Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_00115 and OH686_00120 are separated by 10 nucleotides OH686_00120 and OH686_00125 are separated by 13 nucleotides OH686_00125 and OH686_00130 overlap by 4 nucleotides
OH686_00115: OH686_00115 - NADH-ubiquinone oxidoreductase chain J , at 23,323 to 23,832
_00115
OH686_00120: OH686_00120 - NADH-ubiquinone oxidoreductase chain I , at 23,843 to 24,391
_00120
OH686_00125: OH686_00125 - NADH-ubiquinone oxidoreductase chain H , at 24,405 to 25,397
_00125
OH686_00130: OH686_00130 - NADH dehydrogenase (quinone), G subunit, at 25,394 to 28,102
_00130
Position (kb) 24
25
26 Strain fitness (log2 ratio) -2
-1
0
1 at 23.410 kb on + strand, within OH686_00115 at 23.420 kb on + strand, within OH686_00115 at 23.421 kb on - strand, within OH686_00115 at 23.421 kb on - strand, within OH686_00115 at 23.508 kb on - strand, within OH686_00115 at 23.658 kb on - strand, within OH686_00115 at 23.787 kb on + strand at 23.787 kb on + strand at 23.787 kb on + strand at 23.787 kb on + strand at 23.788 kb on - strand at 23.788 kb on - strand at 23.788 kb on - strand at 23.788 kb on - strand at 23.816 kb on + strand at 23.817 kb on - strand at 23.817 kb on - strand at 23.844 kb on + strand at 23.934 kb on + strand, within OH686_00120 at 23.935 kb on - strand, within OH686_00120 at 23.935 kb on - strand, within OH686_00120 at 23.944 kb on - strand, within OH686_00120 at 23.944 kb on - strand, within OH686_00120 at 23.991 kb on + strand, within OH686_00120 at 23.992 kb on - strand, within OH686_00120 at 23.992 kb on - strand, within OH686_00120 at 23.992 kb on - strand, within OH686_00120 at 23.992 kb on - strand, within OH686_00120 at 24.012 kb on + strand, within OH686_00120 at 24.012 kb on + strand, within OH686_00120 at 24.013 kb on - strand, within OH686_00120 at 24.377 kb on + strand at 24.377 kb on + strand at 24.377 kb on + strand at 24.378 kb on - strand at 24.378 kb on - strand at 24.378 kb on - strand at 24.378 kb on - strand at 24.378 kb on - strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.382 kb on - strand at 24.382 kb on - strand at 24.382 kb on - strand at 24.382 kb on - strand at 24.382 kb on - strand at 24.406 kb on + strand at 24.407 kb on - strand at 24.660 kb on + strand, within OH686_00125 at 24.660 kb on + strand, within OH686_00125 at 24.660 kb on + strand, within OH686_00125 at 24.661 kb on - strand, within OH686_00125 at 24.671 kb on - strand, within OH686_00125 at 24.671 kb on - strand, within OH686_00125 at 24.709 kb on + strand, within OH686_00125 at 24.710 kb on - strand, within OH686_00125 at 24.803 kb on + strand, within OH686_00125 at 24.803 kb on + strand, within OH686_00125 at 24.803 kb on + strand, within OH686_00125 at 24.803 kb on + strand, within OH686_00125 at 24.804 kb on - strand, within OH686_00125 at 24.853 kb on + strand, within