Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_15205 and OH686_15210 are separated by 1 nucleotides OH686_15210 and OH686_15215 are separated by 181 nucleotides
OH686_15205: OH686_15205 - Anhydro-N-acetylmuramic acid kinase , at 3,189,535 to 3,190,626
_15205
OH686_15210: OH686_15210 - Peptidase, M23/M37 family, at 3,190,628 to 3,192,031
_15210
OH686_15215: OH686_15215 - tyrosine--tRNA ligase, at 3,192,213 to 3,193,412
_15215
Position (kb)
3190
3191
3192
3193 Strain fitness (log2 ratio)
-2
-1
0
1 at 3189.692 kb on - strand, within OH686_15205 at 3189.692 kb on - strand, within OH686_15205 at 3189.702 kb on + strand, within OH686_15205 at 3189.702 kb on + strand, within OH686_15205 at 3189.702 kb on + strand, within OH686_15205 at 3189.703 kb on - strand, within OH686_15205 at 3189.703 kb on - strand, within OH686_15205 at 3189.703 kb on - strand, within OH686_15205 at 3189.703 kb on - strand, within OH686_15205 at 3189.703 kb on - strand, within OH686_15205 at 3189.703 kb on - strand, within OH686_15205 at 3189.947 kb on + strand, within OH686_15205 at 3189.947 kb on + strand, within OH686_15205 at 3189.947 kb on + strand, within OH686_15205 at 3189.948 kb on - strand, within OH686_15205 at 3189.948 kb on - strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.255 kb on + strand, within OH686_15205 at 3190.256 kb on - strand, within OH686_15205 at 3190.256 kb on - strand, within OH686_15205 at 3190.256 kb on - strand, within OH686_15205 at 3190.256 kb on - strand, within OH686_15205 at 3190.256 kb on - strand, within OH686_15205 at 3190.256 kb on - strand, within OH686_15205 at 3190.308 kb on + strand, within OH686_15205 at 3190.309 kb on - strand, within OH686_15205 at 3190.483 kb on + strand, within OH686_15205 at 3190.483 kb on + strand, within OH686_15205 at 3190.483 kb on + strand, within OH686_15205 at 3190.483 kb on + strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.484 kb on - strand, within OH686_15205 at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.526 kb on + strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.527 kb on - strand at 3190.554 kb on + strand at 3190.555 kb on - strand at 3190.597 kb on - strand at 3190.617 kb on - strand at 3190.617 kb on - strand at 3190.626 kb on + strand at 3190.627 kb on - strand at 3192.062 kb on - strand at 3192.076 kb on + strand at 3192.092 kb on + strand at 3192.092 kb on + strand at 3192.092 kb on + strand at 3192.093 kb on - strand at 3192.093 kb on - strand at 3192.140 kb on + strand at 3192.140 kb on + strand at 3192.149 kb on + strand at 3192.149 kb on + strand at 3192.149 kb on + strand at 3192.149 kb on + strand at 3192.149 kb on + strand at 3192.149 kb on + strand at 3192.149 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand at 3192.168 