Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS15835

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,598,500	-				+0.5
3,598,553	+				+0.2
3,598,674	-				-0.6
3,598,674	-				+0.2
3,598,678	+				+1.0
3,598,678	+				+0.3
3,598,678	+				-0.1
3,598,679	-				-0.6
3,598,679	-				+0.1
3,598,679	-				-0.0
3,598,697	+				+1.2
3,598,697	+				-1.0
3,598,698	-				+0.6
3,598,698	-				+1.8
3,598,698	-				+2.4
3,598,701	+				-1.2
3,598,731	+				-2.0
3,598,733	+				-0.3
3,598,733	+				+0.7
3,598,733	+				-2.0
3,598,733	+				+1.6
3,598,734	-				+0.5
3,598,734	-				-1.6
3,598,734	-				+1.0
3,598,734	-				-0.8
3,598,737	+				+0.4
3,598,737	+				-0.8
3,598,737	+				-0.3
3,598,737	+				+1.0
3,598,737	+				-0.8
3,598,738	-				-1.0
3,598,738	-				-0.5
3,598,738	-				+0.8
3,598,738	-				+1.0
3,598,738	-				-0.6
3,598,738	-				+0.4
3,598,770	+				+0.2
3,598,827	+				+0.1
3,598,834	+				+1.7
3,598,834	+				+0.3
3,598,843	+				+0.9
3,598,844	-				+1.3
3,598,844	-				-1.7
3,598,965	+				-2.5
3,598,965	+				-0.6
3,598,966	-				+0.2
3,599,040	+				-1.5
3,599,231	+		PFLU_RS15830	0.40	+0.6
3,599,232	-		PFLU_RS15830	0.41	-0.0
3,599,232	-		PFLU_RS15830	0.41	-1.6
3,599,232	-		PFLU_RS15830	0.41	-1.3
3,599,232	-		PFLU_RS15830	0.41	+0.4
3,599,517	+				+1.0
3,599,517	+				-2.0
3,599,518	-				+0.7
3,599,518	-				-0.4
3,599,518	-				-0.7
3,599,518	-				+1.2
3,599,518	-				+1.3
3,599,518	-				+0.6
3,599,518	-				+0.3
3,599,542	+				+0.5
3,599,543	-				-0.1
3,599,557	-		PFLU_RS15835	0.10	+0.6
3,599,557	-		PFLU_RS15835	0.10	-0.4
3,599,576	+		PFLU_RS15835	0.11	+1.5
3,599,576	+		PFLU_RS15835	0.11	-0.6
3,599,577	-		PFLU_RS15835	0.11	-1.0
3,599,586	+		PFLU_RS15835	0.12	+0.1
3,599,616	+		PFLU_RS15835	0.14	-1.5
3,599,616	+		PFLU_RS15835	0.14	-1.5
3,599,616	+		PFLU_RS15835	0.14	+1.4
3,599,616	+		PFLU_RS15835	0.14	+0.1
3,599,616	+		PFLU_RS15835	0.14	+0.1
3,599,954	-		PFLU_RS15835	0.37	+1.1
3,599,998	+		PFLU_RS15835	0.40	-0.2
3,599,999	-		PFLU_RS15835	0.40	+1.4
3,600,099	+		PFLU_RS15835	0.47	-0.5
3,600,099	+		PFLU_RS15835	0.47	-0.8
3,600,112	+		PFLU_RS15835	0.47	-1.1
3,600,112	+		PFLU_RS15835	0.47	-0.9
3,600,112	+		PFLU_RS15835	0.47	+0.3
3,600,113	-		PFLU_RS15835	0.48	-0.0
