Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1220

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,362,324	+		PfGW456L13_1218	0.69	+0.4
1,362,324	+		PfGW456L13_1218	0.69	-0.6
1,362,324	+		PfGW456L13_1218	0.69	-4.5
1,362,324	+		PfGW456L13_1218	0.69	-0.6
1,362,324	+		PfGW456L13_1218	0.69	-0.2
1,362,325	-		PfGW456L13_1218	0.69	-0.2
1,362,325	-		PfGW456L13_1218	0.69	+1.1
1,362,325	-		PfGW456L13_1218	0.69	-3.1
1,362,325	-		PfGW456L13_1218	0.69	+1.3
1,362,444	+		PfGW456L13_1218	0.76	-0.0
1,362,444	+		PfGW456L13_1218	0.76	+0.8
1,362,444	+		PfGW456L13_1218	0.76	+0.9
1,362,444	+		PfGW456L13_1218	0.76	-0.5
1,362,444	+		PfGW456L13_1218	0.76	-1.8
1,362,444	+		PfGW456L13_1218	0.76	+0.5
1,362,444	+		PfGW456L13_1218	0.76	-0.1
1,362,445	-		PfGW456L13_1218	0.76	-0.0
1,362,445	-		PfGW456L13_1218	0.76	-0.2
1,362,445	-		PfGW456L13_1218	0.76	-1.0
1,362,445	-		PfGW456L13_1218	0.76	-2.2
1,362,445	-		PfGW456L13_1218	0.76	-1.8
1,362,445	-		PfGW456L13_1218	0.76	-0.1
1,362,445	-		PfGW456L13_1218	0.76	+1.1
1,362,445	-		PfGW456L13_1218	0.76	+1.0
1,362,445	-		PfGW456L13_1218	0.76	+1.0
1,362,447	+		PfGW456L13_1218	0.76	-0.2
1,362,447	+		PfGW456L13_1218	0.76	-3.1
1,362,447	+		PfGW456L13_1218	0.76	+2.6
1,362,447	+		PfGW456L13_1218	0.76	-0.9
1,362,447	+		PfGW456L13_1218	0.76	+0.9
1,362,447	+		PfGW456L13_1218	0.76	-0.9
1,362,447	+		PfGW456L13_1218	0.76	+0.1
1,362,447	+		PfGW456L13_1218	0.76	+1.0
1,362,447	+		PfGW456L13_1218	0.76	+0.0
1,362,447	+		PfGW456L13_1218	0.76	+1.7
1,362,448	-		PfGW456L13_1218	0.76	+1.3
1,362,448	-		PfGW456L13_1218	0.76	+0.5
1,362,448	-		PfGW456L13_1218	0.76	-2.5
1,362,448	-		PfGW456L13_1218	0.76	+0.0
1,362,448	-		PfGW456L13_1218	0.76	+0.2
1,362,448	-		PfGW456L13_1218	0.76	+0.9
1,362,448	-		PfGW456L13_1218	0.76	+1.6
1,362,448	-		PfGW456L13_1218	0.76	+1.3
1,362,448	-		PfGW456L13_1218	0.76	+0.7
1,362,475	+		PfGW456L13_1218	0.77	-0.3
1,362,475	+		PfGW456L13_1218	0.77	-1.9
1,362,475	+		PfGW456L13_1218	0.77	+1.6
1,362,476	-		PfGW456L13_1218	0.77	+1.7
1,362,530	-		PfGW456L13_1218	0.80	-1.2
1,362,553	+		PfGW456L13_1218	0.81	-0.2
1,362,567	-		PfGW456L13_1218	0.82	+0.5
1,362,581	-		PfGW456L13_1218	0.83	-0.5
1,362,711	+		PfGW456L13_1218	0.90	+1.8
1,362,711	+		PfGW456L13_1218	0.90	-0.7
1,362,820	+				-0.4
1,362,821	-				+0.1
1,362,821	-				+1.0
1,362,821	-				+0.2
1,362,821	-				-1.9
1,362,823	-				+0.3
1,362,829	+				+1.1
1,362,829	+				+0.7
