Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23350 and ABID97_RS23355 are separated by 218 nucleotides ABID97_RS23355 and ABID97_RS23360 are separated by 76 nucleotides ABID97_RS23360 and ABID97_RS23365 overlap by 4 nucleotides
ABID97_RS23350: ABID97_RS23350 - lysophospholipid acyltransferase family protein, at 4,829,080 to 4,829,976
_RS23350
ABID97_RS23355: ABID97_RS23355 - methionine adenosyltransferase, at 4,830,195 to 4,831,376
_RS23355
ABID97_RS23360: ABID97_RS23360 - hypothetical protein, at 4,831,453 to 4,831,632
_RS23360
ABID97_RS23365: ABID97_RS23365 - PepSY domain-containing protein, at 4,831,629 to 4,832,810
_RS23365
Position (kb) 4830
4831
4832 Strain fitness (log2 ratio) -1
0
1
2 at 4829.997 kb on + strand at 4830.034 kb on + strand at 4830.034 kb on + strand at 4830.034 kb on + strand at 4830.035 kb on - strand at 4830.057 kb on + strand at 4830.129 kb on + strand at 4831.472 kb on + strand, within ABID97_RS23360 at 4831.741 kb on + strand at 4831.742 kb on - strand at 4831.742 kb on - strand at 4831.816 kb on + strand, within ABID97_RS23365 at 4831.817 kb on - strand, within ABID97_RS23365 at 4831.817 kb on - strand, within ABID97_RS23365 at 4831.862 kb on - strand, within ABID97_RS23365 at 4831.862 kb on - strand, within ABID97_RS23365 at 4832.108 kb on - strand, within ABID97_RS23365 at 4832.138 kb on - strand, within ABID97_RS23365 at 4832.138 kb on - strand, within ABID97_RS23365 at 4832.146 kb on + strand, within ABID97_RS23365 at 4832.147 kb on - strand, within ABID97_RS23365 at 4832.147 kb on - strand, within ABID97_RS23365 at 4832.314 kb on + strand, within ABID97_RS23365 at 4832.314 kb on + strand, within ABID97_RS23365 at 4832.314 kb on + strand, within ABID97_RS23365
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,829,997 + +1.0 4,830,034 + +0.7 4,830,034 + +2.0 4,830,034 + +0.3 4,830,035 - -0.1 4,830,057 + +0.8 4,830,129 + +0.2 4,831,472 + ABID97_RS23360 0.11 -0.8 4,831,741 + -0.2 4,831,742 - -0.1 4,831,742 - +1.4 4,831,816 + ABID97_RS23365 0.16 +0.4 4,831,817 - ABID97_RS23365 0.16 +0.0 4,831,817 - ABID97_RS23365 0.16 +0.4 4,831,862 - ABID97_RS23365 0.20 +0.3 4,831,862 - ABID97_RS23365 0.20 -0.2 4,832,108 - ABID97_RS23365 0.41 +0.0 4,832,138 - ABID97_RS23365 0.43 +0.8 4,832,138 - ABID97_RS23365 0.43 -0.4 4,832,146 + ABID97_RS23365 0.44 +0.7 4,832,147 - ABID97_RS23365 0.44 -0.1 4,832,147 - ABID97_RS23365 0.44 +0.1 4,832,314 + ABID97_RS23365 0.58 +0.2 4,832,314 + ABID97_RS23365 0.58 +0.3 4,832,314 + ABID97_RS23365 0.58 +0.3
Or see this region's nucleotide sequence