3,600,113	-		PFLU_RS15835	0.48	-0.0
3,600,113	-		PFLU_RS15835	0.48	-0.3
3,600,113	-		PFLU_RS15835	0.48	+0.2
3,600,113	-		PFLU_RS15835	0.48	+0.2
3,600,113	-		PFLU_RS15835	0.48	-1.1
3,600,113	-		PFLU_RS15835	0.48	-0.1
3,600,219	+		PFLU_RS15835	0.55	-0.2
3,600,219	+		PFLU_RS15835	0.55	-0.3
3,600,219	+		PFLU_RS15835	0.55	-0.9
3,600,219	+		PFLU_RS15835	0.55	-1.2
3,600,219	+		PFLU_RS15835	0.55	+1.2
3,600,220	-		PFLU_RS15835	0.55	-0.9
3,600,220	-		PFLU_RS15835	0.55	+0.8
3,600,220	-		PFLU_RS15835	0.55	+0.3
3,600,220	-		PFLU_RS15835	0.55	-0.3
3,600,223	+		PFLU_RS15835	0.55	-0.4
3,600,223	+		PFLU_RS15835	0.55	-1.8
3,600,223	+		PFLU_RS15835	0.55	+0.2
3,600,223	+		PFLU_RS15835	0.55	+1.6
3,600,223	+		PFLU_RS15835	0.55	+0.1
3,600,223	+		PFLU_RS15835	0.55	+0.9
3,600,223	+		PFLU_RS15835	0.55	+0.2
3,600,223	+		PFLU_RS15835	0.55	+2.0
3,600,223	+		PFLU_RS15835	0.55	-0.9
3,600,223	+		PFLU_RS15835	0.55	-0.7
3,600,224	-		PFLU_RS15835	0.55	-0.8
3,600,224	-		PFLU_RS15835	0.55	-1.3
3,600,224	-		PFLU_RS15835	0.55	-2.5
3,600,224	-		PFLU_RS15835	0.55	+0.6
3,600,224	-		PFLU_RS15835	0.55	-0.6
3,600,268	-		PFLU_RS15835	0.58	-2.1
3,600,330	+		PFLU_RS15835	0.62	+1.6
3,600,331	-		PFLU_RS15835	0.62	-0.4
3,600,331	-		PFLU_RS15835	0.62	+1.7
3,600,349	-		PFLU_RS15835	0.63	-1.1
3,600,360	-		PFLU_RS15835	0.64	+0.9
3,600,376	+		PFLU_RS15835	0.65	-0.3
3,600,377	-		PFLU_RS15835	0.65	+2.0
3,600,378	+		PFLU_RS15835	0.65	-2.0
3,600,378	+		PFLU_RS15835	0.65	-0.4
3,600,378	+		PFLU_RS15835	0.65	+0.8
3,600,378	+		PFLU_RS15835	0.65	-1.8
3,600,378	+		PFLU_RS15835	0.65	-0.4
3,600,379	-		PFLU_RS15835	0.65	-1.6
3,600,379	-		PFLU_RS15835	0.65	+1.4
3,600,379	-		PFLU_RS15835	0.65	-1.3
3,600,393	+		PFLU_RS15835	0.66	-0.2
3,600,393	+		PFLU_RS15835	0.66	-0.3
3,600,393	+		PFLU_RS15835	0.66	-0.3
3,600,393	+		PFLU_RS15835	0.66	+2.0
3,600,394	-		PFLU_RS15835	0.66	+0.6
3,600,395	+		PFLU_RS15835	0.66	+2.2
3,600,395	+		PFLU_RS15835	0.66	+0.1
3,600,396	-		PFLU_RS15835	0.67	-0.8
3,600,396	-		PFLU_RS15835	0.67	+0.1
3,600,396	-		PFLU_RS15835	0.67	-2.2
3,600,396	-		PFLU_RS15835	0.67	-1.2
3,600,396	-		PFLU_RS15835	0.67	-1.8
3,600,396	-		PFLU_RS15835	0.67	-0.1
3,600,416	+		PFLU_RS15835	0.68	+0.2
