Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3950

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
4,428,827	-				-2.7
4,429,004	+		PfGW456L13_3949	0.23	+0.9
4,429,005	-		PfGW456L13_3949	0.23	-1.8
4,429,031	-		PfGW456L13_3949	0.26	+0.3
4,429,148	+		PfGW456L13_3949	0.39	-0.9
4,429,196	+		PfGW456L13_3949	0.44	+1.4
4,429,197	-		PfGW456L13_3949	0.45	-3.1
4,429,393	+		PfGW456L13_3949	0.67	+1.6
4,429,469	+		PfGW456L13_3949	0.75	-1.8
4,429,469	+		PfGW456L13_3949	0.75	-1.6
4,429,469	+		PfGW456L13_3949	0.75	+0.1
4,429,469	+		PfGW456L13_3949	0.75	-0.5
4,429,469	+		PfGW456L13_3949	0.75	-0.4
4,429,470	-		PfGW456L13_3949	0.75	+1.1
4,429,557	+		PfGW456L13_3949	0.85	+0.7
4,429,557	+		PfGW456L13_3949	0.85	-0.6
4,429,557	+		PfGW456L13_3949	0.85	-2.8
4,429,572	+		PfGW456L13_3949	0.87	-1.1
4,429,572	+		PfGW456L13_3949	0.87	+1.0
4,429,573	-		PfGW456L13_3949	0.87	+1.8
4,429,590	+		PfGW456L13_3949	0.89	+0.3
4,429,590	+		PfGW456L13_3949	0.89	+1.8
4,429,590	+		PfGW456L13_3949	0.89	+0.5
4,429,591	-		PfGW456L13_3949	0.89	-2.0
4,429,591	-		PfGW456L13_3949	0.89	-1.1
4,429,591	-		PfGW456L13_3949	0.89	-2.2
4,429,595	+		PfGW456L13_3949	0.89	-1.9
4,429,595	+		PfGW456L13_3949	0.89	-2.1
4,429,595	+		PfGW456L13_3949	0.89	+0.8
4,429,595	+		PfGW456L13_3949	0.89	+0.7
4,429,596	-		PfGW456L13_3949	0.89	+0.1
4,429,596	-		PfGW456L13_3949	0.89	+0.3
4,429,596	-		PfGW456L13_3949	0.89	-0.2
4,429,597	+		PfGW456L13_3949	0.89	-0.3
4,429,597	+		PfGW456L13_3949	0.89	+1.7
4,429,597	+		PfGW456L13_3949	0.89	-2.3
4,429,597	+		PfGW456L13_3949	0.89	-3.1
4,429,597	+		PfGW456L13_3949	0.89	+0.5
4,429,597	+		PfGW456L13_3949	0.89	+1.6
4,429,597	+		PfGW456L13_3949	0.89	+0.6
4,429,598	-		PfGW456L13_3949	0.90	-0.3
4,429,598	-		PfGW456L13_3949	0.90	-1.4
4,429,598	-		PfGW456L13_3949	0.90	+1.4
4,429,598	-		PfGW456L13_3949	0.90	+1.1
4,429,598	-		PfGW456L13_3949	0.90	-1.1
4,429,598	-		PfGW456L13_3949	0.90	+1.5
4,429,688	+				-0.4
4,429,698	+				+0.6
4,429,698	+				-1.2
4,429,777	-				-2.8
4,429,794	+				+0.1
4,429,797	-				-2.3
4,429,797	-				-2.3
4,429,797	-				+1.8
4,429,797	-				-0.4
4,429,889	-				-0.2
4,430,172	-		PfGW456L13_3950	0.13	-0.4
4,430,172	-		PfGW456L13_3950	0.13	-0.9
4,430,314	+		PfGW456L13_3950	0.17	-2.0
4,430,315	-		PfGW456L13_3950	0.17	+0.8
4,430,533	+		PfGW456L13_3950	0.24	+1.3
4,430,533	+		PfGW456L13_3950	0.24	-0.1
