Strain Fitness in Pseudomonas sp. S08-1 around OH686_23450

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,750,335	+		OH686_23440	0.24	+0.3
4,750,335	+		OH686_23440	0.24	+0.1
4,750,336	-		OH686_23440	0.25	-0.9
4,750,656	-				+0.1
4,750,756	+				-0.3
4,750,757	-				+0.9
4,750,778	+				+0.6
4,750,778	+				-0.7
4,750,787	+				-0.6
4,750,788	-				+1.3
4,750,788	-				+0.7
4,750,806	+				-0.3
4,750,807	-				+0.0
4,750,977	+		OH686_23445	0.34	+1.1
4,750,977	+		OH686_23445	0.34	+0.3
4,750,978	-		OH686_23445	0.34	-0.5
4,750,978	-		OH686_23445	0.34	+0.2
4,750,978	-		OH686_23445	0.34	-0.2
4,750,978	-		OH686_23445	0.34	+0.4
4,751,028	+		OH686_23445	0.47	-0.6
4,751,028	+		OH686_23445	0.47	+0.2
4,751,029	-		OH686_23445	0.48	-0.5
4,751,029	-		OH686_23445	0.48	-0.7
4,751,029	-		OH686_23445	0.48	+0.4
4,751,030	+		OH686_23445	0.48	-0.5
4,751,030	+		OH686_23445	0.48	+1.4
4,751,031	-		OH686_23445	0.48	+1.3
4,751,031	-		OH686_23445	0.48	-1.7
4,751,031	-		OH686_23445	0.48	+0.3
4,751,031	-		OH686_23445	0.48	-0.9
4,751,031	-		OH686_23445	0.48	+0.2
4,751,031	-		OH686_23445	0.48	+0.1
4,751,333	+				-0.2
4,751,333	+				+0.3
4,751,333	+				+0.1
4,751,333	+				-0.3
4,751,333	+				-0.1
4,751,333	+				-0.2
4,751,333	+				-1.2
4,751,334	-				-0.3
4,751,334	-				+0.6
4,751,334	-				-0.3
4,751,334	-				+0.0
4,751,334	-				-0.8
4,751,334	-				+0.9
4,751,334	-				+1.3
4,751,337	+				-0.0
4,751,337	+				-2.0
4,751,337	+				+0.7
4,751,337	+				-0.5
4,751,337	+				-0.7
4,751,337	+				+0.5
4,751,338	-				+1.6
4,751,338	-				+0.0
4,751,338	-				+1.4
4,751,354	+				-0.2
4,751,354	+				+0.6
4,751,354	+				+0.9
4,751,354	+				-0.1
4,751,355	-				+0.4
4,751,355	-				+0.2
4,751,355	-				+0.4
4,751,369	+				-0.0
4,751,369	+				-1.1
4,751,369	+				+1.3
4,751,369	+				-0.3
4,751,369	+				+0.3
4,751,370	-				-0.2
4,751,370	-				+0.3
4,751,419	+				+0.7
4,751,419	+				+0.6
4,751,419	+				-0.1
4,751,419	+				+0.3
4,751,420	-				-0.3
4,751,420	-				-0.3
4,751,420	-				+0.1
4,751,488	+				+0.3
4,751,489	-				-0.3
4,751,489	-				+1.0
4,751,508	+		OH686_23450	0.10	+1.7
4,751,509	-		OH686_23450	0.10	-0.5
4,751,509	-		OH686_23450	0.10	+0.2
4,751,553	+		OH686_23450	0.12	-0.0
4,751,553	+		OH686_23450	0.12	-0.0
4,751,553	+		OH686_23450	0.12	-0.7
4,751,554	-		OH686_23450	0.12	-0.8
4,751,554	-		OH686_23450	0.12	+1.6
4,751,554	-		OH686_23450	0.12	-1.1
4,751,617	+		OH686_23450	0.16	+0.4
4,751,617	+		OH686_23450	0.16	+1.1
4,751,618	-		OH686_23450	0.16	+0.8
4,751,618	-		OH686_23450	0.16	+0.1
4,751,715	+		OH686_23450	0.21	-0.4
4,751,715	+		OH686_23450	0.21	+0.5
4,751,716	-		OH686_23450	0.21	+0.2
