Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_283 and PfGW456L13_284 are separated by 183 nucleotides PfGW456L13_284 and PfGW456L13_285 are separated by 35 nucleotides PfGW456L13_285 and PfGW456L13_286 are separated by 289 nucleotides
PfGW456L13_283 - NADP-dependent malic enzyme (EC 1.1.1.40), at 332,332 to 333,600
_283
PfGW456L13_284 - Thermonuclease family protein, at 333,784 to 334,572
_284
PfGW456L13_285 - LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent, at 334,608 to 334,826
_285
PfGW456L13_286 - Helicase PriA essential for oriC/DnaA-independent DNA replication, at 335,116 to 337,335
_286
Position (kb) 333
334
335 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 332.900 kb on + strand, within PfGW456L13_283 at 332.900 kb on + strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.984 kb on - strand, within PfGW456L13_283 at 332.984 kb on - strand, within PfGW456L13_283 at 333.138 kb on + strand, within PfGW456L13_283 at 333.317 kb on - strand, within PfGW456L13_283 at 333.425 kb on + strand, within PfGW456L13_283 at 333.425 kb on + strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.431 kb on + strand, within PfGW456L13_283 at 333.570 kb on - strand at 333.619 kb on - strand at 333.741 kb on + strand at 333.931 kb on - strand, within PfGW456L13_284 at 333.968 kb on - strand, within PfGW456L13_284 at 333.968 kb on - strand, within PfGW456L13_284 at 333.982 kb on + strand, within PfGW456L13_284 at 333.983 kb on - strand, within PfGW456L13_284 at 334.079 kb on - strand, within PfGW456L13_284 at 334.235 kb on + strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.534 kb on - strand at 334.534 kb on - strand at 334.657 kb on - strand, within PfGW456L13_285 at 334.950 kb on + strand at 334.950 kb on + strand at 334.950 kb on + strand at 334.951 kb on - strand at 334.951 kb on - strand at 334.951 kb on - strand at 335.020 kb on + strand at 335.020 kb on + strand at 335.020 kb on + strand at 335.021 kb on - strand at 335.021 kb on - strand at 335.021 kb on - strand at 335.090 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 332,900 + PfGW456L13_283 0.45 -2.1 332,900 + PfGW456L13_283 0.45 +0.8 332,901 - PfGW456L13_283 0.45 -1.5 332,901 - PfGW456L13_283 0.45 -1.5 332,901 - PfGW456L13_283 0.45 -0.2 332,901 - PfGW456L13_283 0.45 -2.8 332,954 + PfGW456L13_283 0.49 -1.3 332,954 + PfGW456L13_283 0.49 -2.5 332,954 + PfGW456L13_283 0.49 -0.9 332,954 + PfGW456L13_283 0.49 -2.4 332,954 + PfGW456L13_283 0.49 -2.7 332,954 + PfGW456L13_283 0.49 +0.5 332,954 + PfGW456L13_283 0.49 -1.7 332,954 + PfGW456L13_283 0.49 -0.8 332,954 + PfGW456L13_283 0.49 +1.2 332,954 + PfGW456L13_283 0.49 +0.5 332,954 + PfGW456L13_283 0.49 -1.4 332,955 - PfGW456L13_283 0.49 -0.8 332,955 - PfGW456L13_283 0.49 -0.5 332,955 - PfGW456L13_283 0.49 -1.2 332,955 - PfGW456L13_283 0.49 -0.9 332,955 - PfGW456L13_283 0.49 -0.8 332,955 - PfGW456L13_283 0.49 -2.0 332,984 - PfGW456L13_283 0.51 -0.1 332,984 - PfGW456L13_283 0.51 +0.5 333,138 + PfGW456L13_283 0.64 +0.7 333,317 - PfGW456L13_283 0.78 -3.2 333,425 + PfGW456L13_283 0.86 +1.2 333,425 + PfGW456L13_283 0.86 +0.5 333,426 - PfGW456L13_283 0.86 -0.5 333,426 - PfGW456L13_283 0.86 -1.5 333,426 - PfGW456L13_283 0.86 +0.0 333,426 - PfGW456L13_283 0.86 +0.2 333,426 - PfGW456L13_283 0.86 -1.2 333,431 + PfGW456L13_283 0.87 -1.2 333,570 - +0.5 333,619 - -3.1 333,741 + -2.1 333,931 - PfGW456L13_284 0.19 +0.6 333,968 - PfGW456L13_284 0.23 +1.1 333,968 - PfGW456L13_284 0.23 +1.6 333,982 + PfGW456L13_284 0.25 +0.0 333,983 - PfGW456L13_284 0.25 -1.4 334,079 - PfGW456L13_284 0.37 +1.4 334,235 + PfGW456L13_284 0.57 +1.1 334,236 - PfGW456L13_284 0.57 +2.7 334,236 - PfGW456L13_284 0.57 +0.6 334,236 - PfGW456L13_284 0.57 -0.4 334,236 - PfGW456L13_284 0.57 +2.3 334,534 - +1.9 334,534 - +0.8 334,657 - PfGW456L13_285 0.22 +1.5 334,950 + -1.5 334,950 + -0.6 334,950 + -0.4 334,951 - +2.0 334,951 - -0.1 334,951 - -0.2 335,020 + +0.8 335,020 + +0.8 335,020 + -2.9 335,021 - -1.2 335,021 - -3.0 335,021 - +2.1 335,090 - -1.0
Or see this region's nucleotide sequence