RS22600	0.53	+0.7
5,088,967	-		PFLU_RS22600	0.53	-0.3
5,088,967	-		PFLU_RS22600	0.53	+3.3
5,088,967	-		PFLU_RS22600	0.53	+1.2
5,088,967	-		PFLU_RS22600	0.53	-0.3
5,088,967	-		PFLU_RS22600	0.53	+3.3
5,088,979	-		PFLU_RS22600	0.55	+1.3
5,089,027	-		PFLU_RS22600	0.63	+0.7
5,089,073	-		PFLU_RS22600	0.71	+0.2
5,089,073	-		PFLU_RS22600	0.71	+1.7
5,089,083	-		PFLU_RS22600	0.72	+3.7
5,089,086	+		PFLU_RS22600	0.73	-0.8
5,089,140	+		PFLU_RS22600	0.82	+0.7
5,089,151	+		PFLU_RS22600	0.84	-0.6
5,089,215	+				-1.3
5,089,215	+				-0.8
5,089,215	+				-0.1
5,089,241	-				-0.6
5,089,312	+				-2.1
5,089,312	+				-0.3
5,089,312	+				-0.6
5,089,312	+				+1.0
5,089,312	+				-1.1
5,089,313	-				+0.9
5,089,313	-				+1.7
5,089,313	-				+2.0
5,089,318	-				-0.4
5,089,343	-				-0.8
5,089,482	+		PFLU_RS22605	0.18	-1.7
5,089,482	+		PFLU_RS22605	0.18	-0.6
5,089,482	+		PFLU_RS22605	0.18	+0.6
5,089,483	-		PFLU_RS22605	0.18	+0.7
5,089,483	-		PFLU_RS22605	0.18	+1.5
5,089,483	-		PFLU_RS22605	0.18	+0.7
5,089,483	-		PFLU_RS22605	0.18	-0.6
5,089,483	-		PFLU_RS22605	0.18	+1.0
5,089,497	+		PFLU_RS22605	0.20	-1.6
5,089,497	+		PFLU_RS22605	0.20	-1.3
5,089,497	+		PFLU_RS22605	0.20	-2.6
5,089,497	+		PFLU_RS22605	0.20	-1.5
5,089,497	+		PFLU_RS22605	0.20	-0.3
5,089,497	+		PFLU_RS22605	0.20	-1.0
5,089,497	+		PFLU_RS22605	0.20	+1.0
5,089,498	-		PFLU_RS22605	0.20	-1.5
5,089,498	-		PFLU_RS22605	0.20	+1.3
5,089,498	-		PFLU_RS22605	0.20	-0.8
5,089,498	-		PFLU_RS22605	0.20	-0.3
5,089,498	-		PFLU_RS22605	0.20	+0.9