Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04360 and PFLU_RS04365 are separated by 27 nucleotides PFLU_RS04365 and PFLU_RS04370 are separated by 1 nucleotides PFLU_RS04370 and PFLU_RS04375 are separated by 33 nucleotides
PFLU_RS04360: PFLU_RS04360 - class II fumarate hydratase, at 985,857 to 987,233
_RS04360
PFLU_RS04365: PFLU_RS04365 - hypothetical protein, at 987,261 to 987,689
_RS04365
PFLU_RS04370: PFLU_RS04370 - superoxide dismutase, at 987,691 to 988,302
_RS04370
PFLU_RS04375: PFLU_RS04375 - ZIP family metal transporter, at 988,336 to 989,229
_RS04375
Position (kb) 987
988 Strain fitness (log2 ratio) -2
-1
0
1
2 at 987.031 kb on + strand, within PFLU_RS04360 at 987.032 kb on - strand, within PFLU_RS04360 at 987.032 kb on - strand, within PFLU_RS04360 at 987.123 kb on + strand at 987.124 kb on - strand at 987.231 kb on + strand at 987.232 kb on - strand at 987.232 kb on - strand at 987.232 kb on - strand at 987.305 kb on + strand, within PFLU_RS04365 at 987.306 kb on - strand, within PFLU_RS04365 at 987.339 kb on + strand, within PFLU_RS04365 at 987.339 kb on + strand, within PFLU_RS04365 at 987.339 kb on + strand, within PFLU_RS04365 at 987.339 kb on + strand, within PFLU_RS04365 at 987.340 kb on - strand, within PFLU_RS04365 at 987.340 kb on - strand, within PFLU_RS04365 at 987.340 kb on - strand, within PFLU_RS04365 at 987.480 kb on + strand, within PFLU_RS04365 at 987.480 kb on + strand, within PFLU_RS04365 at 987.481 kb on - strand, within PFLU_RS04365 at 987.481 kb on - strand, within PFLU_RS04365 at 987.579 kb on + strand, within PFLU_RS04365 at 987.579 kb on + strand, within PFLU_RS04365 at 987.580 kb on - strand, within PFLU_RS04365 at 987.626 kb on + strand, within PFLU_RS04365 at 987.627 kb on - strand, within PFLU_RS04365 at 987.676 kb on - strand at 987.690 kb on + strand at 987.690 kb on + strand at 987.690 kb on + strand at 987.690 kb on + strand at 987.690 kb on + strand at 987.690 kb on + strand at 987.691 kb on - strand at 987.691 kb on - strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.697 kb on + strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.698 kb on - strand at 987.719 kb on - strand at 987.725 kb on - strand at 987.744 kb on + strand at 987.744 kb on + strand at 987.745 kb on - strand at 987.745 kb on - strand at 987.793 kb on + strand, within PFLU_RS04370 at 987.793 kb on + strand, within PFLU_RS04370 at 987.793 kb on + strand, within PFLU_RS04370 at 987.793 kb on + strand, within PFLU_RS04370 at 987.793 kb on + strand, within PFLU_RS04370 at 987.793 kb on + strand, within PFLU_RS04370 at 987.793 kb on + strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.794 kb on - strand, within PFLU_RS04370 at 987.818 kb on + strand, within PFLU_RS04370 at 988.026 kb on + strand, within PFLU_RS04370 at 988.027 kb on - strand, within PFLU_RS04370 at 988.027 kb on - strand, within PFLU_RS04370 at 988.027 kb on - strand, within PFLU_RS04370 at 988.027 kb on - strand, within PFLU_RS04370 at 988.198 kb on + strand, within PFLU_RS04370 at 988.199 kb on - strand, within PFLU_RS04370 at 988.199 kb on - strand, within PFLU_RS04370 at 988.199 kb on - strand, within PFLU_RS04370 at 988.199 kb on - strand, within PFLU_RS04370 at 988.201 kb on + strand, within PFLU_RS04370 at 988.201 kb on + strand, within PFLU_RS04370 at 988.201 kb on + strand, within PFLU_RS04370 at 988.201 kb on + strand, within PFLU_RS04370 at 988.201 kb on + strand, within PFLU_RS04370 at 988.201 kb on + strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.202 kb on - strand, within PFLU_RS04370 at 988.210 kb on + strand, within PFLU_RS04370 at 988.211 kb on - strand, within PFLU_RS04370 at 988.211 kb on - strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.231 kb on + strand, within PFLU_RS04370 at 988.232 kb on - strand, within PFLU_RS04370 at 988.232 kb on - strand, within PFLU_RS04370 at 988.232 kb on - strand, within PFLU_RS04370 at 988.232 kb on - strand, within PFLU_RS04370 at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.246 kb on + strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.247 kb on - strand at 988.254 kb on + strand at 988.255 kb on - strand at 988.255 kb on - strand at 988.255 kb on - strand at 988.315 kb on + strand at 988.315 kb on + strand at 988.316 kb on - strand at 988.316 kb on - strand at 988.316 kb on - strand at 988.325 kb on + strand at 988.325 kb on + strand at 988.325 kb on + strand at 988.325 kb on + strand at 988.325 kb on + strand at 988.325 kb on + strand at 988.325 kb on + strand at 988.326 kb on - strand at 988.326 kb on - strand at 988.326 kb on - strand at 988.326 kb on - strand at 988.413 kb on + strand at 988.413 kb on + strand at 988.413 kb on + strand at 988.413 kb on + strand at 988.413 kb on + strand at 988.413 kb on + strand at 988.414 kb on - strand at 988.414 kb on - strand at 988.414 kb on - strand at 988.414 kb on - strand at 988.469 kb on + strand, within PFLU_RS04375 at 988.545 kb on + strand, within PFLU_RS04375 at 988.545 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.566 kb on + strand, within PFLU_RS04375 at 988.567 kb on - strand, within PFLU_RS04375 at 988.567 kb on - strand, within PFLU_RS04375 at 988.567 kb on - strand, within PFLU_RS04375 at 988.567 kb on - strand, within PFLU_RS04375
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 987,031 + PFLU_RS04360 0.85 -0.5 987,032 - PFLU_RS04360 0.85 -0.1 987,032 - PFLU_RS04360 0.85 -0.5 987,123 + -0.5 987,124 - -0.9 987,231 + +0.4 987,232 - +1.9 987,232 - +0.8 987,232 - -0.2 987,305 + PFLU_RS04365 0.10 +0.1 987,306 - PFLU_RS04365 0.10 +0.5 987,339 + PFLU_RS04365 0.18 +0.6 987,339 + PFLU_RS04365 0.18 +0.7 987,339 + PFLU_RS04365 0.18 +0.1 987,339 + PFLU_RS04365 0.18 +0.4 987,340 - PFLU_RS04365 0.18 +0.8 987,340 - PFLU_RS04365 0.18 +0.4 987,340 - PFLU_RS04365 0.18 +1.3 987,480 + PFLU_RS04365 0.51 +0.7 987,480 + PFLU_RS04365 0.51 +0.2 987,481 - PFLU_RS04365 0.51 -0.0 987,481 - PFLU_RS04365 0.51 +0.7 987,579 + PFLU_RS04365 0.74 -2.1 987,579 + PFLU_RS04365 0.74 -1.0 987,580 - PFLU_RS04365 0.74 -0.5 987,626 + PFLU_RS04365 0.85 +0.1 987,627 - PFLU_RS04365 0.85 +0.6 987,676 - -0.6 987,690 + +0.8 987,690 + +1.1 987,690 + -0.0 987,690 + -0.0 987,690 + -1.0 987,690 + -0.9 987,691 - -0.8 987,691 - -0.7 987,697 + +0.7 987,697 + +1.3 987,697 + +2.4 987,697 + +1.5 987,697 + +0.5 987,697 + -1.2 987,697 + -0.0 987,697 + -1.3 987,697 + +0.6 987,697 + +0.9 987,697 + +1.4 987,697 + -0.1 987,697 + -1.8 987,698 - +0.7 987,698 - -0.6 987,698 - +0.4 987,698 - +0.3 987,698 - +0.7 987,698 - +0.7 987,698 - +0.0 987,698 - +0.4 987,698 - +0.9 