Strain Fitness in Pseudomonas sp. S08-1 around OH686_22425

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,557,345	+		OH686_22415	0.36	+0.1
4,557,429	+		OH686_22415	0.44	-0.2
4,557,429	+		OH686_22415	0.44	-0.5
4,557,429	+		OH686_22415	0.44	-1.0
4,557,429	+		OH686_22415	0.44	+0.1
4,557,430	-		OH686_22415	0.45	-0.4
4,557,430	-		OH686_22415	0.45	-0.8
4,557,430	-		OH686_22415	0.45	+0.1
4,557,430	-		OH686_22415	0.45	+0.8
4,557,531	+		OH686_22415	0.55	-0.7
4,557,531	+		OH686_22415	0.55	+2.0
4,557,531	+		OH686_22415	0.55	-0.5
4,557,531	+		OH686_22415	0.55	-1.0
4,557,531	+		OH686_22415	0.55	+1.0
4,557,531	+		OH686_22415	0.55	+0.7
4,557,531	+		OH686_22415	0.55	-1.3
4,557,531	+		OH686_22415	0.55	-1.2
4,557,531	+		OH686_22415	0.55	-0.4
4,557,531	+		OH686_22415	0.55	-0.2
4,557,531	+		OH686_22415	0.55	+0.6
4,557,531	+		OH686_22415	0.55	-0.8
4,557,531	+		OH686_22415	0.55	-1.4
4,557,532	-		OH686_22415	0.55	+0.8
4,557,532	-		OH686_22415	0.55	+0.4
4,557,532	-		OH686_22415	0.55	+0.2
4,557,532	-		OH686_22415	0.55	-0.1
4,557,532	-		OH686_22415	0.55	-0.3
4,557,532	-		OH686_22415	0.55	-0.9
4,557,532	-		OH686_22415	0.55	-0.3
4,557,532	-		OH686_22415	0.55	+0.7
4,557,532	-		OH686_22415	0.55	-0.7
4,557,532	-		OH686_22415	0.55	+0.3
4,557,532	-		OH686_22415	0.55	+0.3
4,557,532	-		OH686_22415	0.55	-0.1
4,557,540	+		OH686_22415	0.56	-0.1
4,557,540	+		OH686_22415	0.56	-0.3
4,557,540	+		OH686_22415	0.56	-0.1
4,557,540	+		OH686_22415	0.56	-0.6
4,557,540	+		OH686_22415	0.56	-0.4
4,557,540	+		OH686_22415	0.56	+0.3
4,557,540	+		OH686_22415	0.56	+0.0
4,557,540	+		OH686_22415	0.56	+0.0
4,557,541	-		OH686_22415	0.56	+0.2
4,557,541	-		OH686_22415	0.56	+0.5
4,557,541	-		OH686_22415	0.56	+0.6
4,557,541	-		OH686_22415	0.56	-0.3
4,557,541	-		OH686_22415	0.56	+0.0
4,557,541	-		OH686_22415	0.56	-0.6
4,557,541	-		OH686_22415	0.56	-0.0
4,557,541	-		OH686_22415	0.56	-0.3
4,557,543	+		OH686_22415	0.56	+0.7
4,557,543	+		OH686_22415	0.56	+0.4
4,557,543	+		OH686_22415	0.56	+0.2
4,557,543	+		OH686_22415	0.56	+0.3
4,557,543	+		OH686_22415	0.56	+0.1
4,557,543	+		OH686_22415	0.56	-0.4
4,557,543	+		OH686_22415	0.56	+0.6
4,557,543	+		OH686_22415	0.56	-1.6
4,557,543	+		OH686_22415	0.56	+0.5
4,557,543	+		OH686_22415	0.56	+0.2
4,557,544	-		OH686_22415	0.56	-0.3
4,557,544	-		OH686_22415	0.56	-0.4
4,557,544	-		OH686_22415	0.56	-1.8
4,557,544	-		OH686_22415	0.56	-0.7
4,557,544	-		OH686_22415	0.56	+0.8
