Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03320 and ABID97_RS03325 are separated by 27 nucleotides ABID97_RS03325 and ABID97_RS03330 overlap by 4 nucleotides
ABID97_RS03320: ABID97_RS03320 - tripartite tricarboxylate transporter substrate binding protein, at 669,534 to 670,526
_RS03320
ABID97_RS03325: ABID97_RS03325 - SDR family oxidoreductase, at 670,554 to 671,474
_RS03325
ABID97_RS03330: ABID97_RS03330 - AMP-binding protein, at 671,471 to 674,383
_RS03330
Position (kb) 670
671
672 Strain fitness (log2 ratio) -1
0
1
2 at 669.810 kb on + strand, within ABID97_RS03320 at 669.810 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.877 kb on - strand, within ABID97_RS03320 at 670.014 kb on + strand, within ABID97_RS03320 at 670.014 kb on + strand, within ABID97_RS03320 at 670.014 kb on + strand, within ABID97_RS03320 at 670.015 kb on - strand, within ABID97_RS03320 at 670.101 kb on + strand, within ABID97_RS03320 at 670.102 kb on - strand, within ABID97_RS03320 at 670.461 kb on + strand at 670.462 kb on - strand at 670.462 kb on - strand at 670.462 kb on - strand at 670.524 kb on + strand at 670.525 kb on - strand at 670.920 kb on + strand, within ABID97_RS03325 at 670.920 kb on + strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.924 kb on - strand, within ABID97_RS03325 at 671.562 kb on - strand at 671.784 kb on - strand, within ABID97_RS03330 at 671.939 kb on + strand, within ABID97_RS03330 at 671.939 kb on + strand, within ABID97_RS03330 at 671.939 kb on + strand, within ABID97_RS03330 at 671.940 kb on - strand, within ABID97_RS03330 at 672.218 kb on + strand, within ABID97_RS03330 at 672.219 kb on - strand at 672.219 kb on - strand, within ABID97_RS03330 at 672.287 kb on + strand, within ABID97_RS03330 at 672.288 kb on - strand, within ABID97_RS03330 at 672.288 kb on - strand, within ABID97_RS03330
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 669,810 + ABID97_RS03320 0.28 -0.2 669,810 + ABID97_RS03320 0.28 -0.1 669,876 + ABID97_RS03320 0.34 +0.0 669,876 + ABID97_RS03320 0.34 +0.5 669,876 + ABID97_RS03320 0.34 +0.3 669,876 + ABID97_RS03320 0.34 -0.2 669,876 + ABID97_RS03320 0.34 -0.1 669,877 - ABID97_RS03320 0.35 +0.2 670,014 + ABID97_RS03320 0.48 -0.1 670,014 + ABID97_RS03320 0.48 +0.0 670,014 + ABID97_RS03320 0.48 -0.2 670,015 - ABID97_RS03320 0.48 +0.3 670,101 + ABID97_RS03320 0.57 +0.2 670,102 - ABID97_RS03320 0.57 +0.2 670,461 + +0.1 670,462 - -0.2 670,462 - -0.6 670,462 - -0.8 670,524 + -0.4 670,525 - -0.0 670,920 + ABID97_RS03325 0.40 -0.5 670,920 + ABID97_RS03325 0.40 +1.0 670,921 - ABID97_RS03325 0.40 -0.2 670,921 - ABID97_RS03325 0.40 +0.1 670,921 - ABID97_RS03325 0.40 -0.1 670,921 - ABID97_RS03325 0.40 -0.0 670,921 - ABID97_RS03325 0.40 -0.3 670,921 - ABID97_RS03325 0.40 -0.2 670,921 - ABID97_RS03325 0.40 +0.2 670,921 - ABID97_RS03325 0.40 -0.2 670,923 + ABID97_RS03325 0.40 +1.2 670,923 + ABID97_RS03325 0.40 +0.4 670,923 + ABID97_RS03325 0.40 +0.1 670,923 + ABID97_RS03325 0.40 -0.2 670,923 + ABID97_RS03325 0.40 +0.3 670,924 - ABID97_RS03325 0.40 +0.2 671,562 - -0.7 671,784 - ABID97_RS03330 0.11 -0.4 671,939 + ABID97_RS03330 0.16 +0.2 671,939 + ABID97_RS03330 0.16 +0.0 671,939 + ABID97_RS03330 0.16 -0.0 671,940 - ABID97_RS03330 0.16 -0.6 672,218 + ABID97_RS03330 0.26 +0.3 672,219 - +2.2 672,219 - ABID97_RS03330 0.26 -0.4 672,287 + ABID97_RS03330 0.28 -0.0 672,288 - ABID97_RS03330 0.28 -0.5 672,288 - ABID97_RS03330 0.28 -0.6
Or see this region's nucleotide sequence