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 3,189,692 - OH686_15205 0.14 -0.6 3,189,692 - OH686_15205 0.14 -1.2 3,189,702 + OH686_15205 0.15 +0.2 3,189,702 + OH686_15205 0.15 -1.0 3,189,702 + OH686_15205 0.15 -0.5 3,189,703 - OH686_15205 0.15 -0.4 3,189,703 - OH686_15205 0.15 -0.7 3,189,703 - OH686_15205 0.15 +1.7 3,189,703 - OH686_15205 0.15 -0.8 3,189,703 - OH686_15205 0.15 -0.2 3,189,703 - OH686_15205 0.15 -0.1 3,189,947 + OH686_15205 0.38 -1.2 3,189,947 + OH686_15205 0.38 -0.9 3,189,947 + OH686_15205 0.38 -0.3 3,189,948 - OH686_15205 0.38 -0.4 3,189,948 - OH686_15205 0.38 +0.0 3,190,255 + OH686_15205 0.66 -0.1 3,190,255 + OH686_15205 0.66 -0.0 3,190,255 + OH686_15205 0.66 +0.3 3,190,255 + OH686_15205 0.66 -0.3 3,190,255 + OH686_15205 0.66 -0.5 3,190,255 + OH686_15205 0.66 -0.1 3,190,255 + OH686_15205 0.66 +0.6 3,190,255 + OH686_15205 0.66 -0.5 3,190,256 - OH686_15205 0.66 -0.1 3,190,256 - OH686_15205 0.66 +1.0 3,190,256 - OH686_15205 0.66 -2.0 3,190,256 - OH686_15205 0.66 +0.6 3,190,256 - OH686_15205 0.66 -2.5 3,190,256 - OH686_15205 0.66 -0.1 3,190,308 + OH686_15205 0.71 -1.2 3,190,309 - OH686_15205 0.71 -0.1 3,190,483 + OH686_15205 0.87 -0.8 3,190,483 + OH686_15205 0.87 -0.2 3,190,483 + OH686_15205 0.87 -0.8 3,190,483 + OH686_15205 0.87 -1.1 3,190,484 - OH686_15205 0.87 +0.2 3,190,484 - OH686_15205 0.87 +0.1 3,190,484 - OH686_15205 0.87 -1.3 3,190,484 - OH686_15205 0.87 -0.4 3,190,484 - OH686_15205 0.87 -1.7 3,190,484 - OH686_15205 0.87 -0.1 3,190,484 - OH686_15205 0.87 -1.1 3,190,484 - OH686_15205 0.87 +0.9 3,190,484 - OH686_15205 0.87 -0.1 3,190,526 + -0.8 3,190,526 + -0.4 3,190,526 + -1.2 3,190,526 + -1.2 3,190,526 + -0.3 3,190,526 + -0.3 3,190,526 + +0.2 3,190,526 + +0.7 3,190,526 + -0.3 3,190,526 + -0.6 3,190,526 + -0.5 3,190,526 + -0.2 3,190,526 + +0.4 3,190,526 + -1.8 3,190,526 + -0.0 3,190,526 + +0.8 3,190,526 + +0.4 3,190,526 + +0.6 3,190,526 + +0.4 3,190,526 + -0.2 3,190,526 + +0.0 3,190,526 + +0.7 3,190,527 - +0.0 3,190,527 - +0.1 3,190,527 - -0.5 3,190,527 - +0.1 3,190,527 - -0.8 3,190,527 - -1.3 3,190,527 - -0.8 3,190,527 - -0.7 3,190,527 - +0.4 3,190,527 - -0.5 3,190,527 - -0.4 3,190,527 - -0.5 3,190,527 - -0.2 3,190,527 - -1.7 3,190,527 - -0.6 3,190,527 - -0.6 3,190,527 - -0.6 3,190,554 + -0.1 3,190,555 - +1.3 3,190,597 - +0.1 3,190,617 - -0.6 3,190,617 - -0.7 3,190,626 + +0.3 3,190,627 - +0.1 3,192,062 - +0.1 3,192,076 + -1.7 3,192,092 + -2.6 3,192,092 + -0.4 3,192,092 + -1.1 3,192,093 - -0.3 3,192,093 - -0.4 3,192,140 + -0.1 3,192,140 + -0.3 3,192,149 + +0.3 3,192,149 + +0.4 3,192,149 + +0.7 3,192,149 + -0.1 3,192,149 + +1.1 3,192,149 + +1.2 3,192,149 + -0.7 3,192,168 + +0.9 3,192,168 + -0.2 3,192,168 + +0.7 3,192,168 + -2.1 3,192,168 + -0.4 3,192,168 + +0.6 3,192,168 + -0.5 3,192,168 + +0.6
Or see this region's nucleotide sequence