4,557,544	-		OH686_22415	0.56	-0.1
4,557,544	-		OH686_22415	0.56	-0.6
4,557,637	-		OH686_22415	0.66	+0.0
4,557,637	-		OH686_22415	0.66	-0.1
4,557,683	+		OH686_22415	0.71	-0.9
4,557,684	-		OH686_22415	0.71	+0.2
4,557,684	-		OH686_22415	0.71	+0.9
4,557,693	+		OH686_22415	0.72	-1.2
4,557,693	+		OH686_22415	0.72	-1.5
4,557,693	+		OH686_22415	0.72	+0.8
4,557,694	-		OH686_22415	0.72	+0.4
4,557,694	-		OH686_22415	0.72	+1.0
4,557,694	-		OH686_22415	0.72	-0.1
4,557,694	-		OH686_22415	0.72	+0.1
4,557,694	-		OH686_22415	0.72	-0.4
4,557,694	-		OH686_22415	0.72	+0.8
4,557,735	+		OH686_22415	0.76	-0.1
4,557,735	+		OH686_22415	0.76	-0.7
4,557,736	-		OH686_22415	0.76	+0.4
4,557,736	-		OH686_22415	0.76	-0.6
4,557,736	-		OH686_22415	0.76	+0.3
4,557,736	-		OH686_22415	0.76	+1.6
4,557,855	+		OH686_22415	0.89	-0.9
4,557,856	-		OH686_22415	0.89	-1.0
4,557,964	-				-1.0
4,558,001	+				-0.5
4,558,001	+				-0.5
4,558,001	+				-0.1
4,558,001	+				-0.7
4,558,001	+				-1.7
4,558,001	+				-0.8
4,558,002	-				+0.0
4,558,002	-				+0.8
4,558,252	+				-0.8
4,558,252	+				+0.4
4,558,318	+				-0.4
4,558,318	+				+0.3
4,558,318	+				-1.1
4,558,318	+				+0.2
4,558,318	+				-0.4
4,558,353	+				+0.2
4,558,353	+				+0.3
4,558,354	-				-1.3
4,558,354	-				-1.7
4,558,435	+		OH686_22425	0.14	+0.2
4,558,435	+		OH686_22425	0.14	-0.5
4,558,435	+		OH686_22425	0.14	-0.4
4,558,435	+		OH686_22425	0.14	+0.8
4,558,435	+		OH686_22425	0.14	-1.9
4,558,435	+		OH686_22425	0.14	+0.2
4,558,436	-		OH686_22425	0.14	-1.3
4,558,436	-		OH686_22425	0.14	+0.7
4,558,436	-		OH686_22425	0.14	-0.8
4,558,436	-		OH686_22425	0.14	+0.0
4,558,436	-		OH686_22425	0.14	+1.4
4,558,436	-		OH686_22425	0.14	-0.5
4,558,436	-		OH686_22425	0.14	-0.7
4,558,472	-		OH686_22425	0.18	+1.6
4,558,555	+		OH686_22425	0.28	-0.2
4,558,555	+		OH686_22425	0.28	-0.8
4,558,555	+		OH686_22425	0.28	+0.2
4,558,555	+		OH686_22425	0.28	-1.9
4,558,555	+		OH686_22425	0.28	+0.5
4,558,555	+		OH686_22425	0.28	-0.6
4,558,555	+		OH686_22425	0.28	+0.8
4,558,555	+		OH686_22425	0.28	-1.2
4,558,555	+		OH686_22425	0.28	+0.1
4,558,556	-		OH686_22425	0.28	+0.1
4,558,556	-		OH686_22425	0.28	-0.1
4,558,556	-		OH686_22425	0.28	-0.3
4,558,556	-		OH686_22425	0.28	-0.4
4,558,556	-		OH686_22425	0.28	-0.3
4,558,556	-		OH686_22425	0.28	-1.5
4,558,556	-		OH686_22425	0.28	-0.2
4,558,556	-		OH686_22425	0.28	+0.9
4,558,556	-		OH686_22425	0.28	-0.2
4,558,556	-		OH686_22425	0.28	-0.7