3,600,445	+		PFLU_RS15835	0.70	+0.3
3,600,445	+		PFLU_RS15835	0.70	-0.2
3,600,446	-		PFLU_RS15835	0.70	+0.1
3,600,446	-		PFLU_RS15835	0.70	-0.0
3,600,490	-		PFLU_RS15835	0.73	-1.8
3,600,495	+		PFLU_RS15835	0.73	+0.7
3,600,495	+		PFLU_RS15835	0.73	-0.6
3,600,495	+		PFLU_RS15835	0.73	+0.9
3,600,496	-		PFLU_RS15835	0.73	-0.3
3,600,496	-		PFLU_RS15835	0.73	-1.0
3,600,496	-		PFLU_RS15835	0.73	+1.2
3,600,496	-		PFLU_RS15835	0.73	-1.5
3,600,496	-		PFLU_RS15835	0.73	-0.1
3,600,496	-		PFLU_RS15835	0.73	+0.3
3,600,511	-		PFLU_RS15835	0.74	-0.5
3,600,511	-		PFLU_RS15835	0.74	+1.2
3,600,511	-		PFLU_RS15835	0.74	+0.0
3,600,574	+		PFLU_RS15835	0.78	-0.3
3,600,574	+		PFLU_RS15835	0.78	+0.2
3,600,575	-		PFLU_RS15835	0.79	+0.1
3,600,595	+		PFLU_RS15835	0.80	-2.8
3,600,595	+		PFLU_RS15835	0.80	+1.8
3,600,596	-		PFLU_RS15835	0.80	-0.7
3,600,637	+		PFLU_RS15835	0.83	-0.2
3,600,638	-		PFLU_RS15835	0.83	-0.9
3,600,638	-		PFLU_RS15835	0.83	-0.6
3,600,638	-		PFLU_RS15835	0.83	+0.3
3,600,708	+		PFLU_RS15835	0.88	+0.7
3,600,859	-				-0.4
3,600,859	-				-1.5
3,600,937	+				+0.4
3,600,938	-				+0.3
3,600,938	-				-2.0
3,601,232	+		PFLU_RS15840	0.27	-0.1
3,601,294	-		PFLU_RS15840	0.32	-0.6
3,601,318	+		PFLU_RS15840	0.34	+0.4
3,601,351	-		PFLU_RS15840	0.37	-0.0
3,601,351	-		PFLU_RS15840	0.37	-0.9
3,601,577	+		PFLU_RS15840	0.55	+1.0
3,601,648	+		PFLU_RS15840	0.61	+0.2
3,601,648	+		PFLU_RS15840	0.61	+1.7
3,601,649	-		PFLU_RS15840	0.61	+0.7
3,601,649	-		PFLU_RS15840	0.61	-2.2
3,601,649	-		PFLU_RS15840	0.61	-1.5
3,601,652	+		PFLU_RS15840	0.61	+0.3
3,601,652	+		PFLU_RS15840	0.61	+0.3
3,601,652	+		PFLU_RS15840	0.61	+0.3
3,601,653	-		PFLU_RS15840	0.61	-0.3
3,601,653	-		PFLU_RS15840	0.61	-0.2
3,601,653	-		PFLU_RS15840	0.61	+0.2
3,601,653	-		PFLU_RS15840	0.61	-0.8
3,601,653	-		PFLU_RS15840	0.61	+0.5
3,601,654	+		PFLU_RS15840	0.62	+0.2
3,601,686	+		PFLU_RS15840	0.64	-0.5
3,601,686	+		PFLU_RS15840	0.64	+0.5
3,601,687	-		PFLU_RS15840	0.64	+1.6
3,601,687	-		PFLU_RS15840	0.64	+0.4
3,601,739	+		PFLU_RS15840	0.68	-0.7
3,601,740	-		PFLU_RS15840	0.69	+0.5
3,601,848	-		PFLU_RS15840	0.77	-2.5
3,601,848	-		PFLU_RS15840	0.77	+0.3
3,601,874	+		PFLU_RS15840	0.79	+0.2
3,601,875	-		PFLU_RS15840	0.79	-0.3