4,430,534	-		PfGW456L13_3950	0.24	-0.2
4,430,537	+		PfGW456L13_3950	0.24	-0.2
4,430,537	+		PfGW456L13_3950	0.24	+0.6
4,430,537	+		PfGW456L13_3950	0.24	-0.3
4,430,537	+		PfGW456L13_3950	0.24	-0.5
4,430,537	+		PfGW456L13_3950	0.24	+2.6
4,430,538	-		PfGW456L13_3950	0.24	+1.4
4,430,538	-		PfGW456L13_3950	0.24	-0.4
4,430,538	-		PfGW456L13_3950	0.24	+2.1
4,430,538	-		PfGW456L13_3950	0.24	+1.7
4,430,538	-		PfGW456L13_3950	0.24	+0.6
4,430,538	-		PfGW456L13_3950	0.24	+0.1
4,430,824	+		PfGW456L13_3950	0.33	+0.8
4,430,824	+		PfGW456L13_3950	0.33	+0.9
4,430,824	+		PfGW456L13_3950	0.33	+0.1
4,430,825	-		PfGW456L13_3950	0.33	-0.9
4,430,825	-		PfGW456L13_3950	0.33	-2.8
4,430,825	-		PfGW456L13_3950	0.33	-1.0
4,430,825	-		PfGW456L13_3950	0.33	-0.4
4,430,836	+		PfGW456L13_3950	0.33	+0.9
4,431,472	+		PfGW456L13_3950	0.52	+0.8
4,431,505	+		PfGW456L13_3950	0.53	+0.9
4,431,740	-		PfGW456L13_3950	0.61	-2.6
4,432,222	-		PfGW456L13_3950	0.75	-3.6
4,432,235	-		PfGW456L13_3950	0.76	-1.1
4,432,235	-		PfGW456L13_3950	0.76	+0.6
4,432,327	+		PfGW456L13_3950	0.78	-3.3
4,432,328	-		PfGW456L13_3950	0.78	-1.0
4,432,537	+		PfGW456L13_3950	0.85	-1.6
4,432,537	+		PfGW456L13_3950	0.85	+0.6
4,432,624	+		PfGW456L13_3950	0.87	-0.4
4,432,624	+		PfGW456L13_3950	0.87	+1.5
4,432,624	+		PfGW456L13_3950	0.87	-1.7
4,432,625	-		PfGW456L13_3950	0.87	-0.3
4,432,625	-		PfGW456L13_3950	0.87	+0.2
4,432,625	-		PfGW456L13_3950	0.87	+2.5
4,432,625	-		PfGW456L13_3950	0.87	+0.2
4,432,625	-		PfGW456L13_3950	0.87	-0.7
4,432,777	+				+1.9
4,432,777	+				+0.8
4,432,972	+				+0.4
4,432,972	+				+0.1
4,432,973	-				+1.0
4,432,973	-				+0.2
4,432,973	-				-0.3
4,432,973	-				-0.7
4,432,981	+				-1.5
4,432,981	+				+0.6
4,432,981	+				-0.5
4,432,981	+				-1.0
4,432,982	-				+0.4
4,432,982	-				-0.6
4,432,982	-				+1.0
4,432,982	-				+0.8
4,433,156	+		PfGW456L13_3951	0.17	-3.9
4,433,268	+		PfGW456L13_3951	0.42	-1.6
4,433,268	+		PfGW456L13_3951	0.42	-0.7
4,433,268	+		PfGW456L13_3951	0.42	-1.0
4,433,268	+		PfGW456L13_3951	0.42	-0.0
4,433,268	+		PfGW456L13_3951	0.42	+2.4
4,433,268	+		PfGW456L13_3951	0.42	-0.7
4,433,268	+		PfGW456L13_3951	0.42	+3.7
4,433,268	+		PfGW456L13_3951	0.42	+1.2
4,433,268	+		PfGW456L13_3951	0.42	-0.0
4,433,268	+		PfGW456L13_3951	0.42	-3.4
4,433,268	+		PfGW456L13_3951	0.42	+0.7
4,433,269	-		PfGW456L13_3951	0.42	-0.3
