Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3861 and PfGW456L13_3862 are separated by 43 nucleotides PfGW456L13_3862 and PfGW456L13_3863 are separated by 268 nucleotides
PfGW456L13_3861 - putative membrane protein, at 4,324,256 to 4,324,813
_3861
PfGW456L13_3862 - DoxX family protein, at 4,324,857 to 4,325,273
_3862
PfGW456L13_3863 - hypothetical protein, at 4,325,542 to 4,325,808
_3863
Position (kb)
4325
4326 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.665 kb on + strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.666 kb on - strand, within PfGW456L13_3861 at 4324.864 kb on + strand at 4324.864 kb on + strand at 4324.864 kb on + strand at 4324.865 kb on - strand at 4324.865 kb on - strand at 4324.865 kb on - strand at 4325.024 kb on + strand, within PfGW456L13_3862 at 4325.025 kb on - strand, within PfGW456L13_3862 at 4325.161 kb on + strand, within PfGW456L13_3862 at 4325.363 kb on + strand at 4325.363 kb on + strand at 4325.363 kb on + strand at 4325.363 kb on + strand at 4325.363 kb on + strand at 4325.363 kb on + strand at 4325.363 kb on + strand at 4325.364 kb on - strand at 4325.364 kb on - strand at 4325.364 kb on - strand at 4325.364 kb on - strand at 4325.364 kb on - strand at 4325.364 kb on - strand at 4325.543 kb on + strand at 4325.543 kb on + strand at 4325.543 kb on + strand at 4325.544 kb on - strand at 4325.544 kb on - strand at 4325.563 kb on - strand at 4325.851 kb on - strand at 4326.079 kb on + strand at 4326.079 kb on + strand at 4326.080 kb on - strand at 4326.086 kb on - strand at 4326.137 kb on + strand at 4326.138 kb on - strand at 4326.201 kb on + strand at 4326.201 kb on + strand at 4326.201 kb on + strand at 4326.201 kb on + strand at 4326.202 kb on - strand at 4326.202 kb on - strand at 4326.226 kb on + strand at 4326.226 kb on + strand at 4326.226 kb on + strand at 4326.226 kb on + strand at 4326.226 kb on + strand at 4326.227 kb on - strand at 4326.227 kb on - strand at 4326.255 kb on + strand at 4326.270 kb on + strand at 4326.270 kb on + strand at 4326.270 kb on + strand at 4326.270 kb on + strand at 4326.270 kb on + strand at 4326.270 kb on + strand at 4326.270 kb on + strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.271 kb on - strand at 4326.332 kb on + strand at 4326.332 kb on + strand at 4326.332 kb on + strand at 4326.339 kb on + strand at 4326.339 kb on + strand at 4326.339 kb on + strand at 4326.339 kb on + strand at 4326.340 kb on - strand at 4326.340 kb on - strand at 4326.411 kb on + strand at 4326.412 kb on - strand at 4326.412 kb on - strand at 4326.412 kb on - strand at 4326.412 kb on - strand at 4326.412 kb on - strand at 4326.423 kb on + strand at 4326.423 kb on + strand at 4326.423 kb on + strand at 4326.423 kb on + strand at 4326.482 kb on + strand at 4326.482 kb on + strand at 4326.483 kb on - strand at 4326.483 kb on - strand at 4326.483 kb