Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1757

Experiment: KB with Acriflavine 1.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 1.25 ug/ml
1,995,722	+		Psyr_1756	0.31	-1.0
1,995,723	-		Psyr_1756	0.31	-1.8
1,995,726	+		Psyr_1756	0.31	-1.0
1,995,727	-		Psyr_1756	0.31	-3.0
1,995,727	-		Psyr_1756	0.31	-2.2
1,995,727	-		Psyr_1756	0.31	-0.4
1,995,727	-		Psyr_1756	0.31	-0.3
1,995,830	+		Psyr_1756	0.41	-3.0
1,995,858	+		Psyr_1756	0.44	-2.7
1,995,858	+		Psyr_1756	0.44	-3.0
1,995,858	+		Psyr_1756	0.44	-2.2
1,995,858	+		Psyr_1756	0.44	+0.4
1,995,858	+		Psyr_1756	0.44	-2.4
1,995,859	-		Psyr_1756	0.44	-1.8
1,995,859	-		Psyr_1756	0.44	-1.0
1,995,859	-		Psyr_1756	0.44	-1.8
1,995,859	-		Psyr_1756	0.44	-0.0
1,995,859	-		Psyr_1756	0.44	-2.7
1,996,014	+		Psyr_1756	0.60	-0.6
1,996,014	+		Psyr_1756	0.60	-3.1
1,996,015	-		Psyr_1756	0.60	-0.6
1,996,122	+		Psyr_1756	0.70	-2.0
1,996,122	+		Psyr_1756	0.70	-2.2
1,996,185	+		Psyr_1756	0.76	-0.0
1,996,185	+		Psyr_1756	0.76	-0.4
1,996,197	+		Psyr_1756	0.77	-3.4
1,996,197	+		Psyr_1756	0.77	-0.4
1,996,197	+		Psyr_1756	0.77	-2.7
1,996,198	-		Psyr_1756	0.78	-0.6
1,996,264	-		Psyr_1756	0.84	+0.4
1,996,426	+				-1.2
1,996,427	-				+0.4
1,996,474	+				-1.6
1,996,474	+				-1.6
1,996,475	-				-1.0
1,996,475	-				-2.1
1,996,753	+		Psyr_1757	0.30	+0.7
1,996,754	-		Psyr_1757	0.30	-1.6
1,996,754	-		Psyr_1757	0.30	-1.2
1,996,867	-		Psyr_1757	0.41	-2.8
1,996,894	+		Psyr_1757	0.43	-0.4
1,996,895	-		Psyr_1757	0.43	-0.0
1,996,895	-		Psyr_1757	0.43	-1.5
1,996,895	-		Psyr_1757	0.43	-0.8
1,996,895	-		Psyr_1757	0.43	-0.8
1,996,936	+		Psyr_1757	0.47	-1.4
1,997,025	+		Psyr_1757	0.56	-0.4
1,997,025	+		Psyr_1757	0.56	-1.6
1,997,026	-		Psyr_1757	0.56	+2.0
1,997,086	+		Psyr_1757	0.61	+1.0
1,997,086	+		Psyr_1757	0.61	+1.0
1,997,086	+		Psyr_1757	0.61	-2.0
1,997,086	+		Psyr_1757	0.61	-2.5
1,997,086	+		Psyr_1757	0.61	-0.0
1,997,087	-		Psyr_1757	0.61	-1.6
1,997,087	-		Psyr_1757	0.61	-0.8
1,997,087	-		Psyr_1757	0.61	-1.6
1,997,200	+		Psyr_1757	0.72	-1.4
1,997,201	-		Psyr_1757	0.72	-0.8
1,997,201	-		Psyr_1757	0.72	-0.5
1,997,201	-		Psyr_1757	0.72	+2.0
1,997,251	+		Psyr_1757	0.77	-1.8
1,997,251	+		Psyr_1757	0.77	-1.8
1,997,251	+		Psyr_1757	0.77	-0.4
1,997,252	-		Psyr_1757	0.77	-2.0
1,997,252	-		Psyr_1757	0.77	-1.0
1,997,252	-		Psyr_1757	0.77	-1.2
1,997,305	+		Psyr_1757	0.82	-3.0
1,997,306	-		Psyr_1757	0.82	-1.3
1,997,489	+				-0.6
1,997,489	+				-0.8
1,997,490	-				-2.2
1,997,491	+				-0.9
1,997,491	+				-1.7
1,997,491	+				-2.6
1,997,491	+				-0.0
1,997,492	-				-1.4
1,997,492	-				-0.4
1,997,492	-				-2.4
1,997,492	-				-0.3
1,997,505	+				-1.1
1,997,688	+				-0.6
1,997,688	+				-1.0
1,997,688	+				-2.4
1,997,688	+				-2.2
1,997,688	+				-0.7
1,997,689	-				-1.6
1,997,689	-				-2.8
1,997,689	-				-0.2
1,997,689	-				-3.3
1,997,689	-				-1.1
1,997,689	-				-0.6
1,997,850	+		Psyr_1758	0.19	-1.4
1,997,851	-		Psyr_1758	0.19	-1.9
1,997,937	+		Psyr_1758	0.23	-0.6
1,997,937	+		Psyr_1758	0.23	-2.6
1,997,937	+		Psyr_1758	0.23	-2.5
1,998,000	+		Psyr_1758	0.27	-2.7
1,998,000	+		Psyr_1758	0.27	-1.0
1,998,001	-		Psyr_1758	0.27	-1.6
1,998,001	-		Psyr_1758	0.27	-2.5
1,998,289	-		Psyr_1758	0.42	-0.4
1,998,306	+		Psyr_1758	0.43	-3.6
1,998,306	+		Psyr_1758	0.43	-2.5
1,998,306	+		Psyr_1758	0.43	-2.4