Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4118

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
4,633,259	-		PfGW456L13_4117	0.30	+0.5
4,633,260	+		PfGW456L13_4117	0.30	-1.3
4,633,260	+		PfGW456L13_4117	0.30	+0.4
4,633,260	+		PfGW456L13_4117	0.30	-2.7
4,633,260	+		PfGW456L13_4117	0.30	+0.7
4,633,260	+		PfGW456L13_4117	0.30	+0.1
4,633,260	+				-0.9
4,633,260	+		PfGW456L13_4117	0.30	-0.9
4,633,261	-		PfGW456L13_4117	0.30	+0.0
4,633,261	-		PfGW456L13_4117	0.30	-2.5
4,633,261	-		PfGW456L13_4117	0.30	+0.2
4,633,261	-		PfGW456L13_4117	0.30	-4.1
4,633,261	-		PfGW456L13_4117	0.30	-1.7
4,633,261	-		PfGW456L13_4117	0.30	+1.2
4,633,261	-		PfGW456L13_4117	0.30	-1.5
4,633,261	-		PfGW456L13_4117	0.30	-2.6
4,633,431	+		PfGW456L13_4117	0.45	-0.9
4,633,432	-		PfGW456L13_4117	0.45	+0.5
4,633,644	+		PfGW456L13_4117	0.64	+1.4
4,633,644	+		PfGW456L13_4117	0.64	-1.3
4,633,644	+		PfGW456L13_4117	0.64	-0.7
4,633,644	+				-0.5
4,633,645	-		PfGW456L13_4117	0.64	+0.3
4,633,645	-		PfGW456L13_4117	0.64	+0.1
4,633,645	-		PfGW456L13_4117	0.64	+2.2
4,633,645	-		PfGW456L13_4117	0.64	+1.1
4,633,645	-		PfGW456L13_4117	0.64	+0.5
4,633,845	+		PfGW456L13_4117	0.82	+2.1
4,633,845	+		PfGW456L13_4117	0.82	+0.3
4,633,845	+		PfGW456L13_4117	0.82	-0.2
4,633,845	+		PfGW456L13_4117	0.82	-0.1
4,633,845	+		PfGW456L13_4117	0.82	+0.4
4,633,845	+		PfGW456L13_4117	0.82	-1.3
4,633,845	+		PfGW456L13_4117	0.82	-2.5
4,633,845	+		PfGW456L13_4117	0.82	+0.8
4,633,845	+		PfGW456L13_4117	0.82	-2.4
4,633,846	-		PfGW456L13_4117	0.82	+0.3
4,633,846	-		PfGW456L13_4117	0.82	-0.3
4,633,846	-		PfGW456L13_4117	0.82	-0.1
4,633,846	-		PfGW456L13_4117	0.82	+1.4
4,633,846	-		PfGW456L13_4117	0.82	-3.7
4,633,846	-		PfGW456L13_4117	0.82	-2.1
4,633,846	-		PfGW456L13_4117	0.82	-1.5
4,633,846	-		PfGW456L13_4117	0.82	+2.1
4,633,882	-		PfGW456L13_4117	0.85	+1.9
4,633,893	+		PfGW456L13_4117	0.86	-3.3
4,633,934	+		PfGW456L13_4117	0.90	+0.4
4,633,934	+		PfGW456L13_4117	0.90	-1.4
4,633,934	+		PfGW456L13_4117	0.90	+0.3
4,633,934	+		PfGW456L13_4117	0.90	+0.2
4,633,935	-		PfGW456L13_4117	0.90	+0.4
4,633,935	-		PfGW456L13_4117	0.90	-2.3
4,633,935	-		PfGW456L13_4117	0.90	+0.8
4,633,935	-		PfGW456L13_4117	0.90	+0.9
4,633,941	+				-2.6
4,633,942	-				-0.0
4,634,100	-				+1.2
4,634,100	-				+1.0
4,634,100	-				-0.2
4,634,151	-				+0.8
4,634,162	+				-1.1
4,634,162	+				-2.1
4,634,162	+				-1.3
4,634,163	-				+1.1
4,634,163	-				+0.2
4,634,163	-				+0.5
4,634,163	-				-0.5
4,634,163	-				-0.5
4,634,163	-				-0.9
4,634,193	+				-0.3
4,634,193	+				-0.9
4,634,194	-				-2.7
4,634,199	+				+1.3
4,634,199	+				-0.3
4,634,199	+				-1.3
4,634,200	-				+0.6
4,634,200	-				+0.2
4,634,261	+				-0.6
4,634,261	+				+0.1
4,634,261	+				+0.5
