Strain Fitness in Pseudomonas simiae WCS417 around PS417_05320

Experiment: Benzalkonium Chloride 0.012 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.012 mg/ml
1,181,606	-		PS417_05315	0.69	-0.1
1,181,617	+		PS417_05315	0.71	-0.2
1,181,618	-		PS417_05315	0.71	-0.0
1,181,618	-		PS417_05315	0.71	+0.1
1,181,626	+		PS417_05315	0.73	-0.4
1,181,626	+		PS417_05315	0.73	+0.1
1,181,627	-		PS417_05315	0.73	-0.7
1,181,863	-				-0.1
1,181,879	+				+0.2
1,181,901	+				-0.7
1,181,901	+				+0.9
1,181,902	-				+0.3
1,181,902	-				+0.3
1,181,946	+				-0.8
1,181,946	+				-0.3
1,181,947	-				-0.5
1,181,947	-				+0.3
1,181,949	-				+0.3
1,181,949	-				-0.4
1,181,949	-				+0.3
1,182,012	+				-1.6
1,182,013	-				-0.2
1,182,013	-				-0.4
1,182,041	+				-3.8
1,182,060	+				-4.7
1,182,060	+				-1.5
1,182,061	-				-0.5
1,182,108	-				-0.4
1,182,119	+				-5.0
1,182,119	+				-4.6
1,182,119	+				-6.4
1,182,318	+				-7.1
1,182,396	+				-2.3
1,182,418	+				-3.7
1,182,422	-				-0.2
1,182,465	-				-0.5
1,182,574	-		PS417_05320	0.17	-0.6
1,182,609	+		PS417_05320	0.23	-3.6
1,182,609	+		PS417_05320	0.23	-4.9
1,182,609	+		PS417_05320	0.23	-2.8
1,182,610	-		PS417_05320	0.24	-0.1
1,182,610	-		PS417_05320	0.24	-0.3
1,182,613	-		PS417_05320	0.24	+0.0
1,182,706	-		PS417_05320	0.42	+0.5
1,182,907	-		PS417_05320	0.80	-0.3
1,182,928	+		PS417_05320	0.84	-3.9
1,182,929	-		PS417_05320	0.85	+0.3
1,182,929	-		PS417_05320	0.85	-0.4
1,182,932	+		PS417_05320	0.85	-2.0
1,182,932	+		PS417_05320	0.85	-5.9
1,182,932	+		PS417_05320	0.85	-5.4
1,182,933	-		PS417_05320	0.85	-0.6
1,182,933	-		PS417_05320	0.85	-0.0
1,183,001	-				-0.2
1,183,026	+				-3.6
1,183,064	+				-4.0
1,183,064	+				-4.0
1,183,064	+				-2.7
1,183,065	-				-1.1
1,183,073	-				-0.0
1,183,116	-		PS417_05325	0.10	+1.2
1,183,263	-		PS417_05325	0.36	+1.2
1,183,448	+		PS417_05325	0.69	-3.2
1,183,448	+		PS417_05325	0.69	-6.1
1,183,449	-		PS417_05325	0.70	+0.6
1,183,611	+				+0.3
1,183,612	-				-0.5
1,183,740	+				-1.2
1,183,741	-				-0.2
1,183,743	+				-0.2
1,183,809	+				-1.3
1,183,826	-				+0.5
1,183,826	-				+0.5
1,183,857	+				-1.5
1,183,977	+		PS417_05330	0.10	-0.2
1,183,977	+		PS417_05330	0.10	-0.6
1,183,977	+		PS417_05330	0.10	+0.5
1,183,978	-		PS417_05330	0.10	-0.1
1,183,978	-		PS417_05330	0.10	-0.2
1,183,978	-		PS417_05330	0.10	-0.5
1,183,978	-		PS417_05330	0.10	-0.1
1,183,978	-		PS417_05330	0.10	+0.2