4,558,556	-		OH686_22425	0.28	-1.0
4,558,605	+		OH686_22425	0.34	+0.6
4,558,605	+		OH686_22425	0.34	+2.0
4,558,605	+		OH686_22425	0.34	+0.4
4,558,605	+		OH686_22425	0.34	-0.4
4,558,605	+		OH686_22425	0.34	-0.2
4,558,605	+		OH686_22425	0.34	+0.0
4,558,605	+		OH686_22425	0.34	-0.7
4,558,605	+		OH686_22425	0.34	-1.8
4,558,606	-		OH686_22425	0.34	-0.3
4,558,606	-		OH686_22425	0.34	-0.1
4,558,606	-		OH686_22425	0.34	-0.2
4,558,609	+		OH686_22425	0.35	-0.5
4,558,609	+		OH686_22425	0.35	-0.0
4,558,609	+		OH686_22425	0.35	+0.4
4,558,610	-		OH686_22425	0.35	+1.3
4,558,610	-		OH686_22425	0.35	-0.0
4,558,762	+		OH686_22425	0.53	-0.1
4,558,762	+		OH686_22425	0.53	+1.0
4,558,762	+		OH686_22425	0.53	+0.7
4,558,762	+		OH686_22425	0.53	-0.9
4,558,762	+		OH686_22425	0.53	+0.1
4,558,762	+		OH686_22425	0.53	-0.3
4,558,762	+		OH686_22425	0.53	+0.1
4,558,762	+		OH686_22425	0.53	+1.0
4,558,762	+		OH686_22425	0.53	+0.6
4,558,762	+		OH686_22425	0.53	+1.1
4,558,762	+		OH686_22425	0.53	+0.6
4,558,762	+		OH686_22425	0.53	+0.9
4,558,762	+		OH686_22425	0.53	-0.8
4,558,763	-		OH686_22425	0.53	+0.6
4,558,763	-		OH686_22425	0.53	+0.6
4,558,763	-		OH686_22425	0.53	-0.4
4,558,763	-		OH686_22425	0.53	-0.0
4,558,763	-		OH686_22425	0.53	+0.5
4,558,763	-		OH686_22425	0.53	-2.1
4,558,763	-		OH686_22425	0.53	-0.9
4,558,763	-		OH686_22425	0.53	-0.9
4,558,763	-		OH686_22425	0.53	-0.3
4,558,763	-		OH686_22425	0.53	-1.2
4,558,826	+		OH686_22425	0.60	+1.6
4,558,826	+		OH686_22425	0.60	-0.6
4,558,827	-		OH686_22425	0.60	-0.3
4,558,827	-		OH686_22425	0.60	+0.4
4,558,827	-		OH686_22425	0.60	-0.3
4,558,875	+		OH686_22425	0.66	-0.2
4,558,875	+		OH686_22425	0.66	+0.8
4,558,876	-		OH686_22425	0.66	+0.6
4,558,900	+		OH686_22425	0.69	-0.6
4,558,900	+		OH686_22425	0.69	-0.2
4,558,900	+		OH686_22425	0.69	-0.4
4,558,900	+		OH686_22425	0.69	-1.2
4,558,900	+		OH686_22425	0.69	+0.5
4,558,901	-		OH686_22425	0.69	+1.4
4,558,901	-		OH686_22425	0.69	+0.6
4,558,901	-		OH686_22425	0.69	+1.6
4,559,017	+		OH686_22425	0.83	+0.5
4,559,017	+		OH686_22425	0.83	+1.0
4,559,017	+		OH686_22425	0.83	-0.5
4,559,017	+		OH686_22425	0.83	-0.0
4,559,017	+		OH686_22425	0.83	+0.1
4,559,018	-		OH686_22425	0.83	+0.3
4,559,018	-		OH686_22425	0.83	-0.6
4,559,018	-		OH686_22425	0.83	-0.0
4,559,018	-		OH686_22425	0.83	+0.7
4,559,018	-		OH686_22425	0.83	-0.5
4,559,018	-		OH686_22425	0.83	-0.5
4,559,063	+		OH686_22425	0.88	-2.0
4,559,153	+				+0.8