OH686_00125 at 24.931 kb on + strand, within OH686_00125 at 24.932 kb on - strand, within OH686_00125 at 25.016 kb on - strand, within OH686_00125 at 25.606 kb on - strand at 25.606 kb on - strand at 25.606 kb on - strand at 25.896 kb on + strand, within OH686_00130 at 25.982 kb on - strand, within OH686_00130 at 25.993 kb on - strand, within OH686_00130 at 26.073 kb on - strand, within OH686_00130 at 26.073 kb on - strand, within OH686_00130 at 26.202 kb on + strand, within OH686_00130 at 26.202 kb on + strand, within OH686_00130 at 26.202 kb on + strand, within OH686_00130 at 26.203 kb on - strand, within OH686_00130 at 26.205 kb on + strand, within OH686_00130 at 26.205 kb on + strand, within OH686_00130
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 23,410 + OH686_00115 0.17 -0.8 23,420 + OH686_00115 0.19 -0.2 23,421 - OH686_00115 0.19 -1.7 23,421 - OH686_00115 0.19 -1.2 23,508 - OH686_00115 0.36 +0.8 23,658 - OH686_00115 0.66 -0.8 23,787 + -0.5 23,787 + -0.2 23,787 + -0.8 23,787 + -0.5 23,788 - -1.0 23,788 - -0.2 23,788 - -0.5 23,788 - +0.5 23,816 + -0.0 23,817 - -0.5 23,817 - -0.5 23,844 + +0.6 23,934 + OH686_00120 0.17 -0.8 23,935 - OH686_00120 0.17 -0.8 23,935 - OH686_00120 0.17 -1.2 23,944 - OH686_00120 0.18 -0.5 23,944 - OH686_00120 0.18 -1.5 23,991 + OH686_00120 0.27 -0.5 23,992 - OH686_00120 0.27 -1.7 23,992 - OH686_00120 0.27 -0.3 23,992 - OH686_00120 0.27 -1.0 23,992 - OH686_00120 0.27 -0.2 24,012 + OH686_00120 0.31 -1.8 24,012 + OH686_00120 0.31 -0.5 24,013 - OH686_00120 0.31 -0.8 24,377 + -0.0 24,377 + -1.0 24,377 + -0.7 24,378 - -0.9 24,378 - -1.7 24,378 - +0.0 24,378 - -0.8 24,378 - -0.4 24,381 + -0.8 24,381 + -0.8 24,381 + -0.8 24,381 + -0.2 24,381 + -0.2 24,381 + -0.2 24,381 + -1.0 24,381 + +0.2 24,381 + -0.8 24,381 + -0.8 24,381 + -0.8 24,382 - -0.2 24,382 - -0.2 24,382 - -0.7 24,382 - -1.5 24,382 - +0.2 24,406 + +1.6 24,407 - -2.1 24,660 + OH686_00125 0.26 -0.2 24,660 + OH686_00125 0.26 -0.2 24,660 + OH686_00125 0.26 -0.5 24,661 - OH686_00125 0.26 -0.2 24,671 - OH686_00125 0.27 -2.1 24,671 - OH686_00125 0.27 -0.2 24,709 + OH686_00125 0.31 -0.2 24,710 - OH686_00125 0.31 -1.4 24,803 + OH686_00125 0.40 +0.5 24,803 + OH686_00125 0.40 -1.4 24,803 + OH686_00125 0.40 -0.2 24,803 + OH686_00125 0.40 -0.2 24,804 - OH686_00125 0.40 -0.2 24,853 + OH686_00125 0.45 +1.0 24,931 + OH686_00125 0.53 -1.0 24,932 - OH686_00125 0.53 -0.5 25,016 - OH686_00125 0.62 -0.2 25,606 - -0.2 25,606 - +1.5 25,606 - -1.0 25,896 + OH686_00130 0.19 +0.8 25,982 - OH686_00130 0.22 -1.2 25,993 - OH686_00130 0.22 -0.8 26,073 - OH686_00130 0.25 -1.3 26,073 - OH686_00130 0.25 -0.8 26,202 + OH686_00130 0.30 -1.0 26,202 + OH686_00130 0.30 -1.0 26,202 + OH686_00130 0.30 +0.2 26,203 - OH686_00130 0.30 -0.5 26,205 + OH686_00130 0.30 +0.8 26,205 + OH686_00130 0.30 -1.0
Or see this region's nucleotide sequence