Strain Fitness in Pseudomonas sp. S08-1 around OH686_15985

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,341,877	+		OH686_15980	0.22	+0.1
3,341,933	+		OH686_15980	0.27	+0.2
3,341,934	-		OH686_15980	0.28	-0.3
3,341,970	+		OH686_15980	0.31	+0.0
3,341,971	-		OH686_15980	0.31	+0.9
3,342,081	+		OH686_15980	0.40	+0.3
3,342,081	+		OH686_15980	0.40	-0.3
3,342,082	-		OH686_15980	0.41	-0.7
3,342,082	-		OH686_15980	0.41	-0.7
3,342,339	+		OH686_15980	0.63	-0.1
3,342,339	+		OH686_15980	0.63	-0.3
3,342,339	+		OH686_15980	0.63	+0.1
3,342,340	-		OH686_15980	0.63	-0.0
3,342,552	+		OH686_15980	0.82	+1.4
3,342,552	+		OH686_15980	0.82	-0.9
3,342,553	-		OH686_15980	0.82	-0.5
3,342,553	-		OH686_15980	0.82	-0.2
3,342,737	+				-1.0
3,342,738	-				-0.5
3,342,794	+				-0.2
3,342,794	+				+0.7
3,342,794	+				-1.0
3,342,794	+				+0.3
3,342,794	+				-0.6
3,342,795	-				-0.3
3,342,795	-				+1.9
3,342,795	-				-0.5
3,342,795	-				+0.8
3,342,797	+				+1.0
3,342,797	+				-0.2
3,342,797	+				-1.2
3,342,797	+				-1.0
3,342,797	+				-0.2
3,342,797	+				-1.1
3,342,798	-				+0.1
3,342,798	-				+0.8
3,342,798	-				-0.1
3,342,798	-				+0.9
3,342,798	-				+0.2
3,342,798	-				+0.3
3,343,038	-		OH686_15985	0.21	+0.3
3,343,079	+		OH686_15985	0.25	+0.2
3,343,079	+		OH686_15985	0.25	+0.3
3,343,080	-		OH686_15985	0.25	-0.7
3,343,080	-		OH686_15985	0.25	-0.5
3,343,080	-		OH686_15985	0.25	+1.6
3,343,100	+		OH686_15985	0.28	+1.4
3,343,116	-		OH686_15985	0.29	+1.1
3,343,145	+		OH686_15985	0.32	-0.3
3,343,145	+		OH686_15985	0.32	+1.3
3,343,145	+		OH686_15985	0.32	+0.0
3,343,146	-		OH686_15985	0.33	+0.1
3,343,146	-		OH686_15985	0.33	+0.4
3,343,146	-		OH686_15985	0.33	+0.1
3,343,159	+		OH686_15985	0.34	-0.6
3,343,165	+		OH686_15985	0.35	-0.9
3,343,166	-		OH686_15985	0.35	-0.2
3,343,234	+		OH686_15985	0.42	+0.2
3,343,264	+		OH686_15985	0.45	-0.5
3,343,304	+		OH686_15985	0.50	+0.3
3,343,304	+		OH686_15985	0.50	+1.5
3,343,304	+		OH686_15985	0.50	+0.6
3,343,304	+		OH686_15985	0.50	-1.3
3,343,304	+		OH686_15985	0.50	+0.1
3,343,305	-		OH686_15985	0.50	+0.1
3,343,305	-		OH686_15985	0.50	+0.6
3,343,305	-		OH686_15985	0.50	-1.0
3,343,305	-		OH686_15985	0.50	+0.8
3,343,305	-		OH686_15985	0.50	-0.4
3,343,343	+		OH686_15985	0.54	+0.2
3,343,343	+		OH686_15985	0.54	-0.1
3,343,344	-		OH686_15985	0.54	+0.5
3,343,547	+		OH686_15985	0.76	-0.5
