Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3168

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
3,547,512	-				+0.4
3,547,597	+				+0.9
3,547,597	+				-1.0
3,547,597	+				+0.5
3,547,598	-		PfGW456L13_3167	0.10	+1.2
3,547,598	-		PfGW456L13_3167	0.10	-0.5
3,547,598	-		PfGW456L13_3167	0.10	-1.2
3,547,848	-		PfGW456L13_3167	0.39	-0.2
3,548,133	+		PfGW456L13_3167	0.73	-0.9
3,548,134	-		PfGW456L13_3167	0.73	+0.4
3,548,149	-		PfGW456L13_3167	0.75	+0.7
3,548,149	-		PfGW456L13_3167	0.75	-1.8
3,548,149	-		PfGW456L13_3167	0.75	+0.6
3,548,149	-		PfGW456L13_3167	0.75	-0.4
3,548,240	-		PfGW456L13_3167	0.85	-0.5
3,548,292	+				+0.4
3,548,293	-				-0.0
3,548,293	-				-0.4
3,548,293	-				-4.2
3,548,482	-				+0.2
3,548,556	+				+0.1
3,548,556	+				-1.0
3,548,556	+				+0.5
3,548,556	+				+0.3
3,548,669	+		PfGW456L13_3168	0.15	+1.6
3,548,669	+		PfGW456L13_3168	0.15	-0.2
3,548,670	-		PfGW456L13_3168	0.15	+2.1
3,548,670	-		PfGW456L13_3168	0.15	-0.2
3,548,670	-		PfGW456L13_3168	0.15	+0.6
3,548,673	+		PfGW456L13_3168	0.16	-3.4
3,548,673	+		PfGW456L13_3168	0.16	-3.4
3,548,673	+		PfGW456L13_3168	0.16	-0.2
3,548,673	+		PfGW456L13_3168	0.16	+0.6
3,548,674	-		PfGW456L13_3168	0.16	+0.9
3,548,892	+		PfGW456L13_3168	0.32	+1.5
3,548,893	-		PfGW456L13_3168	0.32	-0.2
3,548,893	-		PfGW456L13_3168	0.32	+0.2
3,548,893	-		PfGW456L13_3168	0.32	+1.0
3,548,893	-		PfGW456L13_3168	0.32	-0.4
3,548,908	-		PfGW456L13_3168	0.33	+1.5
3,548,908	-		PfGW456L13_3168	0.33	+0.9
3,548,919	+		PfGW456L13_3168	0.34	+0.9
3,548,920	-		PfGW456L13_3168	0.34	+1.0
3,548,920	-		PfGW456L13_3168	0.34	+0.3
3,548,920	-		PfGW456L13_3168	0.34	-2.2
3,548,920	-		PfGW456L13_3168	0.34	-0.4
3,548,926	+		PfGW456L13_3168	0.34	+0.6
3,548,926	+		PfGW456L13_3168	0.34	-2.3
3,548,926	+		PfGW456L13_3168	0.34	+1.1
3,548,926	+		PfGW456L13_3168	0.34	+0.1
3,548,926	+		PfGW456L13_3168	0.34	+0.8
3,548,927	-		PfGW456L13_3168	0.34	+0.4
3,548,927	-		PfGW456L13_3168	0.34	+2.0
3,548,927	-		PfGW456L13_3168	0.34	-3.2
3,548,927	-		PfGW456L13_3168	0.34	-0.8
3,548,927	-		PfGW456L13_3168	0.34	+1.3
3,548,927	-		PfGW456L13_3168	0.34	+0.4
3,548,928	+		PfGW456L13_3168	0.34	+0.7
3,548,928	+		PfGW456L13_3168	0.34	+1.0
3,548,929	-		PfGW456L13_3168	0.34	-0.2
3,548,929	-		PfGW456L13_3168	0.34	+0.7
3,549,072	+		PfGW456L13_3168	0.45	-0.8
3,549,072	+		PfGW456L13_3168	0.45	+1.8
3,549,073	-		PfGW456L13_3168	0.45	-1.5
3,549,073	-		PfGW456L13_3168	0.45	+1.2
3,549,073	-		PfGW456L13_3168	0.45	+0.0
3,549,073	-		PfGW456L13_3168	0.45	+2.4
3,549,144	+		PfGW456L13_3168	0.50	+1.8
3,549,144	+		PfGW456L13_3168	0.50	-0.6
3,549,145	-		PfGW456L13_3168	0.50	-1.4
3,549,246	+		PfGW456L13_3168	0.58	-3.5
3,549,340	+		PfGW456L13_3168	0.64	+0.6
3,549,416	-		PfGW456L13_3168	0.70	-0.9
3,549,416	-		PfGW456L13_3168	0.70	-0.7
3,549,416	-		PfGW456L13_3168	0.70	-2.0
3,549,457	+		PfGW456L13_3168	0.73	-2.7
3,549,457	+		PfGW456L13_3168	0.73	-2.6
3,549,457	+		PfGW456L13_3168	0.73	+0.2
