Strain Fitness in Pseudomonas simiae WCS417 around PS417_21555

Experiment: Benzalkonium Chloride 0.012 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.012 mg/ml
4,680,360	+		PS417_21550	0.27	+0.2
4,680,360	+		PS417_21550	0.27	-0.5
4,680,361	-		PS417_21550	0.27	+0.0
4,680,361	-		PS417_21550	0.27	+0.7
4,680,361	-		PS417_21550	0.27	-0.7
4,680,361	-		PS417_21550	0.27	-2.4
4,680,361	-		PS417_21550	0.27	+0.5
4,680,443	-		PS417_21550	0.35	-0.5
4,680,443	-		PS417_21550	0.35	+0.2
4,680,484	-		PS417_21550	0.38	-0.1
4,680,613	+		PS417_21550	0.50	+0.3
4,680,655	-		PS417_21550	0.54	+0.3
4,680,663	+		PS417_21550	0.55	+0.3
4,680,733	+		PS417_21550	0.61	+0.6
4,680,733	+		PS417_21550	0.61	-0.1
4,680,734	-		PS417_21550	0.62	-0.1
4,680,821	+		PS417_21550	0.70	+1.6
4,680,822	-		PS417_21550	0.70	+0.1
4,680,869	-		PS417_21550	0.74	-0.3
4,680,869	-		PS417_21550	0.74	+0.0
4,680,926	+		PS417_21550	0.79	+0.0
4,680,927	-		PS417_21550	0.79	-0.1
4,681,016	-		PS417_21550	0.88	-0.3
4,681,034	+		PS417_21550	0.89	+0.0
4,681,034	+		PS417_21550	0.89	+0.5
4,681,034	+		PS417_21550	0.89	+0.1
4,681,035	-				-1.5
4,681,049	-				-0.8
4,681,070	+				+2.3
4,681,071	-				-0.5
4,681,147	+				+0.3
4,681,163	+				+0.5
4,681,163	+				+0.7
4,681,179	+				+0.3
4,681,179	+				+1.5
4,681,211	-				+0.6
4,681,211	-				+0.5
4,681,243	-				-0.8
4,681,243	-				-0.2
4,681,266	-				-0.1
4,681,313	+				+0.0
4,681,313	+				+1.0
4,681,315	+				+0.0
4,681,397	+				-3.4
4,681,397	+				-3.3
4,681,398	-				-3.1
4,681,398	-				-3.3
4,681,424	-				-3.0
4,681,692	-		PS417_21555	0.28	-2.4
4,681,719	-		PS417_21555	0.30	-2.9
4,681,733	+		PS417_21555	0.31	-3.2
4,681,733	+				+0.8
4,681,986	-		PS417_21555	0.50	-1.3
4,682,057	+		PS417_21555	0.55	-2.6
4,682,057	+		PS417_21555	0.55	-3.1
4,682,058	-		PS417_21555	0.56	-2.2
4,682,058	-		PS417_21555	0.56	-3.7
4,682,073	-		PS417_21555	0.57	-2.4
4,682,092	-		PS417_21555	0.58	-0.9
4,682,167	+		PS417_21555	0.64	+0.0
4,682,167	+		PS417_21555	0.64	-3.2
4,682,167	+		PS417_21555	0.64	-3.3
4,682,262	-		PS417_21555	0.71	-2.4
4,682,301	-		PS417_21555	0.74	-2.8
4,682,339	+		PS417_21555	0.77	-3.3
4,682,340	-		PS417_21555	0.77	-3.6
4,682,340	-		PS417_21555	0.77	-2.5
4,682,340	-				-1.5
4,682,340	-		PS417_21555	0.77	-4.3
4,682,340	-		PS417_21555	0.77	-2.8
4,682,340	-		PS417_21555	0.77	-1.0
4,682,513	+				-2.1
4,682,631	+				-2.2
4,682,660	-				+0.2
4,682,673	+				-2.3
4,682,673	+				-1.4
4,682,673	+				-1.4
4,682,673	+				+0.5
4,682,674	-				+0.2
4,682,677	+				-5.1
4,682,677	+				-1.9
4,682,678	-				+0.3
4,682,847	+		PS417_21560	0.24	-2.3
4,682,847	+		PS417_21560	0.24	-3.5
4,682,847	+		PS417_21560	0.24	-3.7
4,682,847	+		PS417_21560	0.24	-2.9
4,682,847	+		PS417_21560	0.24	-2.9
4,682,848	-		PS417_21560	0.24	-1.1
4,682,848	-		PS417_21560	0.24	-1.4
4,682,848	-		PS417_21560	0.24	-2.0
4,682,848	-		PS417_21560	0.24	-1.8
4,682,896	+		PS417_21560	0.31	-3.3
4,683,377	-				-1.1
4,683,399	-				-4.8
4,683,412	+				-3.3
4,683,544	+		PS417_21565	0.29	+2.3
4,683,544	+		PS417_21565	0.29	+2.2
4,683,544	+		PS417_21565	0.29	+1.7
4,683,545	-				+2.1
4,683,545	-		PS417_21565	0.30	+2.0
4,683,550	+		PS417_21565	0.31	+2.4