Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02280 and PFLU_RS02285 are separated by 54 nucleotides PFLU_RS02285 and PFLU_RS02290 are separated by 1 nucleotides
PFLU_RS02280: PFLU_RS02280 - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 520,249 to 523,188
_RS02280
PFLU_RS02285: PFLU_RS02285 - lipopolysaccharide heptosyltransferase II, at 523,243 to 524,277
_RS02285
PFLU_RS02290: PFLU_RS02290 - lipopolysaccharide heptosyltransferase I, at 524,279 to 525,340
_RS02290
Position (kb) 523
524
525 Strain fitness (log2 ratio) -2
-1
0
1
2 at 522.244 kb on + strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.245 kb on - strand, within PFLU_RS02280 at 522.432 kb on + strand, within PFLU_RS02280 at 522.559 kb on + strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.635 kb on - strand, within PFLU_RS02280 at 522.743 kb on + strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.904 kb on - strand at 522.904 kb on - strand at 522.904 kb on - strand at 522.921 kb on + strand at 522.922 kb on - strand at 522.922 kb on - strand at 522.922 kb on - strand at 522.931 kb on + strand at 522.931 kb on + strand at 522.976 kb on + strand at 522.976 kb on + strand at 522.977 kb on - strand at 522.987 kb on + strand at 522.988 kb on - strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.062 kb on + strand at 523.062 kb on + strand at 523.062 kb on + strand at 523.063 kb on - strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.195 kb on - strand at 523.195 kb on - strand at 523.195 kb on - strand at 523.198 kb on - strand at 523.198 kb on - strand at 523.198 kb on - strand at 523.198 kb on - strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.213 kb on - strand at 523.213 kb on - strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.248 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 522,244 + PFLU_RS02280 0.68 +0.9 522,244 + PFLU_RS02280 0.68 +0.6 522,244 + PFLU_RS02280 0.68 -0.3 522,244 + PFLU_RS02280 0.68 +0.6 522,245 - PFLU_RS02280 0.68 +0.8 522,432 + PFLU_RS02280 0.74 +0.6 522,559 + PFLU_RS02280 0.79 +0.6 522,560 - PFLU_RS02280 0.79 +0.5 522,560 - PFLU_RS02280 0.79 +0.1 522,560 - PFLU_RS02280 0.79 +0.3 522,560 - PFLU_RS02280 0.79 -0.1 522,635 - PFLU_RS02280 0.81 +0.2 522,743 + PFLU_RS02280 0.85 -1.2 522,744 - PFLU_RS02280 0.85 -0.4 522,744 - PFLU_RS02280 0.85 -0.7 522,744 - PFLU_RS02280 0.85 +1.1 522,744 - PFLU_RS02280 0.85 +1.0 522,904 - +1.0 522,904 - -0.2 522,904 - +0.9 522,921 + +0.9 522,922 - +0.2 522,922 - +1.1 522,922 - -0.3 522,931 + +1.2 522,931 + +0.7 522,976 + -0.6 522,976 + +0.0 522,977 - +0.3 522,987 + -0.0 522,988 - +0.9 523,060 + -1.0 523,060 + -2.3 523,060 + +0.8 523,060 + +0.7 523,060 + +0.9 523,060 + -0.1 523,060 + -0.3 523,060 + +0.3 523,060 + +0.9 523,060 + +1.5 523,061 - +1.1 523,061 - +1.2 523,061 - +1.8 523,061 - +1.0 523,061 - +1.6 523,061 - +0.0 523,061 - +1.2 523,061 - -1.5 523,061 - +0.7 523,062 + +0.0 523,062 + +2.0 523,062 + +0.8 523,063 - +0.3 523,194 + -1.4 523,194 + +0.5 523,194 + +0.4 523,194 + -0.8 523,194 + +0.4 523,195 - +0.6 523,195 - +1.8 523,195 - +0.6 523,198 - +0.3 523,198 - +0.0 523,198 - -0.1 523,198 - +0.8 523,212 + +0.2 523,212 + +1.1 523,212 + +0.8 523,212 + -0.1 523,212 + +1.2 523,213 - +0.4 523,213 - +1.3 523,240 + -1.8 523,240 + +1.2 523,240 + +0.9 523,240 + -0.3 523,240 + +1.0 523,240 + -0.5 523,240 + +0.1 523,248 + +0.4
Or see this region's nucleotide sequence