Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1510

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
1,659,068	+		PfGW456L13_1509	0.41	+0.6
1,659,069	-		PfGW456L13_1509	0.41	+1.4
1,659,268	-		PfGW456L13_1509	0.58	-0.0
1,659,318	+		PfGW456L13_1509	0.62	+2.2
1,659,318	+		PfGW456L13_1509	0.62	-1.4
1,659,318	+		PfGW456L13_1509	0.62	-2.4
1,659,318	+		PfGW456L13_1509	0.62	+1.2
1,659,318	+		PfGW456L13_1509	0.62	+2.5
1,659,319	-		PfGW456L13_1509	0.62	+1.1
1,659,319	-		PfGW456L13_1509	0.62	+1.4
1,659,387	+		PfGW456L13_1509	0.67	+0.0
1,659,387	+		PfGW456L13_1509	0.67	+1.8
1,659,387	+		PfGW456L13_1509	0.67	-1.5
1,659,387	+		PfGW456L13_1509	0.67	-3.0
1,659,388	-		PfGW456L13_1509	0.67	-0.8
1,659,388	-		PfGW456L13_1509	0.67	-1.0
1,659,388	-		PfGW456L13_1509	0.67	-2.2
1,659,402	+		PfGW456L13_1509	0.69	-0.1
1,659,403	-		PfGW456L13_1509	0.69	-0.1
1,659,403	-		PfGW456L13_1509	0.69	+0.5
1,659,598	+		PfGW456L13_1509	0.85	+1.6
1,659,598	+		PfGW456L13_1509	0.85	+0.2
1,659,599	-		PfGW456L13_1509	0.85	+0.9
1,659,599	-		PfGW456L13_1509	0.85	-0.7
1,659,753	+				+0.7
1,659,753	+				+0.5
1,659,753	+				+0.8
1,659,753	+				-0.8
1,659,753	+				+0.4
1,659,753	+				-0.9
1,659,753	+				+0.6
1,659,753	+				+0.6
1,659,753	+				+1.7
1,659,753	+				+0.9
1,659,753	+				+0.6
1,659,753	+				+0.4
1,659,753	+				+0.4
1,659,753	+				+1.2
1,659,753	+				+1.8
1,659,753	+				+0.4
1,659,753	+				-0.5
1,659,753	+				-0.7
1,659,753	+				+0.9
1,659,753	+				+0.1
1,659,753	+				+0.4
1,659,753	+				+0.4
1,659,754	-				-0.2
1,659,754	-				+0.5
1,659,754	-				+1.6
1,659,754	-				-0.2
1,659,754	-				-0.4
1,659,754	-				-4.2
1,659,754	-				+0.8
1,659,754	-				+0.1
1,659,754	-				-0.2
1,659,754	-				+1.0
1,659,754	-				+1.3
1,659,754	-				+0.5
1,659,754	-				+0.7
1,659,798	+				-3.2
1,659,818	+				-0.1
1,659,818	+				-3.3
1,659,818	+				+0.8
1,659,818	+				-0.2
1,659,818	+				+0.6
1,659,818	+				-0.9
1,659,819	-				+0.9
1,659,819	-				+0.6
1,659,819	-				+0.3
1,659,819	-				+2.9
1,659,819	-				+1.3
1,659,819	-				-0.3
1,659,820	+				+0.4
1,659,820	+				-0.6
1,659,820	+				+1.2
1,659,820	+				+1.4
1,659,820	+				+0.9
1,659,820	+				-1.3
1,659,821	-				-0.1
1,659,821	-				+0.8
1,659,821	-				-2.2
1,659,821	-				-2.5
1,659,821	-				-0.4
1,659,821	-				+0.2
1,659,825	+				-0.8
1,659,825	+				-0.8
1,659,826	-				+0.6
1,659,826	-				-3.4
1,659,826	-				-0.6
1,659,826	-				+0.4
1,659,826	-				-1.0
1,659,878	+				+1.9
1,659,878	+				+1.2
1,659,878	+				-0.4
1,659,878	+				+1.2
1,659,879	-				+0.2
1,659,879	-				+0.1
1,659,879	-				-1.8
1,659,879	-				+0.0
1,659,882	-				+2.1
1,659,882	-				-1.7
1,659,893	+				+0.1
1,659,896	+				+0.8
1,659,896	+				+1.1