3,343,547	+		OH686_15985	0.76	-0.3
3,343,547	+		OH686_15985	0.76	+1.7
3,343,547	+		OH686_15985	0.76	+0.3
3,343,547	+		OH686_15985	0.76	+1.3
3,343,547	+		OH686_15985	0.76	+0.8
3,343,548	-		OH686_15985	0.76	-1.3
3,343,548	-		OH686_15985	0.76	+0.4
3,343,548	-		OH686_15985	0.76	+0.0
3,343,548	-		OH686_15985	0.76	-0.8
3,343,548	-		OH686_15985	0.76	-0.3
3,343,548	-		OH686_15985	0.76	-0.4
3,343,548	-		OH686_15985	0.76	-0.9
3,343,578	+		OH686_15985	0.80	-2.7
3,343,578	+		OH686_15985	0.80	-0.1
3,343,580	+		OH686_15985	0.80	-1.7
3,343,580	+		OH686_15985	0.80	+0.3
3,343,580	+		OH686_15985	0.80	-0.5
3,343,580	+		OH686_15985	0.80	-0.4
3,343,580	+		OH686_15985	0.80	+0.0
3,343,580	+		OH686_15985	0.80	+0.3
3,343,580	+		OH686_15985	0.80	+0.1
3,343,580	+		OH686_15985	0.80	+0.1
3,343,581	-		OH686_15985	0.80	-0.3
3,343,581	-		OH686_15985	0.80	-0.2
3,343,581	-		OH686_15985	0.80	+0.2
3,343,581	-		OH686_15985	0.80	-0.1
3,343,581	-		OH686_15985	0.80	-0.0
3,343,581	-		OH686_15985	0.80	-1.9
3,343,581	-		OH686_15985	0.80	+0.3
3,343,581	-		OH686_15985	0.80	-1.1
3,343,581	-		OH686_15985	0.80	-0.6
3,343,581	-		OH686_15985	0.80	-0.1
3,343,581	-		OH686_15985	0.80	-0.3
3,343,581	-		OH686_15985	0.80	-0.5
3,343,581	-		OH686_15985	0.80	+0.2
3,343,736	+				-0.2
3,343,736	+				+0.1
3,343,737	-				+0.3
3,343,737	-				+0.3
3,343,737	-				-0.8
3,343,737	-				-0.8
3,343,749	-				+0.0
3,343,764	+				-0.1
3,343,764	+				-0.0
3,343,764	+				-1.0
3,343,764	+				+0.4
3,343,764	+				-0.3
3,343,765	-				+0.3
3,343,765	-				+0.2
3,343,809	+				-0.5
3,343,809	+				-1.9
3,343,809	+				-0.5
3,343,809	+				+1.1
3,343,809	+				+0.1
3,343,809	+				-0.5
3,343,809	+				+0.7
3,343,809	+				+1.0
3,343,809	+				-0.7
3,343,809	+				+0.8
3,343,809	+				+0.2
3,343,809	+				-0.5
3,343,809	+				-0.0
3,343,810	-				-1.5
3,343,810	-				+0.5
3,343,810	-				+0.9
3,343,810	-				-1.3
3,343,810	-				-0.0
3,343,810	-				+0.6
3,343,810	-				-0.3
3,343,810	-				-0.5
3,343,810	-				-1.4
3,343,810	-				+0.8
3,343,810	-				-0.1
3,343,810	-				-0.3
3,343,811	+				-1.4
3,343,811	+				-2.8
3,343,811	+				-1.1
3,343,811	+				-0.1
3,343,811	+				-2.2
3,343,811	+				-1.5
3,343,811	+				-2.6
3,343,811	+				-1.2
3,343,811	+				-1.4
3,343,811	+				-2.0
3,343,811	+				-1.7
3,343,811	+				-0.5
3,343,811	+				-1.6
3,343,811	+				-2.1
3,343,811	+				-1.0