4,634,262	-				+1.6
4,634,276	+				-1.9
4,634,276	+				-3.9
4,634,277	-				-0.3
4,634,346	-		PfGW456L13_4118	0.15	+0.1
4,634,407	+		PfGW456L13_4118	0.22	-2.9
4,634,407	+		PfGW456L13_4118	0.22	-0.5
4,634,407	+		PfGW456L13_4118	0.22	-1.7
4,634,408	-		PfGW456L13_4118	0.22	-3.5
4,634,408	-		PfGW456L13_4118	0.22	+1.4
4,634,438	+		PfGW456L13_4118	0.25	+0.5
4,634,438	+		PfGW456L13_4118	0.25	-1.3
4,634,439	-		PfGW456L13_4118	0.25	-0.6
4,634,439	-		PfGW456L13_4118	0.25	+0.9
4,634,439	-		PfGW456L13_4118	0.25	-1.6
4,634,439	-		PfGW456L13_4118	0.25	-2.5
4,634,467	-				-0.5
4,634,510	+		PfGW456L13_4118	0.33	+0.1
4,634,510	+		PfGW456L13_4118	0.33	+0.9
4,634,510	+		PfGW456L13_4118	0.33	+1.1
4,634,510	+		PfGW456L13_4118	0.33	-1.9
4,634,511	-		PfGW456L13_4118	0.34	-0.3
4,634,511	-		PfGW456L13_4118	0.34	-0.2
4,634,511	-		PfGW456L13_4118	0.34	-3.6
4,634,511	-		PfGW456L13_4118	0.34	-0.6
4,634,800	-		PfGW456L13_4118	0.66	-0.3
4,634,969	+		PfGW456L13_4118	0.85	-3.6
4,634,969	+		PfGW456L13_4118	0.85	-0.6
4,634,969	+		PfGW456L13_4118	0.85	+0.4
4,634,970	-		PfGW456L13_4118	0.85	+0.4
4,635,143	-				-0.8
4,635,316	+		PfGW456L13_4119	0.30	-1.1
4,635,317	-		PfGW456L13_4119	0.30	-1.2
4,635,347	+		PfGW456L13_4119	0.34	-0.9
4,635,348	-		PfGW456L13_4119	0.35	+0.1
4,635,348	-		PfGW456L13_4119	0.35	+0.5
4,635,406	+		PfGW456L13_4119	0.43	-1.9
4,635,407	-		PfGW456L13_4119	0.43	-1.4
4,635,407	-		PfGW456L13_4119	0.43	-2.7
4,635,407	-		PfGW456L13_4119	0.43	+1.0
4,635,407	-		PfGW456L13_4119	0.43	-0.6
4,635,410	-		PfGW456L13_4119	0.43	-1.8
4,635,544	+		PfGW456L13_4119	0.62	-1.5
4,635,545	-		PfGW456L13_4119	0.62	+1.0
4,635,546	+		PfGW456L13_4119	0.62	-2.3
4,635,546	+		PfGW456L13_4119	0.62	+1.3
4,635,546	+		PfGW456L13_4119	0.62	-0.9
4,635,546	+		PfGW456L13_4119	0.62	+1.6
4,635,546	+		PfGW456L13_4119	0.62	-0.3
4,635,546	+		PfGW456L13_4119	0.62	-1.3
4,635,547	-		PfGW456L13_4119	0.62	+1.0
4,635,547	-		PfGW456L13_4119	0.62	-0.7
4,635,547	-		PfGW456L13_4119	0.62	-3.0
4,635,788	+				+0.5
4,635,861	+				+0.1
4,635,861	+				-0.4
4,635,861	+				+0.6
4,635,861	+				-3.5
4,635,861	+				+1.3
4,635,861	+				-0.9
4,635,861	+				-2.9
4,635,861	+				-0.6
4,635,861	+				+0.2
4,635,862	-				+0.1
4,635,862	-				-1.2
4,635,862	-				-0.1
4,635,862	-				-0.0
4,635,862	-				-1.3
4,635,862	-				+0.5
4,635,862	-				-2.6
4,635,862	-				+0.1
4,635,862	-				-1.5
4,635,882	-				+0.9
4,635,947	+				+0.2
4,635,948	-				-3.1
4,635,948	-				-1.2
4,635,988	+				-0.2
4,635,988	+				+0.6
4,635,989	-				-1.1
4,635,989	-				-4.0
4,635,989	-				-2.3
4,636,033	+				-0.1
4,636,034	-				-0.9
4,636,050	+				+1.4
4,636,050	+				-0.3
4,636,050	+				+0.4
4,636,050	+				-3.8
4,636,050	+				+0.9
4,636,051	-				+0.5
4,636,051	-				-1.3