4,751,725	-		OH686_23450	0.21	-3.1
4,752,021	-		OH686_23450	0.36	-0.2
4,752,037	-		OH686_23450	0.37	-0.1
4,752,048	+		OH686_23450	0.37	-0.0
4,752,048	+		OH686_23450	0.37	-0.6
4,752,048	+		OH686_23450	0.37	+0.5
4,752,048	+		OH686_23450	0.37	+0.3
4,752,048	+		OH686_23450	0.37	+0.2
4,752,049	-		OH686_23450	0.37	-0.5
4,752,049	-		OH686_23450	0.37	+0.3
4,752,049	-		OH686_23450	0.37	-0.4
4,752,049	-		OH686_23450	0.37	-1.4
4,752,050	+		OH686_23450	0.37	-0.5
4,752,050	+		OH686_23450	0.37	+1.6
4,752,050	+		OH686_23450	0.37	+0.1
4,752,222	+		OH686_23450	0.46	-0.5
4,752,222	+		OH686_23450	0.46	-0.3
4,752,223	-		OH686_23450	0.46	+0.7
4,752,223	-		OH686_23450	0.46	+0.2
4,752,306	+		OH686_23450	0.50	-0.5
4,752,306	+		OH686_23450	0.50	-0.7
4,752,306	+		OH686_23450	0.50	-0.1
4,752,306	+		OH686_23450	0.50	-1.1
4,752,306	+		OH686_23450	0.50	-0.9
4,752,307	-		OH686_23450	0.51	+0.5
4,752,307	-		OH686_23450	0.51	+1.3
4,752,307	-		OH686_23450	0.51	+0.7
4,752,307	-		OH686_23450	0.51	-0.4
4,752,307	-		OH686_23450	0.51	-0.1
4,752,480	+		OH686_23450	0.59	+0.6
4,752,481	-		OH686_23450	0.59	-0.5
4,752,690	+		OH686_23450	0.70	+0.4
4,752,690	+		OH686_23450	0.70	-0.3
4,752,690	+		OH686_23450	0.70	+1.6
4,752,691	-		OH686_23450	0.70	+0.9
4,752,691	-		OH686_23450	0.70	-2.9
4,752,691	-		OH686_23450	0.70	+0.5
4,752,691	-		OH686_23450	0.70	-0.1
4,752,691	-		OH686_23450	0.70	+0.5
4,752,691	-		OH686_23450	0.70	-0.4
4,752,691	-		OH686_23450	0.70	-0.5
4,752,696	+		OH686_23450	0.70	-0.0
4,752,712	+		OH686_23450	0.71	-0.6
4,752,712	+		OH686_23450	0.71	+0.3
4,752,712	+		OH686_23450	0.71	+0.1
4,752,712	+		OH686_23450	0.71	+0.3
4,752,712	+		OH686_23450	0.71	+0.2
4,752,713	-		OH686_23450	0.71	-1.0
4,752,713	-		OH686_23450	0.71	+0.9
4,752,713	-		OH686_23450	0.71	-0.2
4,752,713	-		OH686_23450	0.71	-0.6
4,752,713	-		OH686_23450	0.71	+0.3
4,752,713	-		OH686_23450	0.71	-2.0
4,752,713	-		OH686_23450	0.71	-1.3
4,752,713	-		OH686_23450	0.71	-0.1
4,752,753	+		OH686_23450	0.73	+0.3
4,752,753	+		OH686_23450	0.73	-1.1
4,752,753	+		OH686_23450	0.73	-0.6
4,752,754	-		OH686_23450	0.73	-1.6
4,752,754	-		OH686_23450	0.73	-0.4
4,752,754	-		OH686_23450	0.73	-0.0
4,752,754	-		OH686_23450	0.73	+0.6
4,752,885	+		OH686_23450	0.80	+0.5
4,752,885	+		OH686_23450	0.80	+1.5
4,752,885	+		OH686_23450	0.80	+2.1
4,752,886	-		OH686_23450	0.80	+0.6
4,752,886	-		OH686_23450	0.80	-0.1
4,752,886	-		OH686_23450	0.80	-0.3
4,752,886	-		OH686_23450	0.80	-0.0
4,752,886	-		OH686_23450	0.80	+1.5
4,752,906	+		OH686_23450	0.81	-0.4
4,752,907	-		OH686_23450	0.81	+0.3
4,752,907	-		OH686_23450	0.81	+0.0
4,753,000	-		OH686_23450	0.86	-0.6