3,343,811	+				-1.8
3,343,811	+				-1.6
3,343,811	+				-2.3
3,343,812	-				-2.2
3,343,812	-				-0.7
3,343,812	-				-0.9
3,343,812	-				-1.1
3,343,812	-				-3.0
3,343,812	-				-2.1
3,343,812	-				-1.7
3,343,812	-				-0.3
3,343,812	-				-0.8
3,343,812	-				-0.4
3,343,812	-				-2.8
3,343,812	-				-1.7
3,343,812	-				-1.8
3,343,812	-				-0.9
3,343,812	-				-1.4
3,343,812	-				-2.2
3,343,888	+		OH686_15990	0.14	-0.1
3,343,888	+		OH686_15990	0.14	+0.8
3,343,888	+		OH686_15990	0.14	-0.3
3,343,888	+		OH686_15990	0.14	-0.0
3,343,888	+		OH686_15990	0.14	-1.0
3,343,888	+		OH686_15990	0.14	+0.5
3,343,889	-		OH686_15990	0.14	-1.3
3,343,889	-		OH686_15990	0.14	-1.7
3,343,889	-		OH686_15990	0.14	-1.2
3,343,889	-		OH686_15990	0.14	-0.3
3,343,889	-		OH686_15990	0.14	-1.0
3,343,889	-		OH686_15990	0.14	-0.3
3,344,008	+		OH686_15990	0.35	-1.2
3,344,008	+		OH686_15990	0.35	-1.3
3,344,008	+		OH686_15990	0.35	-1.3
3,344,009	-		OH686_15990	0.35	-0.0
3,344,009	-		OH686_15990	0.35	-1.2
3,344,009	-		OH686_15990	0.35	+1.0
3,344,133	+		OH686_15990	0.58	+0.7
3,344,133	+		OH686_15990	0.58	+0.4
3,344,134	-		OH686_15990	0.58	-0.1
3,344,197	+		OH686_15990	0.69	+0.5
3,344,197	+		OH686_15990	0.69	-0.2
3,344,197	+		OH686_15990	0.69	+0.3
3,344,198	-		OH686_15990	0.70	+0.2
3,344,198	-		OH686_15990	0.70	-1.2
3,344,198	-		OH686_15990	0.70	+0.1
3,344,198	-		OH686_15990	0.70	+0.6
3,344,198	-		OH686_15990	0.70	-0.1
3,344,208	-		OH686_15990	0.71	-0.7
3,344,331	+				-0.7
3,344,383	+				-1.0
3,344,383	+				-0.7
3,344,416	+				-0.8
3,344,417	-				-0.5
3,344,530	+		OH686_15995	0.11	+1.1
3,344,602	+		OH686_15995	0.15	+0.2
3,344,602	+		OH686_15995	0.15	-0.8
3,344,602	+		OH686_15995	0.15	-1.4
3,344,603	-		OH686_15995	0.15	+0.8
3,344,603	-		OH686_15995	0.15	-0.2
3,344,603	-		OH686_15995	0.15	-0.3
3,344,603	-		OH686_15995	0.15	-0.9
3,344,603	-		OH686_15995	0.15	+0.2
3,344,701	+		OH686_15995	0.21	-0.8
3,344,701	+		OH686_15995	0.21	+0.3
3,344,701	+		OH686_15995	0.21	-0.3
3,344,701	+		OH686_15995	0.21	-0.6
3,344,701	+		OH686_15995	0.21	-2.5
3,344,701	+		OH686_15995	0.21	-1.5
3,344,702	-		OH686_15995	0.21	-0.5
3,344,702	-		OH686_15995	0.21	+0.7
3,344,752	+		OH686_15995	0.25	-1.0
3,344,752	+		OH686_15995	0.25	-0.5
3,344,752	+		OH686_15995	0.25	+0.2
3,344,753	-		OH686_15995	0.25	+0.3
3,344,753	-		OH686_15995	0.25	-1.2