1,362,829	+				-0.2
1,362,829	+				-0.3
1,362,829	+				+0.5
1,362,884	+				+0.5
1,362,921	+				+1.2
1,362,922	-				+0.6
1,362,922	-				-0.9
1,362,922	-				-1.4
1,362,925	+				+0.8
1,362,925	+				+1.8
1,362,925	+				+2.6
1,362,925	+				+0.0
1,362,926	-				+0.6
1,362,926	-				-3.9
1,362,926	-				-0.6
1,362,933	+				+0.5
1,362,934	-				+0.7
1,362,934	-				-0.9
1,362,996	+				+1.0
1,362,996	+				+0.7
1,362,996	+				+0.7
1,362,997	-				-1.3
1,363,024	-				-0.9
1,363,024	-				-2.4
1,363,043	+				+1.3
1,363,043	+				-0.2
1,363,043	+				-0.5
1,363,043	+				+1.7
1,363,043	+				-1.8
1,363,044	-				-2.7
1,363,044	-				-0.2
1,363,044	-				-4.4
1,363,044	-				-1.6
1,363,044	-				-3.9
1,363,044	-				-2.9
1,363,044	-				-3.0
1,363,044	-				-3.6
1,363,044	-				-3.5
1,363,048	+				-2.9
1,363,048	+				+0.4
1,363,048	+				+0.2
1,363,049	-				-1.4
1,363,049	-				-2.4
1,363,049	-				-3.1
1,363,049	-				-2.7
1,363,063	+				-1.6
1,363,063	+				-2.3
1,363,096	+				+0.9
1,363,097	-				-3.7
1,363,195	+		PfGW456L13_1219	0.29	+0.8
1,363,196	-		PfGW456L13_1219	0.30	-2.9
1,363,196	-		PfGW456L13_1219	0.30	-2.9
1,363,196	-		PfGW456L13_1219	0.30	-3.3
1,363,226	-		PfGW456L13_1219	0.53	-2.1
1,363,262	-		PfGW456L13_1219	0.81	-4.5
1,363,284	-				-1.6
1,363,337	+				-2.5
1,363,337	+				-3.9
1,363,337	+				-1.9
1,363,337	+				-3.7
1,363,337	+				-3.3
1,363,337	+				-3.4
1,363,338	-				-2.8
1,363,338	-				-4.3
1,363,338	-				-4.0
1,363,338	-				-3.1
1,363,338	-				-3.6
1,363,338	-				-3.7
1,363,348	+				-3.9
1,363,349	-				-4.4
1,363,352	+				-3.2
1,363,352	+				-3.8
1,363,352	+				-3.2
1,363,352	+				-2.0
1,363,352	+				-1.9
1,363,352	+				-2.6
1,363,353	-				-4.2
1,363,353	-				-3.7
1,363,353	-				-4.9
1,363,353	-				-3.0
1,363,353	-				-5.1
1,363,353	-				-3.5
1,363,353	-				-3.1
1,363,353	-				-5.8
1,363,353	-				-3.1
1,363,367	+				-3.6
1,363,367	+				-1.2
1,363,367	+				-4.0
1,363,368	-				-4.5
1,363,394	-		PfGW456L13_1220	0.13	-4.7
1,363,533	+		PfGW456L13_1220	0.37	-2.8
1,363,534	-		PfGW456L13_1220	0.37	-4.9
1,363,621	+		PfGW456L13_1220	0.51	-3.5
1,363,621	+		PfGW456L13_1220	0.51	-5.9
1,363,622	-		PfGW456L13_1220	0.52	-4.6
1,363,622	-		PfGW456L13_1220	0.52	-2.1
1,363,628	-		PfGW456L13_1220	0.53	-2.9
1,363,628	-		PfGW456L13_1220	0.53	-3.3
1,363,636	-		PfGW456L13_1220	0.54	-3.6
1,363,636	-		PfGW456L13_1220	0.54	-4.4
1,363,656	+		PfGW456L13_1220	0.57	-3.6
1,363,656	+		PfGW456L13_1220	0.57	-2.3