4,433,269	-		PfGW456L13_3951	0.42	+0.9
4,433,269	-		PfGW456L13_3951	0.42	+1.5
4,433,269	-		PfGW456L13_3951	0.42	-0.2
4,433,269	-		PfGW456L13_3951	0.42	+0.6
4,433,269	-		PfGW456L13_3951	0.42	-0.6
4,433,269	-		PfGW456L13_3951	0.42	-2.0
4,433,269	-		PfGW456L13_3951	0.42	+1.7
4,433,269	-		PfGW456L13_3951	0.42	+1.0
4,433,269	-		PfGW456L13_3951	0.42	+1.4
4,433,269	-		PfGW456L13_3951	0.42	-2.1
4,433,269	-		PfGW456L13_3951	0.42	+0.2
4,433,372	+		PfGW456L13_3951	0.65	-0.2
4,433,373	-				-0.0
4,433,373	-		PfGW456L13_3951	0.65	+1.3
4,433,373	-		PfGW456L13_3951	0.65	+1.0
4,433,383	-		PfGW456L13_3951	0.68	-0.5
4,433,410	+		PfGW456L13_3951	0.74	+1.6
4,433,410	+		PfGW456L13_3951	0.74	-2.2
4,433,411	-		PfGW456L13_3951	0.74	+0.1
4,433,411	-		PfGW456L13_3951	0.74	-3.5
4,433,412	+		PfGW456L13_3951	0.74	+1.0
4,433,412	+		PfGW456L13_3951	0.74	-0.4
4,433,412	+		PfGW456L13_3951	0.74	+1.8
4,433,412	+		PfGW456L13_3951	0.74	-2.1
4,433,412	+		PfGW456L13_3951	0.74	+0.5
4,433,412	+		PfGW456L13_3951	0.74	-2.6
4,433,412	+		PfGW456L13_3951	0.74	-1.8
4,433,412	+		PfGW456L13_3951	0.74	-1.2
4,433,412	+		PfGW456L13_3951	0.74	+0.1
4,433,413	-		PfGW456L13_3951	0.74	+1.0
4,433,413	-		PfGW456L13_3951	0.74	-0.8
4,433,413	-		PfGW456L13_3951	0.74	+2.0
4,433,413	-		PfGW456L13_3951	0.74	-4.1
4,433,413	-		PfGW456L13_3951	0.74	+0.1
4,433,413	-		PfGW456L13_3951	0.74	-2.0
4,433,413	-		PfGW456L13_3951	0.74	-2.4
4,433,413	-				-1.3
4,433,413	-		PfGW456L13_3951	0.74	+0.3
4,433,413	-		PfGW456L13_3951	0.74	+1.3
4,433,413	-		PfGW456L13_3951	0.74	-1.3
4,433,421	+		PfGW456L13_3951	0.76	-0.2
4,433,422	-		PfGW456L13_3951	0.76	+0.3
4,433,422	-		PfGW456L13_3951	0.76	+0.9
4,433,422	-		PfGW456L13_3951	0.76	-0.1
4,433,514	-				-0.2
4,433,518	+				-1.1
4,433,518	+				+0.6
4,433,518	+				-1.6
4,433,518	+				-1.8
4,433,518	+				+0.7
4,433,518	+				-1.3
4,433,518	+				-0.8
4,433,518	+				-3.6
4,433,518	+				-2.5
4,433,518	+				+1.8
4,433,519	-				-1.8
4,433,519	-				+0.7
4,433,519	-				+0.0
4,433,519	-				+0.9
4,433,519	-				-1.8
4,433,519	-				+0.4
4,433,519	-				+1.3
4,433,519	-				-3.3
4,433,519	-				-0.4
4,433,519	-				-0.4
4,433,519	-				-0.0
4,433,519	-				-4.2
4,433,519	-				+0.8
4,433,594	-				+1.8
4,433,600	+				-1.0
4,433,600	+				-2.2
4,433,604	+				-0.7
4,433,605	-				-0.2
4,433,757	+		PfGW456L13_3952	0.10	+0.4
4,433,757	+		PfGW456L13_3952	0.10	-2.9