Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1465

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,619,153	+		PfGW456L13_1463	0.28	+1.3
1,619,153	+		PfGW456L13_1463	0.28	+1.7
1,619,153	+		PfGW456L13_1463	0.28	+0.5
1,619,153	+		PfGW456L13_1463	0.28	+1.1
1,619,154	-		PfGW456L13_1463	0.28	+1.3
1,619,154	-		PfGW456L13_1463	0.28	+0.2
1,619,154	-		PfGW456L13_1463	0.28	+1.3
1,619,154	-		PfGW456L13_1463	0.28	+0.3
1,619,154	-		PfGW456L13_1463	0.28	+1.5
1,619,154	-		PfGW456L13_1463	0.28	-0.1
1,619,154	-		PfGW456L13_1463	0.28	+1.4
1,619,393	+				+1.7
1,619,394	-				-2.3
1,619,394	-				+0.4
1,619,394	-				-0.3
1,619,494	+				-3.3
1,619,494	+				+0.6
1,619,526	+				+2.6
1,619,527	-				-2.0
1,619,527	-				+0.7
1,619,531	+				-1.7
1,619,582	-		PfGW456L13_1464	0.16	+1.0
1,619,855	+		PfGW456L13_1464	0.60	-1.7
1,619,862	+		PfGW456L13_1464	0.61	-0.6
1,619,862	+		PfGW456L13_1464	0.61	-2.0
1,619,863	-		PfGW456L13_1464	0.61	+1.1
1,619,863	-		PfGW456L13_1464	0.61	-2.6
1,619,904	+		PfGW456L13_1464	0.68	+0.4
1,619,904	+		PfGW456L13_1464	0.68	-0.2
1,619,904	+		PfGW456L13_1464	0.68	-2.0
1,620,003	+		PfGW456L13_1464	0.84	+0.8
1,620,003	+		PfGW456L13_1464	0.84	-0.1
1,620,003	+		PfGW456L13_1464	0.84	-1.3
1,620,003	+		PfGW456L13_1464	0.84	+0.7
1,620,003	+		PfGW456L13_1464	0.84	-0.2
1,620,003	+		PfGW456L13_1464	0.84	+0.5
1,620,004	-		PfGW456L13_1464	0.84	+0.4
1,620,004	-		PfGW456L13_1464	0.84	-1.3
1,620,004	-		PfGW456L13_1464	0.84	+0.3
1,620,004	-		PfGW456L13_1464	0.84	+0.8
1,620,004	-		PfGW456L13_1464	0.84	-0.3
1,620,004	-		PfGW456L13_1464	0.84	-0.5
1,620,004	-		PfGW456L13_1464	0.84	-0.8
1,620,004	-		PfGW456L13_1464	0.84	-4.4
1,620,025	-		PfGW456L13_1464	0.88	-0.3
1,620,025	-		PfGW456L13_1464	0.88	-1.5
1,620,064	+				-0.3
1,620,064	+				+0.1
1,620,064	+				+0.6
1,620,065	-				+2.1
1,620,070	+				+1.0
1,620,099	+				-0.1
1,620,099	+				-0.8
1,620,100	-				-0.1
1,620,100	-				+0.1
1,620,113	+				+0.7
1,620,113	+				-1.5
1,620,113	+				+0.8
1,620,113	+				+1.8
1,620,114	-				+1.8
1,620,114	-				-0.0
1,620,119	+				+0.8
1,620,155	-		PfGW456L13_1465	0.34	-2.4
1,620,164	+		PfGW456L13_1465	0.41	+1.2
1,620,213	+		PfGW456L13_1465	0.80	+0.3
1,620,213	+		PfGW456L13_1465	0.80	-0.3
1,620,214	-		PfGW456L13_1465	0.81	+2.1
1,620,214	-		PfGW456L13_1465	0.81	+0.3
1,620,237	+				+0.7
1,620,306	-		PfGW456L13_1466	0.28	-1.2
1,620,448	+		PfGW456L13_1466	0.83	+1.0
1,620,448	+		PfGW456L13_1466	0.83	+2.1
1,620,448	+		PfGW456L13_1466	0.83	-1.6
1,620,449	-		PfGW456L13_1466	0.83	+0.3
1,620,449	-		PfGW456L13_1466	0.83	+0.8
1,620,484	+				-0.3
1,620,484	+				-0.2
1,620,484	+				+0.5
1,620,484	+				+0.2
1,620,484	+				-0.2
1,620,484	+				-1.3