3,549,457	+		PfGW456L13_3168	0.73	+0.4
3,549,458	-		PfGW456L13_3168	0.73	+1.4
3,549,458	-		PfGW456L13_3168	0.73	-0.4
3,549,513	+		PfGW456L13_3168	0.77	+0.8
3,549,513	+		PfGW456L13_3168	0.77	-1.7
3,549,513	+		PfGW456L13_3168	0.77	+1.1
3,549,513	+		PfGW456L13_3168	0.77	-0.5
3,549,514	-		PfGW456L13_3168	0.77	+0.6
3,549,517	+		PfGW456L13_3168	0.77	+0.6
3,549,517	+		PfGW456L13_3168	0.77	-0.7
3,549,517	+		PfGW456L13_3168	0.77	+2.5
3,549,518	-		PfGW456L13_3168	0.77	-0.7
3,549,518	-		PfGW456L13_3168	0.77	-1.3
3,549,518	-		PfGW456L13_3168	0.77	+1.7
3,549,570	-				+0.8
3,549,626	+		PfGW456L13_3168	0.85	-0.0
3,549,626	+		PfGW456L13_3168	0.85	-0.2
3,549,626	+		PfGW456L13_3168	0.85	+0.9
3,549,626	+		PfGW456L13_3168	0.85	+0.8
3,549,626	+		PfGW456L13_3168	0.85	+1.0
3,549,627	-		PfGW456L13_3168	0.85	-2.2
3,549,627	-		PfGW456L13_3168	0.85	+2.0
3,549,627	-		PfGW456L13_3168	0.85	-1.0
3,549,660	+		PfGW456L13_3168	0.88	+0.6
3,549,660	+		PfGW456L13_3168	0.88	-0.4
3,549,660	+		PfGW456L13_3168	0.88	+0.8
3,549,660	+		PfGW456L13_3168	0.88	+1.4
3,549,661	-		PfGW456L13_3168	0.88	+1.0
3,549,677	-		PfGW456L13_3168	0.89	+1.3
3,549,677	-		PfGW456L13_3168	0.89	-3.2
3,549,710	+				+1.4
3,549,710	+				+1.5
3,549,711	-				+1.5
3,549,711	-				-1.5
3,549,711	-				+0.5
3,549,844	+				+0.0
3,549,950	-		PfGW456L13_3169	0.19	-1.5
3,550,021	+		PfGW456L13_3169	0.30	+0.8
3,550,022	-		PfGW456L13_3169	0.30	-1.3
3,550,022	-		PfGW456L13_3169	0.30	+1.2
3,550,028	+		PfGW456L13_3169	0.31	+0.3
3,550,028	+		PfGW456L13_3169	0.31	-1.2
3,550,028	+		PfGW456L13_3169	0.31	-1.0
3,550,029	-		PfGW456L13_3169	0.31	+0.4
3,550,057	+		PfGW456L13_3169	0.35	+0.4
3,550,057	+		PfGW456L13_3169	0.35	-0.3
3,550,057	+		PfGW456L13_3169	0.35	+0.1
3,550,058	-		PfGW456L13_3169	0.36	-2.9
3,550,058	-		PfGW456L13_3169	0.36	-2.2
3,550,091	+		PfGW456L13_3169	0.41	+0.2
3,550,149	+		PfGW456L13_3169	0.49	-0.5
3,550,150	-		PfGW456L13_3169	0.49	+0.8
3,550,193	-		PfGW456L13_3169	0.56	-2.1
3,550,410	-		PfGW456L13_3169	0.89	+0.1
3,550,411	+		PfGW456L13_3169	0.89	-2.2
3,550,412	-				+1.1
3,550,412	-		PfGW456L13_3169	0.89	-1.4
3,550,412	-		PfGW456L13_3169	0.89	+1.5
3,550,412	-		PfGW456L13_3169	0.89	+2.2
3,550,467	+				-3.5
3,550,468	-				-2.6
3,550,468	-				+0.3
3,550,468	-				+1.3
3,550,473	+				+0.2
3,550,474	-				+1.2
3,550,474	-				+0.7
3,550,476	+				-0.2
3,550,476	+				-0.0
3,550,476	+				+0.8
3,550,626	+		PfGW456L13_3170	0.20	-1.7
3,550,627	-		PfGW456L13_3170	0.20	-0.6
3,550,627	-		PfGW456L13_3170	0.20	+0.8
3,550,642	-		PfGW456L13_3170	0.23	+1.0
3,550,662	+		PfGW456L13_3170	0.26	-2.5
3,550,663	-		PfGW456L13_3170	0.26	+0.8
3,550,663	-		PfGW456L13_3170	0.26	+1.2
3,550,663	-		PfGW456L13_3170	0.26	-0.2
3,550,788	+		PfGW456L13_3170	0.45	+0.5
3,550,788	+		PfGW456L13_3170	0.45	-2.0
3,550,788	+		PfGW456L13_3170	0.45	-3.1
3,550,789	-		PfGW456L13_3170	0.45	+1.0
3,550,789	-		PfGW456L13_3170	0.45	-2.3
3,550,789	-		PfGW456L13_3170	0.45	+1.8
3,550,789	-		PfGW456L13_3170	0.45	+1.7