Strain Fitness in Pseudomonas sp. S08-1 around OH686_14470

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_14465 and OH686_14470 overlap by 4 nucleotidesOH686_14470 and OH686_14475 are separated by 7 nucleotides OH686_14465: OH686_14465 - Chemotaxis protein methyltransferase CheR , at 3,024,975 to 3,026,231 _14465 OH686_14470: OH686_14470 - CheW domain protein WspB, at 3,026,228 to 3,026,734 _14470 OH686_14475: OH686_14475 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 3,026,742 to 3,028,364 _14475 Position (kb) 3026 3027Strain fitness (log2 ratio) -2 -1 0 1 2at 3025.268 kb on + strand, within OH686_14465at 3025.268 kb on + strand, within OH686_14465at 3025.268 kb on + strand, within OH686_14465at 3025.268 kb on + strand, within OH686_14465at 3025.268 kb on + strand, within OH686_14465at 3025.268 kb on + strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.269 kb on - strand, within OH686_14465at 3025.299 kb on - strand, within OH686_14465at 3025.468 kb on - strand, within OH686_14465at 3025.468 kb on - strand, within OH686_14465at 3025.597 kb on + strand, within OH686_14465at 3025.597 kb on + strand, within OH686_14465at 3025.598 kb on - strand, within OH686_14465at 3025.598 kb on - strand, within OH686_14465at 3025.598 kb on - strand, within OH686_14465at 3025.598 kb on - strand, within OH686_14465at 3025.598 kb on - strand, within OH686_14465at 3025.598 kb on - strand, within OH686_14465at 3025.630 kb on + strand, within OH686_14465at 3025.630 kb on + strand, within OH686_14465at 3025.717 kb on + strand, within OH686_14465at 3025.717 kb on + strand, within OH686_14465at 3025.718 kb on - strand, within OH686_14465at 3025.790 kb on - strand, within OH686_14465at 3025.790 kb on - strand, within OH686_14465at 3025.897 kb on + strand, within OH686_14465at 3025.897 kb on + strand, within OH686_14465at 3025.897 kb on + strand, within OH686_14465at 3025.897 kb on + strand, within OH686_14465at 3025.897 kb on + strand, within OH686_14465at 3025.898 kb on - strand, within OH686_14465at 3025.898 kb on - strand, within OH686_14465at 3025.898 kb on - strand, within OH686_14465at 3026.037 kb on + strand, within OH686_14465at 3026.038 kb on - strand, within OH686_14465at 3026.038 kb on - strand, within OH686_14465at 3026.038 kb on - strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.049 kb on + strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.050 kb on - strand, within OH686_14465at 3026.095 kb on + strand, within OH686_14465at 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.189 kb on + strandat 3026.190 kb on - strandat 3026.190 kb on - strandat 3026.190 kb on - strandat 3026.190 kb on - strandat 3026.190 kb on - strandat 3026.325 kb on + strand, within OH686_14470at 3026.325 kb on + strand, within OH686_14470at 3026.325 kb on + strand, within OH686_14470at 3026.326 kb on - strand, within OH686_14470at 3026.326 kb on - strand, within OH686_14470at 3026.326 kb on - strand, within OH686_14470at 3026.340 kb on + strand, within OH686_14470at 3026.340 kb on + strand, within OH686_14470at 3026.340 kb on + strand, within OH686_14470at 3026.340 kb on + strand, within OH686_14470at 3026.341 kb on - strand, within OH686_14470at 3026.341 kb on - strand, within OH686_14470at 3026.463 kb on + strand, within OH686_14470at 3026.464 kb on - strand, within OH686_14470at 3026.464 kb on - strand, within OH686_14470at 3026.485 kb on + strand, within OH686_14470at 3026.486 kb on - strand, within OH686_14470at 3026.547 kb on - strand, within OH686_14470at 3026.655 kb on + strand, within OH686_14470at 3026.656 kb on - strand, within OH686_14470at 3026.656 kb on - strand, within OH686_14470at 3026.862 kb on + strandat 3026.862 kb on + strandat 3026.862 kb on + strandat 3026.862 kb on + strandat 3026.863 kb on - strandat 3026.863 kb on - strandat 3026.863 kb on - strandat 3026.863 kb on - strandat 3026.863 kb on - strandat 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.094 kb on + strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.095 kb on - strand, within OH686_14475at 3027.163 kb on + strand, within OH686_14475at 3027.164 kb on - strand, within OH686_14475at 3027.164 kb on - strand, within OH686_14475at 3027.465 kb on + strand, within OH686_14475at 3027.465 kb on + strand, within OH686_14475at 3027.465 kb on + strand, within OH686_14475at 3027.465 kb on + strand, within OH686_14475at 3027.466 kb on - strand, within OH686_14475at 3027.466 kb on - strand, within OH686_14475at 3027.466 kb on - strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.545 kb on + strand, within OH686_14475at 3027.546 kb on - strand, within OH686_14475at 3027.546 kb on - strand, within OH686_14475

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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3,025,268 + OH686_14465 0.23 +0.0
3,025,268 + OH686_14465 0.23 -0.8
3,025,268 + OH686_14465 0.23 +0.2
3,025,268 + OH686_14465 0.23 +0.7
3,025,268 + OH686_14465 0.23 -2.6
3,025,268 + OH686_14465 0.23 +0.1
3,025,269 - OH686_14465 0.23 -0.3
3,025,269 - OH686_14465 0.23 +0.5
3,025,269 - OH686_14465 0.23 +0.3
3,025,269 - OH686_14465 0.23 +0.4
3,025,269 - OH686_14465 0.23 +1.0
3,025,269 - OH686_14465 0.23 -0.3
3,025,269 - OH686_14465 0.23 -0.6
3,025,269 - OH686_14465 0.23 +0.4
3,025,299 - OH686_14465 0.26 -0.8
3,025,468 - OH686_14465 0.39 -0.4
3,025,468 - OH686_14465 0.39 -0.7
3,025,597 + OH686_14465 0.49 -0.3
3,025,597 + OH686_14465 0.49 +0.7
3,025,598 - OH686_14465 0.50 +0.0
3,025,598 - OH686_14465 0.50 -0.0
3,025,598 - OH686_14465 0.50 -0.3
3,025,598 - OH686_14465 0.50 -0.4
3,025,598 - OH686_14465 0.50 -0.8
3,025,598 - OH686_14465 0.50 +0.4
3,025,630 + OH686_14465 0.52 +0.2
3,025,630 + OH686_14465 0.52 -0.8
3,025,717 + OH686_14465 0.59 -0.1
3,025,717 + OH686_14465 0.59 -0.2
3,025,718 - OH686_14465 0.59 -0.6
3,025,790 - OH686_14465 0.65 +0.0
3,025,790 - OH686_14465 0.65 +0.5
3,025,897 + OH686_14465 0.73 -0.9
3,025,897 + OH686_14465 0.73 +0.2
3,025,897 + OH686_14465 0.73 -0.1
3,025,897 + OH686_14465 0.73 -1.3
3,025,897 + OH686_14465 0.73 +0.4
3,025,898 - OH686_14465 0.73 +0.2
3,025,898 - OH686_14465 0.73 +0.1
3,025,898 - OH686_14465 0.73 -1.4
3,026,037 + OH686_14465 0.84 -1.0
3,026,038 - OH686_14465 0.85 -0.6
3,026,038 - OH686_14465 0.85 -0.7
3,026,038 - OH686_14465 0.85 +0.3
3,026,049 + OH686_14465 0.85 -0.1
3,026,049 + OH686_14465 0.85 +0.4
3,026,049 + OH686_14465 0.85 +0.1
3,026,049 + OH686_14465 0.85 -0.4
3,026,049 + OH686_14465 0.85 +0.7
3,026,049 + OH686_14465 0.85 +1.0
3,026,049 + OH686_14465 0.85 -0.4
3,026,049 + OH686_14465 0.85 -1.0
3,026,049 + OH686_14465 0.85 -0.6
3,026,049 + OH686_14465 0.85 -0.8
3,026,049 + OH686_14465 0.85 -0.2
3,026,049 + OH686_14465 0.85 -0.8
3,026,049 + OH686_14465 0.85 -0.6
3,026,049 + OH686_14465 0.85 -0.9
3,026,050 - OH686_14465 0.86 -0.1
3,026,050 - OH686_14465 0.86 +0.3
3,026,050 - OH686_14465 0.86 -0.5
3,026,050 - OH686_14465 0.86 +0.2
