Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_666 and PfGW456L13_667 are separated by 572 nucleotides PfGW456L13_667 and PfGW456L13_668 are separated by 220 nucleotides PfGW456L13_668 and PfGW456L13_669 are separated by 240 nucleotides
PfGW456L13_666 - Chromosomal replication initiator protein DnaA, at 757,182 to 758,696
_666
PfGW456L13_667 - LSU ribosomal protein L34p, at 759,269 to 759,403
_667
PfGW456L13_668 - Ribonuclease P protein component (EC 3.1.26.5), at 759,624 to 759,821
_668
PfGW456L13_669 - Inner membrane protein translocase component YidC, long form, at 760,062 to 761,741
_669
Position (kb) 759
760 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 758.988 kb on + strand at 758.988 kb on + strand at 759.013 kb on + strand at 759.066 kb on + strand at 759.103 kb on + strand at 759.109 kb on + strand at 759.115 kb on + strand at 759.115 kb on + strand at 759.115 kb on + strand at 759.152 kb on + strand at 759.152 kb on + strand at 759.152 kb on + strand at 759.152 kb on + strand at 759.152 kb on + strand at 759.152 kb on + strand at 759.152 kb on + strand at 759.156 kb on + strand at 759.156 kb on + strand at 759.156 kb on + strand at 759.796 kb on + strand, within PfGW456L13_668 at 759.796 kb on + strand, within PfGW456L13_668 at 759.819 kb on + strand at 759.847 kb on + strand at 759.861 kb on + strand at 759.917 kb on + strand at 759.974 kb on + strand at 759.974 kb on + strand at 760.023 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 758,988 + +0.2 758,988 + +0.0 759,013 + -2.6 759,066 + -1.5 759,103 + +1.1 759,109 + -3.7 759,115 + -1.0 759,115 + +0.4 759,115 + -2.5 759,152 + -1.8 759,152 + +0.1 759,152 + +0.4 759,152 + -2.0 759,152 + +0.3 759,152 + +0.9 759,152 + +0.6 759,156 + -2.3 759,156 + +1.1 759,156 + -3.0 759,796 + PfGW456L13_668 0.87 +1.7 759,796 + PfGW456L13_668 0.87 +0.2 759,819 + -0.3 759,847 + +0.9 759,861 + +0.8 759,917 + +1.0 759,974 + -0.6 759,974 + -0.5 760,023 + +0.1
Or see this region's nucleotide sequence