Strain Fitness in Pseudomonas sp. S08-1 around OH686_21030

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_21020 and OH686_21025 are separated by 256 nucleotidesOH686_21025 and OH686_21030 are separated by 12 nucleotidesOH686_21030 and OH686_21035 are separated by 121 nucleotides OH686_21020: OH686_21020 - hypothetical protein, at 4,301,367 to 4,302,377 _21020 OH686_21025: OH686_21025 - hypothetical protein, at 4,302,634 to 4,303,131 _21025 OH686_21030: OH686_21030 - Cell division protein BolA, at 4,303,144 to 4,303,449 _21030 OH686_21035: OH686_21035 - Rhodanese domain protein UPF0176, at 4,303,571 to 4,304,509 _21035 Position (kb) 4303 4304Strain fitness (log2 ratio) -2 -1 0 1 2at 4302.148 kb on + strand, within OH686_21020at 4302.148 kb on + strand, within OH686_21020at 4302.149 kb on - strand, within OH686_21020at 4302.149 kb on - strand, within OH686_21020at 4302.169 kb on + strand, within OH686_21020at 4302.170 kb on - strand, within OH686_21020at 4302.513 kb on - strandat 4302.629 kb on + strandat 4302.629 kb on + strandat 4302.703 kb on - strand, within OH686_21025at 4302.741 kb on - strand, within OH686_21025at 4302.854 kb on - strand, within OH686_21025at 4302.928 kb on + strand, within OH686_21025at 4302.928 kb on + strand, within OH686_21025at 4302.928 kb on + strand, within OH686_21025at 4302.929 kb on - strand, within OH686_21025at 4302.929 kb on - strand, within OH686_21025at 4302.929 kb on - strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.976 kb on + strand, within OH686_21025at 4302.977 kb on - strand, within OH686_21025at 4302.977 kb on - strand, within OH686_21025at 4302.977 kb on - strand, within OH686_21025at 4302.977 kb on - strand, within OH686_21025at 4303.129 kb on + strandat 4303.129 kb on + strandat 4303.129 kb on + strandat 4303.130 kb on - strandat 4303.144 kb on - strandat 4303.144 kb on - strandat 4303.221 kb on + strand, within OH686_21030at 4303.221 kb on + strand, within OH686_21030at 4303.221 kb on + strand, within OH686_21030at 4303.221 kb on + strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.222 kb on - strand, within OH686_21030at 4303.249 kb on + strand, within OH686_21030at 4303.249 kb on + strand, within OH686_21030at 4303.249 kb on + strand, within OH686_21030at 4303.249 kb on + strand, within OH686_21030at 4303.250 kb on - strand, within OH686_21030at 4303.250 kb on - strand, within OH686_21030at 4303.250 kb on - strand, within OH686_21030at 4303.250 kb on - strand, within OH686_21030at 4303.250 kb on - strand, within OH686_21030at 4303.250 kb on - strand, within OH686_21030at 4303.315 kb on + strand, within OH686_21030at 4303.316 kb on - strand, within OH686_21030at 4303.316 kb on - strand, within OH686_21030at 4303.316 kb on - strand, within OH686_21030at 4303.316 kb on - strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.369 