Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03625 and PS417_03630 are separated by 136 nucleotides PS417_03630 and PS417_03635 are separated by 137 nucleotides PS417_03635 and PS417_03640 overlap by 8 nucleotides
PS417_03625: PS417_03625 - lipid A 3-O-deacylase, at 823,587 to 824,105
_03625
PS417_03630: PS417_03630 - hypothetical protein, at 824,242 to 824,463
_03630
PS417_03635: PS417_03635 - membrane protein, at 824,601 to 825,080
_03635
PS417_03640: PS417_03640 - cyclopropane-fatty-acyl-phospholipid synthase, at 825,073 to 826,344
_03640
Position (kb) 824
825
826 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 823.734 kb on - strand, within PS417_03625 at 823.795 kb on - strand, within PS417_03625 at 823.795 kb on - strand, within PS417_03625 at 823.884 kb on + strand, within PS417_03625 at 823.884 kb on + strand, within PS417_03625 at 823.884 kb on + strand, within PS417_03625 at 823.885 kb on - strand, within PS417_03625 at 823.885 kb on - strand, within PS417_03625 at 823.885 kb on - strand, within PS417_03625 at 823.886 kb on + strand, within PS417_03625 at 823.886 kb on + strand, within PS417_03625 at 823.886 kb on + strand, within PS417_03625 at 824.076 kb on + strand at 824.076 kb on + strand at 824.077 kb on - strand at 824.088 kb on + strand at 824.089 kb on - strand at 824.089 kb on - strand at 824.104 kb on - strand at 824.170 kb on + strand at 824.185 kb on + strand at 824.186 kb on - strand at 824.221 kb on - strand at 824.340 kb on + strand, within PS417_03630 at 824.340 kb on + strand, within PS417_03630 at 824.341 kb on - strand, within PS417_03630 at 824.341 kb on - strand, within PS417_03630 at 824.428 kb on - strand, within PS417_03630 at 824.429 kb on + strand, within PS417_03630 at 824.560 kb on - strand at 824.560 kb on - strand at 824.575 kb on + strand at 824.576 kb on - strand at 824.625 kb on + strand at 824.625 kb on + strand at 824.911 kb on - strand, within PS417_03635 at 824.959 kb on - strand, within PS417_03635 at 825.075 kb on - strand at 825.185 kb on + strand at 825.209 kb on + strand, within PS417_03640 at 825.210 kb on - strand, within PS417_03640 at 825.210 kb on - strand, within PS417_03640 at 825.390 kb on + strand, within PS417_03640 at 825.391 kb on - strand, within PS417_03640 at 825.392 kb on + strand, within PS417_03640 at 825.393 kb on - strand, within PS417_03640 at 825.702 kb on - strand, within PS417_03640 at 825.861 kb on - strand, within PS417_03640 at 825.861 kb on - strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 826.024 kb on + strand, within PS417_03640 at 826.024 kb on + strand, within PS417_03640 at 826.024 kb on + strand, within PS417_03640 at 826.025 kb on - strand, within PS417_03640
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 823,734 - PS417_03625 0.28 -0.2 823,795 - PS417_03625 0.40 -1.0 823,795 - PS417_03625 0.40 -0.9 823,884 + PS417_03625 0.57 -0.3 823,884 + PS417_03625 0.57 -0.1 823,884 + PS417_03625 0.57 -0.0 823,885 - PS417_03625 0.57 -1.3 823,885 - PS417_03625 0.57 -0.2 823,885 - PS417_03625 0.57 -1.4 823,886 + PS417_03625 0.58 -1.2 823,886 + PS417_03625 0.58 +1.6 823,886 + PS417_03625 0.58 -1.1 824,076 + +2.3 824,076 + -0.5 824,077 - +0.1 824,088 + +0.9 824,089 - -1.0 824,089 - -0.7 824,104 - -1.2 824,170 + -0.1 824,185 + -0.4 824,186 - -3.1 824,221 - -0.3 824,340 + PS417_03630 0.44 +0.7 824,340 + PS417_03630 0.44 +0.2 824,341 - PS417_03630 0.45 -0.1 824,341 - PS417_03630 0.45 -0.3 824,428 - PS417_03630 0.84 -1.9 824,429 + PS417_03630 0.84 -0.9 824,560 - -0.6 824,560 - -0.5 824,575 + +0.0 824,576 - +0.3 824,625 + +0.1 824,625 + -0.2 824,911 - PS417_03635 0.65 +0.8 824,959 - PS417_03635 0.75 +0.6 825,075 - -0.2 825,185 + -0.6 825,209 + PS417_03640 0.11 +0.1 825,210 - PS417_03640 0.11 +0.2 825,210 - PS417_03640 0.11 +1.4 825,390 + PS417_03640 0.25 -0.3 825,391 - PS417_03640 0.25 -0.3 825,392 + PS417_03640 0.25 +0.3 825,393 - PS417_03640 0.25 +0.0 825,702 - PS417_03640 0.49 +0.9 825,861 - PS417_03640 0.62 -0.0 825,861 - PS417_03640 0.62 +0.2 825,911 + PS417_03640 0.66 +0.5 825,911 + PS417_03640 0.66 -0.1 825,911 + PS417_03640 0.66 -0.1 825,911 + PS417_03640 0.66 -0.4 826,024 + PS417_03640 0.75 +0.2 826,024 + PS417_03640 0.75 +1.9 826,024 + PS417_03640 0.75 +0.1 826,025 - PS417_03640 0.75 -0.2
Or see this region's nucleotide sequence