4,559,153	+				-0.1
4,559,153	+				-0.7
4,559,153	+				+0.2
4,559,153	+				-0.8
4,559,153	+				+0.5
4,559,153	+				-0.1
4,559,153	+				+0.4
4,559,154	-				+0.3
4,559,154	-				+0.5
4,559,154	-				-0.7
4,559,154	-				-0.1
4,559,159	+				+0.4
4,559,159	+				+0.5
4,559,159	+				+0.0
4,559,160	-				+0.3
4,559,160	-				+1.0
4,559,160	-				+0.9
4,559,160	-				-2.4
4,559,160	-				-1.1
4,559,160	-				-0.3
4,559,160	-				+0.4
4,559,160	-				-0.8
4,559,160	-				+0.3
4,559,160	-				+0.1
4,559,196	+				+0.5
4,559,196	+				-0.3
4,559,196	+				-1.0
4,559,196	+				+0.0
4,559,196	+				-0.2
4,559,197	-				-0.6
4,559,197	-				+0.1
4,559,197	-				-1.6
4,559,197	-				-0.4
4,559,197	-				+0.3
4,559,197	-				+0.6
4,559,197	-				+0.7
4,559,299	+				-0.9
4,559,299	+				+0.6
4,559,300	-				-0.1
4,559,464	+		OH686_22430	0.22	-0.5
4,559,464	+		OH686_22430	0.22	+0.6
4,559,465	-		OH686_22430	0.22	+0.2
4,559,575	+		OH686_22430	0.34	+0.2
4,559,575	+		OH686_22430	0.34	-0.6
4,559,575	+		OH686_22430	0.34	+1.2
4,559,575	+		OH686_22430	0.34	-0.4
4,559,575	+		OH686_22430	0.34	+0.5
4,559,575	+		OH686_22430	0.34	-0.4
4,559,575	+		OH686_22430	0.34	-0.3
4,559,575	+		OH686_22430	0.34	-0.5
4,559,575	+		OH686_22430	0.34	+0.4
4,559,575	+		OH686_22430	0.34	-0.7
4,559,575	+		OH686_22430	0.34	+0.9
4,559,575	+		OH686_22430	0.34	+1.4
4,559,575	+		OH686_22430	0.34	+0.4
4,559,575	+		OH686_22430	0.34	+0.1
4,559,575	+		OH686_22430	0.34	+0.3
4,559,575	+		OH686_22430	0.34	-0.5
4,559,575	+		OH686_22430	0.34	-0.0
4,559,575	+		OH686_22430	0.34	+1.5
4,559,575	+		OH686_22430	0.34	-0.5
4,559,576	-		OH686_22430	0.34	+1.7
4,559,576	-		OH686_22430	0.34	+0.0
4,559,576	-		OH686_22430	0.34	-0.2
4,559,576	-		OH686_22430	0.34	-0.2
4,559,576	-		OH686_22430	0.34	-0.5
4,559,576	-		OH686_22430	0.34	+0.5
4,559,576	-		OH686_22430	0.34	+0.5
4,559,576	-		OH686_22430	0.34	-0.2
4,559,576	-		OH686_22430	0.34	-0.3
4,559,576	-		OH686_22430	0.34	+0.8
4,559,576	-		OH686_22430	0.34	-0.3
4,559,623	+		OH686_22430	0.39	+0.3
4,559,624	-		OH686_22430	0.39	+1.2
4,559,686	+		OH686_22430	0.46	-0.9
4,559,686	+		OH686_22430	0.46	-1.3
4,559,686	+		OH686_22430	0.46	-1.1
4,559,782	+		OH686_22430	0.56	+0.3
4,559,783	-		OH686_22430	0.56	+0.2
4,559,783	-		OH686_22430	0.56	-0.2
4,559,783	-		OH686_22430	0.56	+0.1
4,559,999	-		OH686_22430	0.80	+0.1
4,559,999	-		OH686_22430	0.80	-0.6
4,560,091	+		OH686_22430	0.90	-0.7
4,560,091	+		OH686_22430	0.90	-1.9