Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03025 and PS417_03030 are separated by 151 nucleotides PS417_03030 and PS417_03035 overlap by 8 nucleotides PS417_03035 and PS417_03040 are separated by 24 nucleotides
PS417_03025: PS417_03025 - penicillin-binding protein 1C, at 695,900 to 698,191
_03025
PS417_03030: PS417_03030 - pyrophosphatase, at 698,343 to 698,651
_03030
PS417_03035: PS417_03035 - SAM-dependent methyltransferase, at 698,644 to 699,393
_03035
PS417_03040: PS417_03040 - hypothetical protein, at 699,418 to 700,020
_03040
Position (kb) 698
699 Strain fitness (log2 ratio) -2
-1
0
1
2 at 698.394 kb on - strand, within PS417_03030 at 698.556 kb on + strand, within PS417_03030 at 698.556 kb on + strand, within PS417_03030 at 698.556 kb on + strand, within PS417_03030 at 698.557 kb on - strand, within PS417_03030 at 698.805 kb on + strand, within PS417_03035 at 698.805 kb on + strand, within PS417_03035 at 698.805 kb on + strand, within PS417_03035 at 698.806 kb on - strand, within PS417_03035 at 698.806 kb on - strand, within PS417_03035 at 698.806 kb on - strand, within PS417_03035 at 698.806 kb on - strand, within PS417_03035 at 698.806 kb on - strand, within PS417_03035 at 698.806 kb on - strand, within PS417_03035 at 698.919 kb on + strand, within PS417_03035 at 698.920 kb on - strand, within PS417_03035 at 698.965 kb on + strand, within PS417_03035 at 699.168 kb on + strand, within PS417_03035 at 699.169 kb on - strand, within PS417_03035 at 699.265 kb on + strand, within PS417_03035 at 699.265 kb on + strand, within PS417_03035 at 699.265 kb on + strand, within PS417_03035 at 699.265 kb on + strand, within PS417_03035 at 699.265 kb on + strand, within PS417_03035 at 699.266 kb on - strand, within PS417_03035 at 699.266 kb on - strand, within PS417_03035 at 699.266 kb on - strand, within PS417_03035 at 699.266 kb on - strand, within PS417_03035 at 699.267 kb on + strand, within PS417_03035 at 699.267 kb on + strand, within PS417_03035 at 699.267 kb on + strand, within PS417_03035 at 699.267 kb on + strand, within PS417_03035 at 699.268 kb on - strand, within PS417_03035 at 699.268 kb on - strand, within PS417_03035 at 699.268 kb on - strand, within PS417_03035 at 699.268 kb on - strand, within PS417_03035 at 699.365 kb on - strand at 699.368 kb on + strand at 699.392 kb on - strand at 699.571 kb on + strand, within PS417_03040 at 699.572 kb on - strand, within PS417_03040 at 699.585 kb on + strand, within PS417_03040 at 699.586 kb on - strand, within PS417_03040
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 698,394 - PS417_03030 0.17 -0.2 698,556 + PS417_03030 0.69 +0.2 698,556 + PS417_03030 0.69 +1.3 698,556 + PS417_03030 0.69 -0.2 698,557 - PS417_03030 0.69 -0.6 698,805 + PS417_03035 0.21 -0.5 698,805 + PS417_03035 0.21 +0.1 698,805 + PS417_03035 0.21 -0.9 698,806 - PS417_03035 0.22 -0.6 698,806 - PS417_03035 0.22 -0.7 698,806 - PS417_03035 0.22 -0.4 698,806 - PS417_03035 0.22 -0.0 698,806 - PS417_03035 0.22 -0.2 698,806 - PS417_03035 0.22 -0.1 698,919 + PS417_03035 0.37 +0.2 698,920 - PS417_03035 0.37 +0.1 698,965 + PS417_03035 0.43 +1.8 699,168 + PS417_03035 0.70 +0.1 699,169 - PS417_03035 0.70 +0.6 699,265 + PS417_03035 0.83 -0.3 699,265 + PS417_03035 0.83 -0.2 699,265 + PS417_03035 0.83 -0.1 699,265 + PS417_03035 0.83 +0.4 699,265 + PS417_03035 0.83 -0.7 699,266 - PS417_03035 0.83 +0.3 699,266 - PS417_03035 0.83 +0.0 699,266 - PS417_03035 0.83 -0.1 699,266 - PS417_03035 0.83 -2.4 699,267 + PS417_03035 0.83 -0.4 699,267 + PS417_03035 0.83 +0.5 699,267 + PS417_03035 0.83 -0.4 699,267 + PS417_03035 0.83 +0.1 699,268 - PS417_03035 0.83 -0.7 699,268 - PS417_03035 0.83 +0.6 699,268 - PS417_03035 0.83 +0.4 699,268 - PS417_03035 0.83 +0.0 699,365 - -0.9 699,368 + -0.3 699,392 - +1.0 699,571 + PS417_03040 0.25 -0.3 699,572 - PS417_03040 0.26 -0.3 699,585 + PS417_03040 0.28 +0.5 699,586 - PS417_03040 0.28 +0.3
Or see this region's nucleotide sequence