1,363,657	-		PfGW456L13_1220	0.57	-2.8
1,363,657	-		PfGW456L13_1220	0.57	-2.2
1,363,657	-		PfGW456L13_1220	0.57	-3.0
1,363,657	-		PfGW456L13_1220	0.57	-3.2
1,364,185	+		PfGW456L13_1221	0.25	-4.1
1,364,185	+		PfGW456L13_1221	0.25	-3.6
1,364,186	-		PfGW456L13_1221	0.25	-3.5
1,364,186	-		PfGW456L13_1221	0.25	-4.3
1,364,236	+		PfGW456L13_1221	0.30	-4.2
1,364,236	+		PfGW456L13_1221	0.30	-3.4
1,364,236	+		PfGW456L13_1221	0.30	-2.6
1,364,236	+		PfGW456L13_1221	0.30	-0.8
1,364,237	-		PfGW456L13_1221	0.30	-4.6
1,364,237	-		PfGW456L13_1221	0.30	-2.7
1,364,237	-		PfGW456L13_1221	0.30	-0.9
1,364,308	+		PfGW456L13_1221	0.37	-3.3
1,364,309	-		PfGW456L13_1221	0.37	-3.8
1,364,309	-		PfGW456L13_1221	0.37	-4.1
1,364,312	+		PfGW456L13_1221	0.37	-3.1
1,364,312	+		PfGW456L13_1221	0.37	-3.3
1,364,312	+		PfGW456L13_1221	0.37	-1.6
1,364,312	+		PfGW456L13_1221	0.37	-4.3
1,364,312	+		PfGW456L13_1221	0.37	-3.7
1,364,312	+		PfGW456L13_1221	0.37	-3.4
1,364,312	+		PfGW456L13_1221	0.37	-5.1
1,364,312	+		PfGW456L13_1221	0.37	-3.6
1,364,312	+		PfGW456L13_1221	0.37	-4.0
1,364,313	-		PfGW456L13_1221	0.38	-4.3
1,364,313	-		PfGW456L13_1221	0.38	-1.8
1,364,313	-		PfGW456L13_1221	0.38	-4.4
1,364,313	-		PfGW456L13_1221	0.38	-4.1
1,364,313	-		PfGW456L13_1221	0.38	-4.8
1,364,313	-		PfGW456L13_1221	0.38	-2.3
1,364,313	-		PfGW456L13_1221	0.38	-3.4
1,364,405	+		PfGW456L13_1221	0.46	-5.0
1,364,405	+		PfGW456L13_1221	0.46	-5.4
1,364,405	+		PfGW456L13_1221	0.46	+0.9
1,364,405	+		PfGW456L13_1221	0.46	-3.2
1,364,406	-		PfGW456L13_1221	0.46	-5.0
1,364,440	+		PfGW456L13_1221	0.50	-3.6
1,364,441	-		PfGW456L13_1221	0.50	-2.3
1,364,441	-		PfGW456L13_1221	0.50	-2.3
1,364,467	+		PfGW456L13_1221	0.52	-2.7
1,364,468	-		PfGW456L13_1221	0.52	-4.4
1,364,505	+		PfGW456L13_1221	0.56	-4.2
1,364,505	+		PfGW456L13_1221	0.56	-3.3
1,364,505	+		PfGW456L13_1221	0.56	-2.6
1,364,505	+		PfGW456L13_1221	0.56	-4.1
1,364,506	-		PfGW456L13_1221	0.56	-3.5
1,364,506	-		PfGW456L13_1221	0.56	-3.8
1,364,506	-		PfGW456L13_1221	0.56	-3.1
1,364,506	-		PfGW456L13_1221	0.56	-3.0
1,364,509	+		PfGW456L13_1221	0.56	-4.8
1,364,509	+		PfGW456L13_1221	0.56	-3.8
1,364,510	-		PfGW456L13_1221	0.56	-4.5
1,364,661	-		PfGW456L13_1221	0.71	-4.5
1,364,831	+		PfGW456L13_1221	0.87	-5.0
1,364,831	+		PfGW456L13_1221	0.87	-2.8
1,364,831	+		PfGW456L13_1221	0.87	-2.1
1,364,832	-		PfGW456L13_1221	0.87	-4.3
1,364,832	-		PfGW456L13_1221	0.87	-4.4