kb on + strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.370 kb on - strand, within OH686_21030at 4303.484 kb on + strandat 4303.485 kb on - strandat 4303.485 kb on - strandat 4303.601 kb on + strandat 4303.601 kb on + strandat 4303.601 kb on + strandat 4303.601 kb on + strandat 4303.601 kb on + strandat 4303.601 kb on + strandat 4303.601 kb on + strandat 4303.602 kb on - strandat 4303.602 kb on - strandat 4303.602 kb on - strandat 4303.602 kb on - strandat 4303.602 kb on - strandat 4303.602 kb on - strandat 4303.602 kb on - strandat 4303.625 kb on + strandat 4303.626 kb on - strandat 4303.806 kb on - strand, within OH686_21035at 4303.826 kb on + strand, within OH686_21035at 4303.826 kb on + strand, within OH686_21035at 4303.826 kb on + strand, within OH686_21035at 4303.826 kb on + strand, within OH686_21035at 4303.827 kb on - strand, within OH686_21035at 4303.827 kb on - strand, within OH686_21035at 4303.827 kb on - strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.907 kb on + strand, within OH686_21035at 4303.908 kb on + strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.908 kb on - strand, within OH686_21035at 4303.979 kb on + strand, within OH686_21035at 4303.979 kb on + strand, within OH686_21035at 4303.980 kb on - strand, within OH686_21035at 4304.051 kb on + strand, within OH686_21035at 4304.051 kb on + strand, within OH686_21035at 4304.052 kb on - strand, within OH686_21035at 4304.052 kb on - strand, within OH686_21035at 4304.052 kb on - strand, within OH686_21035at 4304.052 kb on - strand, within OH686_21035at 4304.066 kb on + strand, within OH686_21035at 4304.067 kb on - strand, within OH686_21035at 4304.067 kb on - strand, within OH686_21035at 4304.067 kb on - strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.138 kb on + strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.139 kb on - strand, within OH686_21035at 4304.195 kb on + strand, within OH686_21035at 4304.195 kb on + strand, within OH686_21035at 4304.195 kb on + strand, within OH686_21035at 4304.195 kb on + strand, within OH686_21035at 4304.196 kb on - strand, within OH686_21035at 4304.196 kb on - strand, within OH686_21035at 4304.294 kb on + strand, within OH686_21035at 4304.294 kb on + strand, within OH686_21035at 4304.294 kb on + strand, within OH686_21035at 4304.294 kb on + strand, within OH686_21035at 4304.295 kb on - strand, within OH686_21035at 4304.355 kb on - strand, within OH686_21035

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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4,302,148 + OH686_21020 0.77 -1.6
4,302,148 + OH686_21020 0.77 +0.5
4,302,149 - OH686_21020 0.77 -0.5
4,302,149 - OH686_21020 0.77 -1.4
4,302,169 + OH686_21020 0.79 +0.7
4,302,170 - OH686_21020 0.79 -0.2
4,302,513 - -0.2
4,302,629 + -0.5
4,302,629 + +0.4
4,302,703 - OH686_21025 0.14 +1.4