on - strand at 4326.483 kb on - strand at 4326.483 kb on - strand at 4326.483 kb on - strand at 4326.554 kb on + strand at 4326.554 kb on + strand at 4326.554 kb on + strand at 4326.555 kb on - strand at 4326.555 kb on - strand at 4326.610 kb on + strand at 4326.610 kb on + strand at 4326.610 kb on + strand at 4326.625 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 4,324,665 + PfGW456L13_3861 0.73 -0.3 4,324,665 + PfGW456L13_3861 0.73 -0.1 4,324,665 + PfGW456L13_3861 0.73 +1.3 4,324,665 + PfGW456L13_3861 0.73 -1.0 4,324,665 + PfGW456L13_3861 0.73 -0.1 4,324,665 + PfGW456L13_3861 0.73 +0.5 4,324,665 + PfGW456L13_3861 0.73 +1.7 4,324,665 + PfGW456L13_3861 0.73 -3.1 4,324,665 + PfGW456L13_3861 0.73 -3.0 4,324,665 + PfGW456L13_3861 0.73 -1.3 4,324,666 - PfGW456L13_3861 0.73 +0.9 4,324,666 - PfGW456L13_3861 0.73 +0.9 4,324,666 - PfGW456L13_3861 0.73 -1.5 4,324,666 - PfGW456L13_3861 0.73 -1.1 4,324,666 - PfGW456L13_3861 0.73 +0.9 4,324,666 - PfGW456L13_3861 0.73 -1.1 4,324,666 - PfGW456L13_3861 0.73 -3.5 4,324,666 - PfGW456L13_3861 0.73 -2.7 4,324,864 + -0.0 4,324,864 + -1.4 4,324,864 + +0.2 4,324,865 - +1.2 4,324,865 - -0.3 4,324,865 - -0.3 4,325,024 + PfGW456L13_3862 0.40 +0.3 4,325,025 - PfGW456L13_3862 0.40 -1.1 4,325,161 + PfGW456L13_3862 0.73 -1.1 4,325,363 + +1.0 4,325,363 + -1.1 4,325,363 + +0.9 4,325,363 + -2.0 4,325,363 + -1.4 4,325,363 + +1.9 4,325,363 + +0.2 4,325,364 - -0.8 4,325,364 - +0.2 4,325,364 - -2.5 4,325,364 - +0.1 4,325,364 - +0.4 4,325,364 - -0.5 4,325,543 + +0.1 4,325,543 + +0.1 4,325,543 + +0.4 4,325,544 - -1.0 4,325,544 - +0.5 4,325,563 - +0.4 4,325,851 - -2.7 4,326,079 + +0.1 4,326,079 + -3.0 4,326,080 - -0.8 4,326,086 - +1.0 4,326,137 + +0.7 4,326,138 - +0.8 4,326,201 + +0.6 4,326,201 + +0.0 4,326,201 + -1.5 4,326,201 + -0.5 4,326,202 - +0.0 4,326,202 - +1.6 4,326,226 + +1.6 4,326,226 + -0.1 4,326,226 + +0.1 4,326,226 + -2.7 4,326,226 + -0.9 4,326,227 - +0.2 4,326,227 - -1.5 4,326,255 + -0.1 4,326,270 + -0.7 4,326,270 + -2.4 4,326,270 + -3.3 4,326,270 + -1.6 4,326,270 + -0.7 4,326,270 + +1.6 4,326,270 + -3.6 4,326,271 - +0.5 4,326,271 - -1.4 4,326,271 - -0.7 4,326,271 - +0.2 4,326,271 - +0.3 4,326,271 - +0.4 4,326,271 - +0.9 4,326,271 - +0.1 4,326,271 - +0.3 4,326,332 + +0.4 4,326,332 + +0.8 4,326,332 + +0.6 4,326,339 + -0.3 4,326,339 + +1.4 4,326,339 + +0.7 4,326,339 + -1.1 4,326,340 - -1.1 4,326,340 - +0.9 4,326,411 + +0.7 4,326,412 - +1.0 4,326,412 - +0.6 4,326,412 - +0.0 4,326,412 - +1.0 4,326,412 - -0.3 4,326,423 + -0.1 4,326,423 + -3.3 4,326,423 + +1.4 4,326,423 + -1.8 4,326,482 + +0.1 4,326,482 + -0.3 4,326,483 - +1.6 4,326,483 - +2.1 4,326,483 - -2.7 4,326,483 - -0.1 4,326,483 - -2.0 4,326,483 - +1.3 4,326,554 + +1.2 4,326,554 + -1.7 4,326,554 + -0.0 4,326,555 - +2.5 4,326,555 - -0.5 4,326,610 + +1.8 4,326,610 + -0.7 4,326,610 + -3.9 4,326,625 + +1.7
Or see this region's nucleotide sequence