3,026,050 - OH686_14465 0.86 -0.5
3,026,050 - OH686_14465 0.86 -1.2
3,026,050 - OH686_14465 0.86 +0.4
3,026,050 - OH686_14465 0.86 -0.1
3,026,050 - OH686_14465 0.86 -0.4
3,026,050 - OH686_14465 0.86 +0.3
3,026,050 - OH686_14465 0.86 -0.0
3,026,050 - OH686_14465 0.86 -0.4
3,026,050 - OH686_14465 0.86 -0.7
3,026,050 - OH686_14465 0.86 -1.1
3,026,050 - OH686_14465 0.86 +0.2
3,026,050 - OH686_14465 0.86 -0.9
3,026,050 - OH686_14465 0.86 +0.1
3,026,050 - OH686_14465 0.86 -0.1
3,026,050 - OH686_14465 0.86 +0.5
3,026,050 - OH686_14465 0.86 -0.1
3,026,050 - OH686_14465 0.86 +0.2
3,026,050 - OH686_14465 0.86 +0.1
3,026,050 - OH686_14465 0.86 -0.3
3,026,050 - OH686_14465 0.86 -0.0
3,026,050 - OH686_14465 0.86 -0.0
3,026,050 - OH686_14465 0.86 +1.0
3,026,095 + OH686_14465 0.89 +0.2
3,026,189 + +0.2
3,026,189 + +0.3
3,026,189 + +0.5
3,026,189 + -0.7
3,026,189 + +0.6
3,026,189 + -0.1
3,026,189 + -1.1
3,026,189 + +0.4
3,026,189 + +0.3
3,026,190 - +0.5
3,026,190 - -0.3
3,026,190 - -0.4
3,026,190 - +0.0
3,026,190 - -0.4
3,026,325 + OH686_14470 0.19 +0.2
3,026,325 + OH686_14470 0.19 +0.1
3,026,325 + OH686_14470 0.19 -0.7
3,026,326 - OH686_14470 0.19 -1.1
3,026,326 - OH686_14470 0.19 +0.7
3,026,326 - OH686_14470 0.19 -1.6
3,026,340 + OH686_14470 0.22 -0.3
3,026,340 + OH686_14470 0.22 +0.0
3,026,340 + OH686_14470 0.22 -0.6
3,026,340 + OH686_14470 0.22 +0.6
3,026,341 - OH686_14470 0.22 -0.6
3,026,341 - OH686_14470 0.22 -0.3
3,026,463 + OH686_14470 0.46 -0.4
3,026,464 - OH686_14470 0.47 +0.4
3,026,464 - OH686_14470 0.47 -0.7
3,026,485 + OH686_14470 0.51 +0.4
3,026,486 - OH686_14470 0.51 +0.6
3,026,547 - OH686_14470 0.63 -0.3
3,026,655 + OH686_14470 0.84 +0.8
3,026,656 - OH686_14470 0.84 +1.0
3,026,656 - OH686_14470 0.84 +0.2
3,026,862 + -0.0
3,026,862 + -0.4
3,026,862 + -0.1
3,026,862 + +1.0
3,026,863 - -0.8
3,026,863 - -0.7
3,026,863 - +0.2
3,026,863 - +0.8
3,026,863 - -0.4
3,027,094 + OH686_14475 0.22 +0.9
3,027,094 + OH686_14475 0.22 -0.6
3,027,094 + OH686_14475 0.22 +0.5
3,027,094 + OH686_14475 0.22 -0.6
3,027,094 + OH686_14475 0.22 +0.2
3,027,094 + OH686_14475 0.22 +0.0
3,027,094 + OH686_14475 0.22 +0.2
3,027,094 + OH686_14475 0.22 +0.1
3,027,094 + OH686_14475 0.22 -0.7
3,027,094 + OH686_14475 0.22 -0.8
3,027,094 + OH686_14475 0.22 +0.6
3,027,095 - OH686_14475 0.22 -0.3
3,027,095 - OH686_14475 0.22 +0.7
3,027,095 - OH686_14475 0.22 +2.1
3,027,095 - OH686_14475 0.22 +0.7
3,027,095 - OH686_14475 0.22 +0.4
3,027,095 - OH686_14475 0.22 +1.3
3,027,095 - OH686_14475 0.22 -0.4
3,027,095 - OH686_14475 0.22 +0.2
3,027,095 - OH686_14475 0.22 -0.4
3,027,095 - OH686_14475 0.22 +0.0
3,027,095 - OH686_14475 0.22 +0.3
3,027,095 - OH686_14475 0.22 -0.8
3,027,095 - OH686_14475 0.22 +0.2
3,027,095 - OH686_14475 0.22 +0.6
3,027,095 - OH686_14475 0.22 -0.5
3,027,163 + OH686_14475 0.26 +0.2
3,027,164 - OH686_14475 0.26 +0.3
3,027,164 - OH686_14475 0.26 -0.4
3,027,465 + OH686_14475 0.45 +1.1
3,027,465 + OH686_14475 0.45 -0.3
3,027,465 + OH686_14475 0.45 +0.5
3,027,465 + OH686_14475 0.45 +0.3
3,027,466 - OH686_14475 0.45 +0.7
3,027,466 - OH686_14475 0.45 +0.2
3,027,466 - OH686_14475 0.45 +0.6
3,027,545 + OH686_14475 0.49 -0.3
3,027,545 + OH686_14475 0.49 -0.1
3,027,545 + OH686_14475 0.49 -0.7
3,027,545 + OH686_14475 0.49 +0.9
3,027,545 + OH686_14475 0.49 -2.3
3,027,545 + OH686_14475 0.49 +0.7
3,027,545 + OH686_14475 0.49 +0.7
3,027,546 - OH686_14475 0.50 -0.1
3,027,546 - OH686_14475 0.50 +1.4

Or see this region's nucleotide sequence