Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_19140 and OH686_19145 are separated by 1 nucleotides OH686_19145 and OH686_19150 are separated by 10 nucleotides OH686_19150 and OH686_19155 overlap by 1 nucleotides OH686_19155 and OH686_19160 overlap by 4 nucleotides
OH686_19140: OH686_19140 - tol-pal system-associated acyl-CoA thioesterase, at 3,951,201 to 3,951,644
_19140
OH686_19145: OH686_19145 - protein TolQ, at 3,951,646 to 3,952,347
_19145
OH686_19150: OH686_19150 - protein TolR, at 3,952,358 to 3,952,816
_19150
OH686_19155: OH686_19155 - protein TolA, at 3,952,816 to 3,953,772
_19155
OH686_19160: OH686_19160 - Tol-Pal system beta propeller repeat protein TolB, at 3,953,769 to 3,955,067
_19160
Position (kb)
3952
3953 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3951.409 kb on - strand, within OH686_19140 at 3951.443 kb on + strand, within OH686_19140 at 3951.444 kb on - strand, within OH686_19140 at 3951.444 kb on - strand, within OH686_19140 at 3951.444 kb on - strand, within OH686_19140 at 3951.444 kb on - strand, within OH686_19140 at 3951.457 kb on + strand, within OH686_19140 at 3951.457 kb on + strand, within OH686_19140 at 3951.458 kb on - strand, within OH686_19140 at 3951.458 kb on - strand, within OH686_19140 at 3951.458 kb on - strand, within OH686_19140 at 3951.458 kb on - strand, within OH686_19140 at 3951.458 kb on - strand, within OH686_19140 at 3951.467 kb on - strand, within OH686_19140 at 3951.467 kb on - strand, within OH686_19140 at 3951.467 kb on - strand, within OH686_19140 at 3951.500 kb on - strand, within OH686_19140 at 3951.500 kb on - strand, within OH686_19140
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 3,951,409 - OH686_19140 0.47 -0.1 3,951,443 + OH686_19140 0.55 +2.8 3,951,444 - OH686_19140 0.55 -0.2 3,951,444 - OH686_19140 0.55 -1.3 3,951,444 - OH686_19140 0.55 +0.9 3,951,444 - OH686_19140 0.55 -0.2 3,951,457 + OH686_19140 0.58 +0.0 3,951,457 + OH686_19140 0.58 +0.3 3,951,458 - OH686_19140 0.58 -1.5 3,951,458 - OH686_19140 0.58 -1.8 3,951,458 - OH686_19140 0.58 -0.4 3,951,458 - OH686_19140 0.58 +0.2 3,951,458 - OH686_19140 0.58 -1.1 3,951,467 - OH686_19140 0.60 -0.3 3,951,467 - OH686_19140 0.60 -1.3 3,951,467 - OH686_19140 0.60 -0.5 3,951,500 - OH686_19140 0.67 +0.3 3,951,500 - OH686_19140 0.67 +0.3
Or see this region's nucleotide sequence