987,698 - +0.3 987,698 - +0.9 987,698 - +0.2 987,698 - -0.1 987,698 - -0.2 987,698 - -0.3 987,698 - -0.5 987,719 - -0.1 987,725 - -0.6 987,744 + +0.6 987,744 + +0.2 987,745 - +0.8 987,745 - -0.6 987,793 + PFLU_RS04370 0.17 +0.9 987,793 + PFLU_RS04370 0.17 +0.5 987,793 + PFLU_RS04370 0.17 +0.9 987,793 + PFLU_RS04370 0.17 +0.5 987,793 + PFLU_RS04370 0.17 -0.7 987,793 + PFLU_RS04370 0.17 +0.6 987,793 + PFLU_RS04370 0.17 -0.8 987,794 - PFLU_RS04370 0.17 +0.4 987,794 - PFLU_RS04370 0.17 +0.6 987,794 - PFLU_RS04370 0.17 +0.3 987,794 - PFLU_RS04370 0.17 -0.2 987,794 - PFLU_RS04370 0.17 +0.8 987,794 - PFLU_RS04370 0.17 -1.1 987,794 - PFLU_RS04370 0.17 +1.0 987,794 - PFLU_RS04370 0.17 -0.0 987,794 - PFLU_RS04370 0.17 -0.2 987,794 - PFLU_RS04370 0.17 +0.8 987,818 + PFLU_RS04370 0.21 +0.5 988,026 + PFLU_RS04370 0.55 +0.9 988,027 - PFLU_RS04370 0.55 -1.8 988,027 - PFLU_RS04370 0.55 -0.3 988,027 - PFLU_RS04370 0.55 -0.6 988,027 - PFLU_RS04370 0.55 -0.2 988,198 + PFLU_RS04370 0.83 -0.8 988,199 - PFLU_RS04370 0.83 +0.9 988,199 - PFLU_RS04370 0.83 -0.2 988,199 - PFLU_RS04370 0.83 -0.2 988,199 - PFLU_RS04370 0.83 +0.1 988,201 + PFLU_RS04370 0.83 +0.3 988,201 + PFLU_RS04370 0.83 +1.2 988,201 + PFLU_RS04370 0.83 -0.1 988,201 + PFLU_RS04370 0.83 -1.3 988,201 + PFLU_RS04370 0.83 +0.0 988,201 + PFLU_RS04370 0.83 +0.2 988,202 - PFLU_RS04370 0.83 +0.3 988,202 - PFLU_RS04370 0.83 +0.2 988,202 - PFLU_RS04370 0.83 -0.7 988,202 - PFLU_RS04370 0.83 +0.8 988,202 - PFLU_RS04370 0.83 +1.3 988,202 - PFLU_RS04370 0.83 -1.7 988,202 - PFLU_RS04370 0.83 -0.7 988,210 + PFLU_RS04370 0.85 -0.0 988,211 - PFLU_RS04370 0.85 -0.1 988,211 - PFLU_RS04370 0.85 +0.6 988,231 + PFLU_RS04370 0.88 -1.0 988,231 + PFLU_RS04370 0.88 +0.1 988,231 + PFLU_RS04370 0.88 +0.8 988,231 + PFLU_RS04370 0.88 -1.3 988,231 + PFLU_RS04370 0.88 +1.1 988,231 + PFLU_RS04370 0.88 -0.3 988,231 + PFLU_RS04370 0.88 +1.0 988,232 - PFLU_RS04370 0.88 +1.2 988,232 - PFLU_RS04370 0.88 -0.8 988,232 - PFLU_RS04370 0.88 +0.5 988,232 - PFLU_RS04370 0.88 +0.5 988,246 + -1.3 988,246 + -0.1 988,246 + -0.1 988,246 + +1.1 988,246 + +1.4 988,246 + +0.9 988,246 + -0.2 988,246 + -0.1 988,246 + -0.6 988,246 + -1.2 988,246 + +2.0 988,246 + -1.2 988,246 + +0.5 988,246 + -0.3 988,247 - -0.2 988,247 - -1.5 988,247 - -0.9 988,247 - +1.0 988,247 - +0.5 988,247 - +1.4 988,247 - +1.4 988,247 - +0.2 988,254 + +0.7 988,255 - -0.0 988,255 - +1.4 988,255 - -1.3 988,315 + -1.9 988,315 + -0.3 988,316 - +0.7 988,316 - +2.0 988,316 - +0.9 988,325 + +0.3 988,325 + -0.8 988,325 + +1.4 988,325 + +0.3 988,325 + -1.8 988,325 + +0.5 988,325 + -0.3 988,326 - -1.7 988,326 - -1.0 988,326 - +0.1 988,326 - -2.7 988,413 + -0.0 988,413 + +0.7 988,413 + +0.3 988,413 + +0.7 988,413 + -1.1 988,413 + -0.3 988,414 - +0.9 988,414 - -1.0 988,414 - +0.4 988,414 - -0.6 988,469 + PFLU_RS04375 0.15 +0.2 988,545 + PFLU_RS04375 0.23 +0.4 988,545 + PFLU_RS04375 0.23 -0.7 988,566 + PFLU_RS04375 0.26 +1.1 988,566 + PFLU_RS04375 0.26 +0.7 988,566 + PFLU_RS04375 0.26 -0.8 988,566 + PFLU_RS04375 0.26 -0.5 988,566 + PFLU_RS04375 0.26 -0.1 988,566 + PFLU_RS04375 0.26 -0.3 988,566 + PFLU_RS04375 0.26 +1.5 988,567 - PFLU_RS04375 0.26 +1.7 988,567 - PFLU_RS04375 0.26 +0.2 988,567 - PFLU_RS04375 0.26 -0.7 988,567 - PFLU_RS04375 0.26 +1.6
Or see this region's nucleotide sequence