1,659,896	+				-0.3
1,659,896	+				-3.1
1,659,896	+				-0.2
1,659,896	+				+2.6
1,659,896	+				+1.0
1,659,896	+				+0.2
1,659,896	+				+1.0
1,659,897	-				+0.9
1,659,897	-				-1.1
1,659,897	-				-0.9
1,659,897	-				-0.5
1,659,897	-				-1.5
1,659,897	-				+1.4
1,659,897	-				+2.1
1,659,897	-				+0.4
1,659,897	-				+0.0
1,659,900	+				+1.5
1,659,900	+				+1.8
1,659,900	+				+1.2
1,659,900	+				+1.3
1,659,900	+				-0.7
1,659,900	+				+1.1
1,659,901	-				-2.2
1,659,901	-				+0.9
1,659,901	-				+0.0
1,660,009	+				+2.0
1,660,009	+				+0.6
1,660,009	+				-0.4
1,660,009	+				-1.3
1,660,009	+				-0.1
1,660,009	+				+0.4
1,660,009	+				+1.2
1,660,009	+				+1.3
1,660,009	+				+0.2
1,660,009	+				+2.6
1,660,010	-				-0.5
1,660,010	-				+3.0
1,660,010	-				-1.1
1,660,018	+				-0.7
1,660,018	+				+0.2
1,660,018	+				-1.3
1,660,018	+				+0.5
1,660,019	-				-0.5
1,660,019	-				-1.3
1,660,019	-				+1.8
1,660,019	-				+0.4
1,660,032	+				-3.2
1,660,058	+		PfGW456L13_1510	0.11	-1.8
1,660,099	+		PfGW456L13_1510	0.21	-0.2
1,660,099	+		PfGW456L13_1510	0.21	-0.5
1,660,100	-		PfGW456L13_1510	0.21	-2.1
1,660,100	-		PfGW456L13_1510	0.21	-0.9
1,660,100	-		PfGW456L13_1510	0.21	-0.0
1,660,100	-		PfGW456L13_1510	0.21	+2.3
1,660,109	-		PfGW456L13_1510	0.23	-1.1
1,660,267	-		PfGW456L13_1510	0.61	-3.3
1,660,267	-		PfGW456L13_1510	0.61	-1.2
1,660,296	+		PfGW456L13_1510	0.68	-0.5
1,660,296	+		PfGW456L13_1510	0.68	-1.1
1,660,296	+		PfGW456L13_1510	0.68	-0.9
1,660,297	-		PfGW456L13_1510	0.68	-2.1
1,660,297	-		PfGW456L13_1510	0.68	-0.2
1,660,297	-		PfGW456L13_1510	0.68	-0.6
1,660,297	-		PfGW456L13_1510	0.68	-0.7
1,660,297	-		PfGW456L13_1510	0.68	-2.0
1,660,396	+				-2.4
1,660,396	+				-1.6
1,660,396	+				+1.2
1,660,396	+				-0.3
1,660,396	+				-2.7
1,660,396	+				-0.5
1,660,396	+				-2.1
1,660,397	-				-0.9
1,660,397	-				-1.4
1,660,397	-				+0.2
1,660,397	-				-0.2
1,660,397	-				-0.3
1,660,397	-				+2.9
1,660,502	-				-1.9
1,660,670	-				-1.8
1,660,726	-				+1.0
1,660,726	-				-0.7
1,660,731	+				+0.2
1,660,731	+				-0.1
1,660,731	+				-3.2
1,660,732	-				-1.6
1,660,732	-				-1.0
1,660,732	-				+0.3
1,660,732	-				-1.7
1,660,872	+		PfGW456L13_1511	0.39	+1.2
1,660,872	+		PfGW456L13_1511	0.39	-0.5
1,660,873	-		PfGW456L13_1511	0.39	-0.2
1,660,873	-		PfGW456L13_1511	0.39	+0.9
1,660,974	-		PfGW456L13_1511	0.68	+0.8
1,661,086	+				-0.5
1,661,087	-				+1.8
1,661,087	-				-0.8
1,661,140	+				+0.6
1,661,140	+				-3.1
1,661,140	+				+0.9
1,661,140	+				-0.2
1,661,140	+				+0.7
1,661,140	+				-0.5
1,661,141	-				-0.1
1,661,141	-				+2.1
1,661,141	-				-1.0
1,661,141	-				-2.3
1,661,141	-				+0.4
1,661,141	-				-1.2
1,661,141	-				-0.5
1,661,141	-				-3.4
