Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_653 and PfGW456L13_654 are separated by 158 nucleotides PfGW456L13_654 and PfGW456L13_655 are separated by 0 nucleotides PfGW456L13_655 and PfGW456L13_656 are separated by 159 nucleotides
PfGW456L13_653 - Trk system potassium uptake protein TrkA, at 743,740 to 745,116
_653
PfGW456L13_654 - Chaperone protein YscY (Yop proteins translocation protein Y), at 745,275 to 745,589
_654
PfGW456L13_655 - FIG00954045: hypothetical protein, at 745,590 to 745,829
_655
PfGW456L13_656 - Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-), at 745,989 to 746,876
_656
Position (kb) 745
746 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 744.365 kb on + strand, within PfGW456L13_653 at 744.365 kb on + strand, within PfGW456L13_653 at 744.366 kb on - strand, within PfGW456L13_653 at 744.433 kb on + strand, within PfGW456L13_653 at 744.433 kb on + strand, within PfGW456L13_653 at 744.433 kb on + strand, within PfGW456L13_653 at 744.434 kb on - strand, within PfGW456L13_653 at 744.434 kb on - strand, within PfGW456L13_653 at 744.435 kb on + strand, within PfGW456L13_653 at 744.436 kb on - strand, within PfGW456L13_653 at 744.534 kb on - strand, within PfGW456L13_653 at 744.534 kb on - strand, within PfGW456L13_653 at 744.672 kb on + strand, within PfGW456L13_653 at 744.742 kb on + strand, within PfGW456L13_653 at 744.742 kb on + strand, within PfGW456L13_653 at 744.742 kb on + strand, within PfGW456L13_653 at 744.742 kb on + strand, within PfGW456L13_653 at 744.743 kb on - strand, within PfGW456L13_653 at 744.743 kb on - strand, within PfGW456L13_653 at 744.978 kb on + strand, within PfGW456L13_653 at 745.068 kb on + strand at 745.068 kb on + strand at 745.080 kb on - strand at 745.080 kb on - strand at 745.080 kb on - strand at 745.080 kb on - strand at 745.080 kb on - strand at 745.132 kb on + strand at 745.135 kb on + strand at 745.170 kb on + strand at 745.170 kb on + strand at 745.230 kb on + strand at 745.235 kb on + strand at 745.235 kb on + strand at 745.235 kb on + strand at 745.235 kb on + strand at 745.235 kb on + strand at 745.235 kb on + strand at 745.236 kb on - strand at 745.236 kb on - strand at 745.236 kb on - strand at 745.236 kb on - strand at 745.236 kb on - strand at 745.236 kb on - strand at 745.350 kb on + strand, within PfGW456L13_654 at 745.351 kb on - strand, within PfGW456L13_654 at 745.351 kb on - strand, within PfGW456L13_654 at 745.419 kb on + strand, within PfGW456L13_654 at 745.420 kb on - strand, within PfGW456L13_654 at 745.438 kb on + strand, within PfGW456L13_654 at 745.597 kb on + strand at 745.598 kb on - strand at 745.665 kb on + strand, within PfGW456L13_655 at 745.665 kb on + strand, within PfGW456L13_655 at 745.666 kb on - strand, within PfGW456L13_655 at 745.666 kb on - strand, within PfGW456L13_655 at 745.666 kb on - strand, within PfGW456L13_655 at 745.685 kb on - strand, within PfGW456L13_655 at 745.733 kb on - strand, within PfGW456L13_655 at 745.733 kb on - strand, within PfGW456L13_655 at 745.733 kb on - strand, within PfGW456L13_655 at 745.733 kb on - strand, within PfGW456L13_655 at 745.733 kb on - strand, within PfGW456L13_655 at 745.859 kb on + strand at 745.859 kb on + strand at 745.860 kb on - strand at 745.993 kb on + strand at 746.047 kb on + strand at 746.047 kb on + strand at 746.048 kb on - strand at 746.048 kb on - strand at 746.072 kb on - strand at 746.125 kb on + strand, within PfGW456L13_656 at 746.125 kb on + strand, within PfGW456L13_656 at 746.125 kb on + strand, within PfGW456L13_656 at 746.126 kb on - strand, within PfGW456L13_656 at 746.126 kb on - strand, within PfGW456L13_656 at 746.486 kb on - strand, within PfGW456L13_656 at 746.486 kb on - strand, within PfGW456L13_656
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 744,365 + PfGW456L13_653 0.45 -0.0 744,365 + PfGW456L13_653 0.45 -1.1 744,366 - PfGW456L13_653 0.45 +1.2 744,433 + PfGW456L13_653 0.50 -1.1 744,433 + PfGW456L13_653 0.50 +0.3 744,433 + PfGW456L13_653 0.50 -0.9 744,434 - PfGW456L13_653 0.50 +0.7 744,434 - PfGW456L13_653 0.50 +0.8 744,435 + PfGW456L13_653 0.50 +0.6 744,436 - PfGW456L13_653 0.51 -2.5 744,534 - PfGW456L13_653 0.58 -1.2 744,534 - PfGW456L13_653 0.58 -2.4 744,672 + PfGW456L13_653 0.68 -3.2 744,742 + PfGW456L13_653 0.73 -2.1 744,742 + PfGW456L13_653 0.73 -3.1 744,742 + PfGW456L13_653 0.73 -0.1 744,742 + PfGW456L13_653 0.73 -0.7 744,743 - PfGW456L13_653 0.73 -0.9 744,743 - PfGW456L13_653 0.73 +0.2 744,978 + PfGW456L13_653 0.90 +0.5 745,068 + -3.0 745,068 + +0.0 745,080 - -1.9 745,080 - -1.4 745,080 - -2.1 745,080 - +0.7 745,080 - +0.5 745,132 + -1.4 745,135 + +1.1 745,170 + -0.9 745,170 + +1.5 745,230 + +0.2 745,235 + +1.9 745,235 + +0.3 745,235 + -0.6 745,235 + +0.2 745,235 + -2.5 745,235 + -1.2 745,236 - -0.1 745,236 - -2.1 745,236 - -1.2 745,236 - +1.3 745,236 - +0.1 745,236 - +1.9 745,350 + PfGW456L13_654 0.24 -1.0 745,351 - PfGW456L13_654 0.24 +0.9 745,351 - PfGW456L13_654 0.24 -2.1 745,419 + PfGW456L13_654 0.46 -0.1 745,420 - PfGW456L13_654 0.46 -0.4 745,438 + PfGW456L13_654 0.52 +0.0 745,597 + +0.3 745,598 - -1.2 745,665 + PfGW456L13_655 0.31 -1.7 745,665 + PfGW456L13_655 0.31 +0.8 745,666 - PfGW456L13_655 0.32 -1.5 745,666 - PfGW456L13_655 0.32 -2.7 745,666 - PfGW456L13_655 0.32 +0.1 745,685 - PfGW456L13_655 0.40 -0.6 745,733 - PfGW456L13_655 0.60 -0.2 745,733 - PfGW456L13_655 0.60 -1.6 745,733 - PfGW456L13_655 0.60 +0.3 745,733 - PfGW456L13_655 0.60 -2.5 745,733 - PfGW456L13_655 0.60 +1.2 745,859 + +1.2 745,859 + +1.6 745,860 - +0.3 745,993 + -2.8 746,047 + -1.9 746,047 + -1.8 746,048 - -2.1 746,048 - -2.3 746,072 - -1.2 746,125 + PfGW456L13_656 0.15 -1.8 746,125 + PfGW456L13_656 0.15 -2.5 746,125 + PfGW456L13_656 0.15 -1.8 746,126 - PfGW456L13_656 0.15 -1.2 746,126 - PfGW456L13_656 0.15 -3.1 746,486 - PfGW456L13_656 0.56 -1.2 746,486 - PfGW456L13_656 0.56 -2.6
Or see this region's nucleotide sequence