4,302,741 - OH686_21025 0.21 -1.7
4,302,854 - OH686_21025 0.44 +0.1
4,302,928 + OH686_21025 0.59 +0.3
4,302,928 + OH686_21025 0.59 +0.8
4,302,928 + OH686_21025 0.59 -0.7
4,302,929 - OH686_21025 0.59 +0.7
4,302,929 - OH686_21025 0.59 +0.6
4,302,929 - OH686_21025 0.59 -0.1
4,302,976 + OH686_21025 0.69 -0.8
4,302,976 + OH686_21025 0.69 +0.7
4,302,976 + OH686_21025 0.69 +0.5
4,302,976 + OH686_21025 0.69 +0.4
4,302,976 + OH686_21025 0.69 -0.0
4,302,976 + OH686_21025 0.69 +0.0
4,302,976 + OH686_21025 0.69 -0.6
4,302,976 + OH686_21025 0.69 -0.4
4,302,976 + OH686_21025 0.69 -0.0
4,302,976 + OH686_21025 0.69 +0.9
4,302,976 + OH686_21025 0.69 -0.0
4,302,977 - OH686_21025 0.69 -0.4
4,302,977 - OH686_21025 0.69 +0.2
4,302,977 - OH686_21025 0.69 +0.2
4,302,977 - OH686_21025 0.69 -0.9
4,303,129 + +0.9
4,303,129 + -0.4
4,303,129 + -0.5
4,303,130 - +0.6
4,303,144 - +0.4
4,303,144 - -1.4
4,303,221 + OH686_21030 0.25 -1.1
4,303,221 + OH686_21030 0.25 -0.2
4,303,221 + OH686_21030 0.25 -0.4
4,303,221 + OH686_21030 0.25 -0.0
4,303,222 - OH686_21030 0.25 +0.1
4,303,222 - OH686_21030 0.25 -1.6
4,303,222 - OH686_21030 0.25 +0.1
4,303,222 - OH686_21030 0.25 +0.2
4,303,222 - OH686_21030 0.25 +0.2
4,303,222 - OH686_21030 0.25 -0.5
4,303,222 - OH686_21030 0.25 +1.0
4,303,222 - OH686_21030 0.25 -0.2
4,303,222 - OH686_21030 0.25 +0.1
4,303,249 + OH686_21030 0.34 +0.2
4,303,249 + OH686_21030 0.34 -0.8
4,303,249 + OH686_21030 0.34 -0.4
4,303,249 + OH686_21030 0.34 +0.3
4,303,250 - OH686_21030 0.35 -0.4
4,303,250 - OH686_21030 0.35 +0.3
4,303,250 - OH686_21030 0.35 +0.1
4,303,250 - OH686_21030 0.35 +1.8
4,303,250 - OH686_21030 0.35 -0.5
4,303,250 - OH686_21030 0.35 +0.9
4,303,315 + OH686_21030 0.56 +1.3
4,303,316 - OH686_21030 0.56 -0.2
4,303,316 - OH686_21030 0.56 -0.1
4,303,316 - OH686_21030 0.56 +0.8
4,303,316 - OH686_21030 0.56 -1.0
4,303,369 + OH686_21030 0.74 -1.0
4,303,369 + OH686_21030 0.74 +0.2
4,303,369 + OH686_21030 0.74 +0.9
4,303,369 + OH686_21030 0.74 +1.3
4,303,369 + OH686_21030 0.74 +0.3
4,303,369 + OH686_21030 0.74 -0.6
4,303,369 + OH686_21030 0.74 +0.1
4,303,369 + OH686_21030 0.74 +0.3
4,303,370 - OH686_21030 0.74 -0.1
4,303,370 - OH686_21030 0.74 -0.7
4,303,370 - OH686_21030 0.74 -0.9
4,303,370 - OH686_21030 0.74 +0.0
4,303,370 - OH686_21030 0.74 -0.4
4,303,370 - OH686_21030 0.74 -0.7
4,303,370 - OH686_21030 0.74 +0.5
4,303,370 - OH686_21030 0.74 +0.2
4,303,370 - OH686_21030 0.74 -0.2
4,303,370 - OH686_21030 0.74 +0.1
4,303,370 - OH686_21030 0.74 +0.8
4,303,370 - OH686_21030 0.74 -0.5
4,303,370 - OH686_21030 0.74 -0.4
4,303,370 - OH686_21030 0.74 -0.1
4,303,370 - OH686_21030 0.74 -1.3
4,303,370 - OH686_21030 0.74 -0.4
4,303,484 + -0.8
4,303,485 - -0.2
4,303,485 - -0.7
4,303,601 + +1.0
4,303,601 + -0.0
4,303,601 + -0.3
4,303,601 + -1.3
4,303,601 + +0.0
4,303,601 + +0.2
4,303,601 + +0.4