4,753,000	-		OH686_23450	0.86	-0.4
4,753,071	+		OH686_23450	0.89	-0.7
4,753,071	+		OH686_23450	0.89	-1.0
4,753,071	+		OH686_23450	0.89	-0.1
4,753,072	-		OH686_23450	0.89	-0.6
4,753,072	-		OH686_23450	0.89	-1.1
4,753,072	-		OH686_23450	0.89	+0.7
4,753,072	-		OH686_23450	0.89	-0.7
4,753,072	-		OH686_23450	0.89	-0.5
4,753,072	-		OH686_23450	0.89	-1.3
4,753,072	-		OH686_23450	0.89	+0.3
4,753,072	-		OH686_23450	0.89	+0.2
4,753,216	-				+1.3
4,753,216	-				+0.1
4,753,216	-				-0.4
4,753,216	-				-0.5
4,753,218	+				-0.9
4,753,218	+				+0.2
4,753,218	+				+0.5
4,753,219	-				+0.1
4,753,219	-				+0.2
4,753,219	-				-0.3
4,753,219	-				-0.3
4,753,397	+		OH686_23455	0.16	-0.1
4,753,397	+		OH686_23455	0.16	+0.0
4,753,397	+		OH686_23455	0.16	+1.1
4,753,397	+		OH686_23455	0.16	-1.6
4,753,398	-		OH686_23455	0.16	-1.3
4,753,398	-		OH686_23455	0.16	-0.3
4,753,398	-		OH686_23455	0.16	-0.6
4,753,563	-		OH686_23455	0.39	+0.7
4,753,652	+		OH686_23455	0.52	-0.2
4,753,684	-		OH686_23455	0.56	+0.8
4,753,684	-		OH686_23455	0.56	-0.4
4,753,684	-		OH686_23455	0.56	+0.2
4,753,854	+		OH686_23455	0.80	-1.1
4,753,854	+		OH686_23455	0.80	-0.7
4,753,854	+		OH686_23455	0.80	-0.5
4,753,855	-		OH686_23455	0.80	+0.0
4,753,855	-		OH686_23455	0.80	-0.7
4,753,858	+		OH686_23455	0.80	-0.6
4,753,858	+		OH686_23455	0.80	-0.2
4,753,858	+		OH686_23455	0.80	-0.4
4,753,858	+		OH686_23455	0.80	+1.0
4,753,858	+		OH686_23455	0.80	-1.1
4,753,858	+		OH686_23455	0.80	-0.4
4,753,858	+		OH686_23455	0.80	-0.5
4,753,858	+		OH686_23455	0.80	-0.4
4,753,858	+		OH686_23455	0.80	-0.2
4,753,859	-		OH686_23455	0.80	+0.1
4,753,859	-		OH686_23455	0.80	+1.1
4,753,859	-		OH686_23455	0.80	-0.4
4,753,859	-		OH686_23455	0.80	+0.4
4,753,859	-		OH686_23455	0.80	+0.3
4,753,859	-		OH686_23455	0.80	-0.5
4,753,859	-		OH686_23455	0.80	-0.3
4,753,859	-		OH686_23455	0.80	+0.9
4,753,934	+				-0.6
4,753,934	+				-0.5
4,753,934	+				-0.2
4,753,935	-				+0.7
4,753,935	-				+0.5
4,753,935	-				+0.1
4,754,068	+				+0.6
4,754,068	+				-0.6
4,754,068	+				-0.4
4,754,068	+				+0.5
4,754,069	-				-0.4
4,754,109	+				+0.7
4,754,207	+		OH686_23460	0.16	-1.4
4,754,207	+		OH686_23460	0.16	-0.5
4,754,217	-		OH686_23460	0.17	-0.4
4,754,217	-		OH686_23460	0.17	+1.0
4,754,217	-		OH686_23460	0.17	+0.0
4,754,218	+		OH686_23460	0.17	+0.3
4,754,218	+		OH686_23460	0.17	+0.3
4,754,218	+		OH686_23460	0.17	-0.8
4,754,218	+		OH686_23460	0.17	-0.3
4,754,219	-		OH686_23460	0.17	-0.4
4,754,219	-		OH686_23460	0.17	-0.9
4,754,219	-		OH686_23460	0.17	-0.9
4,754,219	-		OH686_23460	0.17	-0.0
4,754,219	-		OH686_23460	0.17	+0.0
4,754,219	-		OH686_23460	0.17	+0.2