Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2106

Experiment: KB with Acriflavine 1.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 1.25 ug/ml
2,457,265	+		Psyr_2105	0.62	+0.3
2,457,266	-		Psyr_2105	0.62	-0.2
2,457,266	-		Psyr_2105	0.62	-0.1
2,457,269	-		Psyr_2105	0.62	+1.0
2,457,481	+		Psyr_2105	0.80	-1.4
2,457,482	-		Psyr_2105	0.80	-0.6
2,457,494	-		Psyr_2105	0.81	-0.0
2,457,800	-				-0.8
2,457,801	+				-2.4
2,457,801	+				+1.3
2,457,801	+				+1.2
2,457,801	+				+2.0
2,457,801	+				-0.4
2,457,801	+				+0.3
2,457,801	+				-0.4
2,457,801	+				-1.0
2,457,801	+				+0.1
2,457,801	+				+0.7
2,457,802	-				+0.8
2,457,802	-				-0.4
2,457,802	-				-0.6
2,457,802	-				-0.4
2,457,802	-				-0.0
2,457,803	+				-0.5
2,457,803	+				-0.1
2,457,803	+				+0.6
2,457,803	+				+1.0
2,457,803	+				+0.2
2,457,803	+				-0.7
2,457,803	+				+0.1
2,457,803	+				+0.1
2,457,803	+				-1.3
2,457,803	+				+0.4
2,457,803	+				+1.0
2,457,803	+				+1.5
2,457,803	+				+0.2
2,457,803	+				+0.1
2,457,803	+				-1.1
2,457,803	+				-0.0
2,457,803	+				+0.4
2,457,803	+				-0.2
2,457,803	+				+0.3
2,457,803	+				-0.6
2,457,803	+				+0.4
2,457,803	+				+0.8
2,457,804	-				-0.5
2,457,804	-				+1.1
2,457,804	-				-1.9
2,457,804	-				+0.1
2,457,804	-				+1.1
2,457,804	-				+1.3
2,457,804	-				-0.4
2,457,804	-				-0.0
2,457,804	-				+1.3
2,457,804	-				-0.2
2,457,804	-				-2.0
2,457,804	-				+1.1
2,457,804	-				-0.6
2,457,804	-				+0.2
2,457,804	-				+0.6
2,457,804	-				-0.3
2,457,804	-				-0.5
2,457,804	-				-0.5
2,457,804	-				+0.0
2,457,804	-				-0.6
2,457,804	-				-0.0
2,457,804	-				+1.0
2,457,922	+				-0.6
2,457,977	+				-0.4
2,457,977	+				+0.4
2,457,977	+				+0.3
2,457,977	+				+0.4
2,457,978	-				-0.3
2,457,978	-				-0.0
2,457,978	-				-0.6
2,457,978	-				+1.1
2,457,978	-				+0.4
2,457,979	+				+0.7
2,457,979	+				+1.3
2,457,979	+				+1.0
2,457,979	+				+0.7
2,457,979	+				-1.7
2,457,979	+				-0.5
2,457,979	+				+1.4
2,457,980	-				+0.7
2,457,980	-				-0.3
2,457,980	-				-0.0
2,457,980	-				+1.0
2,457,980	-				-1.0
2,457,980	-				-1.0
2,457,980	-				+2.1
2,457,980	-				-0.5
2,457,980	-				-0.5
2,457,981	+				-0.5
2,457,981	+				-0.5
2,457,982	-				+0.4
2,458,078	+				+0.7
2,458,078	+				+1.5
2,458,078	+				-1.9
2,458,079	-				+1.2
2,458,079	-				+0.1
2,458,079	-				-0.5
2,458,079	-				+0.4
2,458,079	-				-1.2
2,458,079	-				+0.3
2,458,079	-				-0.6
2,458,147	+				+2.5
2,458,148	-				-0.4
2,458,149	+				+0.1
2,458,195	+				-0.5
2,459,323	+				-0.2
2,459,323	+				+0.6
2,459,323	+				-0.1
2,459,323	+				-0.5
2,459,323	+				-0.2
2,459,324	-				+0.3
2,459,324	-				-0.4
2,459,324	-				+1.0
2,459,324	-				-0.2
2,459,487	+		Psyr_2107	0.56	-0.6
2,459,487	+		Psyr_2107	0.56	+1.0
2,459,488	-		Psyr_2107	0.57	+0.8
2,459,488	-		Psyr_2107	0.57	-0.7
2,459,488	-		Psyr_2107	0.57	-0.8
2,459,488	-		Psyr_2107	0.57	+0.3
2,459,488	-		Psyr_2107	0.57	+0.2
2,459,488	-		Psyr_2107	0.57	+0.4
2,459,488	-		Psyr_2107	0.57	+0.3
2,459,488	-		Psyr_2107	0.57	+1.3
2,459,511	+		Psyr_2107	0.68	-0.3
2,459,511	+		Psyr_2107	0.68	+0.5
2,459,512	-		Psyr_2107	0.68	+0.1
2,459,568	+				+0.2
2,459,568	+				+0.2
2,459,568	+				+0.0
2,459,569	-				-0.6
2,459,580	+				-0.5
2,459,607	+				-0.0
2,459,607	+				+0.1
2,459,608	-				+1.5
2,459,608	-				+0.7
2,459,608	-				-0.2
2,459,608	-				-0.8
2,459,608	-				-0.4
2,459,610	+				+0.1
2,459,763	-				+0.1
2,459,882	+				-0.4
2,459,882	+				-0.0
2,459,925	+				+1.2
2,459,980	-				+0.5
2,459,980	-				+2.5
2,460,003	+				-0.6
2,460,012	+				+0.1
2,460,012	+				+0.6
2,460,013	-				+0.1
2,460,013	-				+1.4
2,460,013	-				-0.2
2,460,016	-				-0.6
2,460,163	+				+0.2
2,460,163	+				-0.0
2,460,163	+				+0.7
2,460,163	+				-0.2
2,460,164	-				+0.2
2,460,164	-				+0.1