Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2915

Experiment: KB with Acriflavine 1.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 1.25 ug/ml
3,502,693	+				+0.9
3,502,694	-				-0.5
3,502,699	+				-0.2
3,502,700	-				-0.6
3,502,735	+				+0.1
3,502,736	-				+0.6
3,502,736	-				-2.2
3,502,736	-				-1.5
3,502,736	-				+0.8
3,502,804	-				-0.1
3,502,804	-				+0.2
3,502,848	+				+1.1
3,502,848	+				+0.6
3,502,848	+				-0.8
3,502,849	-				-0.3
3,502,849	-				-1.9
3,502,852	+				+1.4
3,502,853	-				-1.1
3,502,853	-				-1.2
3,502,853	-				+0.0
3,502,853	-				-1.1
3,502,853	-				+0.1
3,502,853	-				+0.4
3,502,912	-				+0.3
3,502,912	-				-2.5
3,502,949	+				+0.1
3,502,949	+				+0.1
3,502,950	-				-0.6
3,503,005	-				+0.2
3,503,060	+				-1.1
3,503,103	+				+0.6
3,503,103	+				+0.6
3,503,104	-				-1.4
3,503,104	-				-0.8
3,503,163	-				+1.2
3,503,191	+				-0.8
3,503,191	+				-0.1
3,503,192	-				-1.6
3,503,192	-				-0.1
3,503,192	-				-2.0
3,503,204	+				-0.8
3,503,205	-				-0.7
3,503,205	-				+0.7
3,503,277	+				+0.5
3,503,277	+				+0.9
3,503,278	-				-1.2
3,503,278	-				-0.9
3,503,281	+				-2.8
3,503,281	+				-0.6
3,503,281	+				-1.6
3,503,281	+				-2.2
3,503,281	+				-1.8
3,503,281	+				-0.1
3,503,281	+				-0.1
3,503,281	+				+0.2
3,503,281	+				+0.1
3,503,281	+				+0.7
3,503,281	+				-0.1
3,503,282	-				-0.1
3,503,282	-				-0.9
3,503,282	-				-0.3
3,503,282	-				-0.1
3,503,282	-				-2.9
3,503,282	-				-1.9
3,503,282	-				+0.7
3,503,392	+				+1.3
3,503,392	+				-3.1
3,503,392	+				+0.9
3,503,393	-				+0.6
3,503,393	-				+0.4
3,503,393	-				-0.5
3,503,393	-				-0.5
3,503,393	-				+1.9
3,503,393	-				-2.3
3,503,393	-				-1.4
3,503,394	+				-0.3
3,503,394	+				-2.8
3,503,394	+				+0.3
3,503,394	+				-1.6
3,503,394	+				+0.5
3,503,395	-				-1.2
3,503,395	-				-1.9
3,503,395	-				-0.9
3,503,395	-				-1.5
3,503,395	-				-1.6
3,503,395	-				-2.9
3,503,427	+				-0.5
3,503,427	+				-2.2
3,503,428	-				-1.9
3,503,428	-				-0.6
3,503,428	-				-1.1
3,503,428	-				+0.4
3,503,512	+				-0.8
3,503,512	+				+1.5
3,503,512	+				+0.5
3,503,528	-				+2.3
3,503,563	+				-1.1
3,503,563	+				-0.6
3,503,564	-				+0.3
3,503,592	-				+1.5
3,503,598	-				-1.1
3,503,617	+				-1.6
3,503,623	+				+0.1
3,503,623	+				-2.5
3,503,623	+				-0.8
3,503,623	+				-2.4
3,503,623	+				-2.1
3,503,624	-				-0.1
3,503,724	-				+0.9
3,503,753	-				-1.5
3,503,851	+		Psyr_2915	0.17	+0.8
3,504,014	-		Psyr_2915	0.34	-1.1
3,504,066	+		Psyr_2915	0.39	+1.9
3,504,066	+		Psyr_2915	0.39	+0.3
3,504,069	+		Psyr_2915	0.40	+0.2
3,504,070	-		Psyr_2915	0.40	+0.2
3,504,168	-		Psyr_2915	0.50	-1.6
3,504,168	-		Psyr_2915	0.50	+0.4
3,504,168	-		Psyr_2915	0.50	+0.0
3,504,521	-		Psyr_2915	0.86	+0.5
3,504,665	+				+0.5
3,504,797	-				+1.1
3,504,797	-				-0.8
3,504,884	+				-0.8
3,504,885	-				+0.9
3,504,929	+		Psyr_2916	0.12	+1.3
3,504,930	-		Psyr_2916	0.12	-0.4
3,504,994	+		Psyr_2916	0.18	-0.4
3,505,189	+		Psyr_2916	0.39	-0.1
3,505,189	+		Psyr_2916	0.39	+0.5
3,505,189	+		Psyr_2916	0.39	-0.1
3,505,189	+		Psyr_2916	0.39	-0.2
3,505,465	+		Psyr_2916	0.68	-0.1
3,505,465	+		Psyr_2916	0.68	-0.6
3,505,466	-		Psyr_2916	0.68	+0.0
3,505,466	-		Psyr_2916	0.68	+1.3