Strain Fitness in Pseudomonas simiae WCS417 around PS417_08230
Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.012 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,802,276 | - | PS417_08225 | 0.43 | -1.9 | |
| 1,802,477 | - | PS417_08225 | 0.55 | -1.0 | |
| 1,802,517 | - | PS417_08225 | 0.58 | -1.6 | |
| 1,802,521 | - | PS417_08225 | 0.58 | -0.8 | |
| 1,802,910 | - | PS417_08225 | 0.80 | -1.8 | |
| 1,802,933 | - | PS417_08225 | 0.82 | -5.1 | |
| 1,802,933 | - | PS417_08225 | 0.82 | -2.7 | |
| 1,803,188 | - | -2.6 | |||
| 1,803,325 | - | -2.5 | |||
| 1,803,407 | - | PS417_08230 | 0.12 | -2.0 | |
| 1,803,436 | - | PS417_08230 | 0.14 | -1.2 | |
| 1,803,725 | - | PS417_08230 | 0.36 | -1.0 | |
| 1,804,589 | - | +2.1 | |||
| 1,804,618 | + | -0.8 | |||
| 1,804,619 | - | -1.9 | |||
| 1,804,772 | - | PS417_08235 | 0.17 | -0.2 | |
| 1,805,053 | - | PS417_08235 | 0.43 | -1.9 | |
| 1,805,195 | - | PS417_08235 | 0.56 | -0.4 | |
| 1,805,354 | - | PS417_08235 | 0.71 | -1.1 |
Or see this region's nucleotide sequence