4,303,602 - +0.7
4,303,602 - +0.6
4,303,602 - -0.3
4,303,602 - +0.8
4,303,602 - -1.1
4,303,602 - +0.4
4,303,602 - -0.2
4,303,625 + +0.5
4,303,626 - +0.0
4,303,806 - OH686_21035 0.25 -1.1
4,303,826 + OH686_21035 0.27 +0.8
4,303,826 + OH686_21035 0.27 -0.1
4,303,826 + OH686_21035 0.27 -0.6
4,303,826 + OH686_21035 0.27 -0.6
4,303,827 - OH686_21035 0.27 -0.5
4,303,827 - OH686_21035 0.27 -0.3
4,303,827 - OH686_21035 0.27 -0.2
4,303,907 + OH686_21035 0.36 -0.4
4,303,907 + OH686_21035 0.36 -0.5
4,303,907 + OH686_21035 0.36 -0.6
4,303,907 + OH686_21035 0.36 +0.0
4,303,907 + OH686_21035 0.36 -0.5
4,303,907 + OH686_21035 0.36 -1.7
4,303,907 + OH686_21035 0.36 +1.8
4,303,907 + OH686_21035 0.36 -1.2
4,303,907 + OH686_21035 0.36 -0.4
4,303,907 + OH686_21035 0.36 -0.4
4,303,907 + OH686_21035 0.36 +0.6
4,303,907 + OH686_21035 0.36 +0.0
4,303,908 + OH686_21035 0.36 -0.1
4,303,908 - OH686_21035 0.36 -0.2
4,303,908 - OH686_21035 0.36 +1.5
4,303,908 - OH686_21035 0.36 +0.8
4,303,908 - OH686_21035 0.36 -0.6
4,303,908 - OH686_21035 0.36 +0.7
4,303,908 - OH686_21035 0.36 -0.9
4,303,908 - OH686_21035 0.36 +0.6
4,303,908 - OH686_21035 0.36 -0.4
4,303,908 - OH686_21035 0.36 -0.8
4,303,908 - OH686_21035 0.36 +0.4
4,303,908 - OH686_21035 0.36 -1.9
4,303,908 - OH686_21035 0.36 +0.8
4,303,979 + OH686_21035 0.43 +0.6
4,303,979 + OH686_21035 0.43 -1.0
4,303,980 - OH686_21035 0.44 -2.0
4,304,051 + OH686_21035 0.51 -1.4
4,304,051 + OH686_21035 0.51 -1.1
4,304,052 - OH686_21035 0.51 +0.6
4,304,052 - OH686_21035 0.51 -0.6
4,304,052 - OH686_21035 0.51 +0.2
4,304,052 - OH686_21035 0.51 +0.2
4,304,066 + OH686_21035 0.53 -0.9
4,304,067 - OH686_21035 0.53 +0.5
4,304,067 - OH686_21035 0.53 -2.1
4,304,067 - OH686_21035 0.53 +0.8
4,304,138 + OH686_21035 0.60 +0.4
4,304,138 + OH686_21035 0.60 -2.1
4,304,138 + OH686_21035 0.60 -0.6
4,304,138 + OH686_21035 0.60 -0.9
4,304,138 + OH686_21035 0.60 +0.2
4,304,138 + OH686_21035 0.60 -0.7
4,304,138 + OH686_21035 0.60 -0.6
4,304,139 - OH686_21035 0.60 -1.0
4,304,139 - OH686_21035 0.60 -0.1
4,304,139 - OH686_21035 0.60 +0.2
4,304,139 - OH686_21035 0.60 +0.8
4,304,139 - OH686_21035 0.60 -0.1
4,304,139 - OH686_21035 0.60 -2.0
4,304,139 - OH686_21035 0.60 -0.8
4,304,139 - OH686_21035 0.60 +0.5
4,304,139 - OH686_21035 0.60 +0.7
4,304,139 - OH686_21035 0.60 -1.1
4,304,139 - OH686_21035 0.60 +0.3
4,304,139 - OH686_21035 0.60 +0.0
4,304,139 - OH686_21035 0.60 +0.7
4,304,195 + OH686_21035 0.66 +1.3
4,304,195 + OH686_21035 0.66 +2.0
4,304,195 + OH686_21035 0.66 -0.2
4,304,195 + OH686_21035 0.66 -0.1
4,304,196 - OH686_21035 0.67 -0.6
4,304,196 - OH686_21035 0.67 -0.7
4,304,294 + OH686_21035 0.77 +0.6
4,304,294 + OH686_21035 0.77 -0.5
4,304,294 + OH686_21035 0.77 -0.6
4,304,294 + OH686_21035 0.77 -0.6
4,304,295 - OH686_21035 0.77 +0.3
4,304,355 - OH686_21035 0.83 -0.2

Or see this region's nucleotide sequence