1,661,141	-				+0.6
1,661,141	-				+1.0
1,661,141	-				-0.8
1,661,141	-				-1.7
1,661,179	-				-1.7
1,661,226	+				-2.6
1,661,226	+				-1.8
1,661,226	+				-1.3
1,661,226	+				-1.6
1,661,227	-				-1.5
1,661,227	-				-1.9
1,661,227	-				-0.5
1,661,227	-				-2.2
1,661,232	+				+1.8
1,661,232	+				+1.8
1,661,232	+				-1.0
1,661,232	+				-1.5
1,661,233	-				-0.1
1,661,233	-				-0.9
1,661,233	-				-0.4
1,661,233	-				-0.7
1,661,233	-				-2.6
1,661,289	+				-0.4
1,661,302	+				-0.1
1,661,303	-				+0.9
1,661,303	-				+1.9
1,661,326	+		PfGW456L13_1512	0.13	+1.2
1,661,343	+		PfGW456L13_1512	0.19	-0.1
1,661,343	+		PfGW456L13_1512	0.19	+1.1
1,661,343	+		PfGW456L13_1512	0.19	-0.2
1,661,343	+		PfGW456L13_1512	0.19	-0.7
1,661,343	+		PfGW456L13_1512	0.19	-3.0
1,661,343	+		PfGW456L13_1512	0.19	-0.2
1,661,343	+		PfGW456L13_1512	0.19	-3.4
1,661,344	-		PfGW456L13_1512	0.19	-0.7
1,661,344	-		PfGW456L13_1512	0.19	-3.1
1,661,344	-		PfGW456L13_1512	0.19	+0.9
1,661,344	-		PfGW456L13_1512	0.19	+1.1
1,661,344	-		PfGW456L13_1512	0.19	+1.7
1,661,344	-		PfGW456L13_1512	0.19	-0.2
1,661,344	-		PfGW456L13_1512	0.19	-0.5
1,661,344	-		PfGW456L13_1512	0.19	-0.7
1,661,344	-		PfGW456L13_1512	0.19	+0.7
1,661,344	-		PfGW456L13_1512	0.19	-0.4
1,661,349	+		PfGW456L13_1512	0.21	-0.2
1,661,349	+		PfGW456L13_1512	0.21	+1.5
1,661,349	+		PfGW456L13_1512	0.21	-0.8
1,661,349	+		PfGW456L13_1512	0.21	-0.2
1,661,349	+		PfGW456L13_1512	0.21	-1.2
1,661,349	+		PfGW456L13_1512	0.21	-1.7
1,661,349	+				-0.1
1,661,349	+		PfGW456L13_1512	0.21	+0.2
1,661,349	+		PfGW456L13_1512	0.21	-0.1
1,661,349	+		PfGW456L13_1512	0.21	-0.8
1,661,349	+		PfGW456L13_1512	0.21	+0.1
1,661,349	+		PfGW456L13_1512	0.21	-1.5
1,661,349	+		PfGW456L13_1512	0.21	-3.2
1,661,349	+		PfGW456L13_1512	0.21	+1.0
1,661,349	+		PfGW456L13_1512	0.21	-0.4
1,661,349	+		PfGW456L13_1512	0.21	+0.1
1,661,349	+		PfGW456L13_1512	0.21	-1.1
1,661,350	-		PfGW456L13_1512	0.21	+0.5
1,661,350	-		PfGW456L13_1512	0.21	-1.8
1,661,350	-		PfGW456L13_1512	0.21	+0.2
1,661,350	-		PfGW456L13_1512	0.21	-0.3
1,661,350	-		PfGW456L13_1512	0.21	-2.1
1,661,350	-		PfGW456L13_1512	0.21	+0.8
1,661,350	-		PfGW456L13_1512	0.21	+1.5
1,661,350	-		PfGW456L13_1512	0.21	+0.1
1,661,350	-		PfGW456L13_1512	0.21	-0.1
1,661,350	-		PfGW456L13_1512	0.21	+2.5
1,661,350	-		PfGW456L13_1512	0.21	-1.2
1,661,350	-		PfGW456L13_1512	0.21	+0.5
1,661,350	-		PfGW456L13_1512	0.21	-3.4
1,661,370	+		PfGW456L13_1512	0.28	-3.2
1,661,370	+		PfGW456L13_1512	0.28	+1.1
1,661,370	+		PfGW456L13_1512	0.28	+0.6
1,661,371	-		PfGW456L13_1512	0.28	+1.7
1,661,371	-		PfGW456L13_1512	0.28	-0.6
1,661,421	+		PfGW456L13_1512	0.45	+0.3
1,661,422	-		PfGW456L13_1512	0.46	-1.8