1,620,484	+				-2.5
1,620,484	+				+0.6
1,620,485	-				-0.3
1,620,485	-				+0.5
1,620,485	-				-0.8
1,620,485	-				+0.3
1,620,485	-				-0.8
1,620,554	-				+0.5
1,620,554	-				+0.8
1,620,554	-				+0.6
1,620,631	-				+0.3
1,620,631	-				+0.9
1,620,827	+		PfGW456L13_1467	0.38	+0.3
1,620,827	+		PfGW456L13_1467	0.38	-3.5
1,620,828	-		PfGW456L13_1467	0.39	+1.2
1,620,828	-		PfGW456L13_1467	0.39	+1.7
1,620,828	-		PfGW456L13_1467	0.39	+0.2
1,620,828	-		PfGW456L13_1467	0.39	+0.6
1,620,828	-		PfGW456L13_1467	0.39	+2.0
1,620,991	+		PfGW456L13_1467	0.86	+0.2
1,620,991	+		PfGW456L13_1467	0.86	+0.5
1,620,991	+		PfGW456L13_1467	0.86	-1.5
1,620,991	+		PfGW456L13_1467	0.86	-1.4
1,620,991	+		PfGW456L13_1467	0.86	-1.4
1,620,991	+		PfGW456L13_1467	0.86	-0.4
1,620,991	+		PfGW456L13_1467	0.86	+0.1
1,620,991	+		PfGW456L13_1467	0.86	-0.1
1,620,991	+		PfGW456L13_1467	0.86	+0.6
1,620,991	+		PfGW456L13_1467	0.86	+0.2
1,620,991	+		PfGW456L13_1467	0.86	-1.5
1,620,991	+		PfGW456L13_1467	0.86	+0.2
1,620,991	+		PfGW456L13_1467	0.86	-1.2
1,620,992	-		PfGW456L13_1467	0.87	-0.5
1,620,992	-		PfGW456L13_1467	0.87	+0.0
1,620,992	-		PfGW456L13_1467	0.87	-4.3
1,620,992	-		PfGW456L13_1467	0.87	+2.2
1,620,992	-		PfGW456L13_1467	0.87	+0.4
1,620,992	-		PfGW456L13_1467	0.87	-1.4
1,620,992	-		PfGW456L13_1467	0.87	-3.5
1,620,992	-		PfGW456L13_1467	0.87	+0.3
1,620,992	-		PfGW456L13_1467	0.87	+0.2
1,620,992	-		PfGW456L13_1467	0.87	+0.7
1,620,992	-		PfGW456L13_1467	0.87	-0.8
1,620,992	-		PfGW456L13_1467	0.87	+0.2
1,620,997	+		PfGW456L13_1467	0.88	-1.5
1,620,997	+		PfGW456L13_1467	0.88	+0.4
1,620,998	-		PfGW456L13_1467	0.88	-3.4
1,621,039	-				-2.4
1,621,077	+				+1.1
1,621,077	+				-0.0
1,621,077	+				-0.2
1,621,077	+				+0.9
1,621,077	+				+1.1
1,621,077	+				-0.4
1,621,077	+				+0.3
1,621,077	+				+0.6
1,621,077	+				-0.5
1,621,077	+				+1.0
1,621,078	-				-0.7
1,621,078	-				+0.5
1,621,078	-				-1.3
1,621,078	-				+1.4
1,621,078	-				+1.6
1,621,078	-				-1.3
1,621,078	-				+0.8
1,621,078	-				-2.3
1,621,078	-				-0.1
1,621,078	-				+1.2
1,621,078	-				+0.7
1,621,078	-				-0.1
1,621,078	-				-3.4
1,621,078	-				-1.0
1,621,079	+				+0.4
1,621,079	+				+0.7
1,621,079	+				-0.3
1,621,079	+				-2.8
1,621,080	-				+0.6
1,621,080	-				+1.5
1,621,081	+				-1.3
1,621,082	-				-0.7
1,621,089	+				-0.7
1,621,190	+				+0.2
1,621,190	+				-1.6
1,621,190	+				+0.7
1,621,190	+				+0.8
1,621,190	+				-1.0
1,621,190	+				+0.4
1,621,190	+				-0.1
1,621,191	-				+0.3
1,621,191	-				+0.8
1,621,191	-				-0.9
1,621,191	-				+0.7
1,621,191	-				-1.6
1,621,191	-				-1.8
1,621,191	-				-2.5
1,621,191	-				+0.7
1,621,191	-				+0.2
1,621,199	-				+0.8